Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.C0BXE8 Arachis hypogaea HOM05D007113 ORTHO05D008859 7.8e-50 200.3 111 100.0
arahy.Tifrunner.gnm1.ann1.CDY6H8 Arachis hypogaea HOM05D007113 ORTHO05D008859 2.4e-46 188.7 111 93.7
Haze_17209 Corylus avellana HOM05D007113 ORTHO05D008859 8.4e-20 100.5 100 67.0
Dinv34405 Davidia involucrata HOM05D007113 ORTHO05D008859 8.4e-20 100.5 97 55.7
QL08p062975 Quercus lobata HOM05D007113 ORTHO05D008859 4.6e-18 94.7 95 65.3
VMungo1127G1807 Vigna mungo HOM05D007113 ORTHO05D008859 6.0e-18 94.4 76 68.4
Haze_20976 Corylus avellana HOM05D007113 ORTHO05D008859 1.3e-17 93.2 85 57.6
Phvul.004G171400 Phaseolus vulgaris HOM05D007113 ORTHO05D008859 1.3e-17 93.2 76 67.1
CSS0048161 Camellia sinensis var. sinensis HOM05D007113 ORTHO05D008859 1.8e-17 92.8 96 56.2
Glyma.03G063200 Glycine max HOM05D007113 ORTHO05D008859 3.9e-17 91.7 90 57.8
PGR004G1045 Punica granatum HOM05D007113 ORTHO05D008859 5.1e-17 91.3 87 51.7
ATR0618G049 Amborella trichopoda HOM05D007113 ORTHO05D008859 6.7e-17 90.9 85 57.6
Migut.F01372 Erythranthe guttata HOM05D007113 ORTHO05D008859 8.7e-17 90.5 106 49.1
Ciclev10013049m.g Citrus clementina HOM05D007113 ORTHO05D008859 1.5e-16 89.7 94 50.0
Gohir.A01G226400 Gossypium hirsutum HOM05D007113 ORTHO05D008859 1.9e-16 89.4 87 49.4
Gohir.D01G216000 Gossypium hirsutum HOM05D007113 ORTHO05D008859 1.9e-16 89.4 87 49.4
Gorai.002G262200 Gossypium raimondii HOM05D007113 ORTHO05D008859 1.9e-16 89.4 87 49.4
MD12G1164000 Malus domestica HOM05D007113 ORTHO05D008859 1.9e-16 89.4 85 52.9
Phvul.010G003200 Phaseolus vulgaris HOM05D007113 ORTHO05D008859 1.9e-16 89.4 77 66.2
Glyma.01G114800 Glycine max HOM05D007113 ORTHO05D008859 2.5e-16 89.0 76 65.8
Lsat_1_v5_gn_2_121221 Lactuca sativa HOM05D007113 ORTHO05D008859 2.5e-16 89.0 98 53.1
Nn8g40109 Nelumbo nucifera HOM05D007113 ORTHO05D008859 2.5e-16 89.0 86 53.5
SalBow6G1146 Salvia bowleyana HOM05D007113 ORTHO05D008859 2.5e-16 89.0 82 53.7
MD04G1149600 Malus domestica HOM05D007113 ORTHO05D008859 4.3e-16 88.2 84 53.6
FAN09G0121 Fragaria x ananassa HOM05D007113 ORTHO05D008859 7.4e-16 87.4 85 50.6
FAN14G1367 Fragaria x ananassa HOM05D007113 ORTHO05D008859 7.4e-16 87.4 85 50.6
Lj3g0022517 Lotus japonicus HOM05D007113 ORTHO05D008859 7.4e-16 87.4 70 62.9
GSVIVG01033979001 Vitis vinifera HOM05D007113 ORTHO05D008859 7.4e-16 87.4 86 53.5
Atru.chr8.2216 Acer truncatum HOM05D007113 ORTHO05D008859 9.7e-16 87.0 95 47.4
CAN.G503.7 Capsicum annuum HOM05D007113 ORTHO05D008859 9.7e-16 87.0 103 49.5
CANSAT35G0395 Cannabis sativa HOM05D007113 ORTHO05D008859 1.3e-15 86.7 89 48.3
Lalb_Chr07g0193491 Lupinus albus HOM05D007113 ORTHO05D008859 1.3e-15 86.7 62 62.9
Sc11g0007190 Simmondsia chinensis HOM05D007113 ORTHO05D008859 1.3e-15 86.7 83 56.6
SGA_v2.0_scaffold20G09268 Striga asiatica HOM05D007113 ORTHO05D008859 1.3e-15 86.7 66 62.1
TWI77G0060 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 1.3e-15 86.7 86 54.7
FvH4_6g11730 Fragaria vesca HOM05D007113 ORTHO05D008859 1.6e-15 86.3 85 50.6
Oeu028599.1 Olea europaea HOM05D007113 ORTHO05D008859 2.2e-15 85.9 91 49.5
CDE03G0108 Ceratophyllum demersum HOM05D007113 ORTHO05D008859 2.8e-15 85.5 84 53.6
Peaxi162Scf00957g00229 Petunia axillaris HOM05D011221 ORTHO05D013370 2.8e-15 85.5 95 52.6
RcHm_v2.0_Chr3g0463511 Rosa chinensis HOM05D007113 ORTHO05D008859 2.8e-15 85.5 85 50.6
TWI74G0516 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 2.8e-15 85.5 86 52.3
Eucgr.K02991 Eucalyptus grandis HOM05D007113 ORTHO05D008859 3.7e-15 85.1 78 57.7
FAN05G2893 Fragaria x ananassa HOM05D007113 ORTHO05D008859 3.7e-15 85.1 84 50.0
Hma1.2p1_0362F.1_g136060 Hydrangea macrophylla HOM05D007113 ORTHO05D008859 4.8e-15 84.7 86 51.2
Lsat_1_v5_gn_9_63261 Lactuca sativa HOM05D007113 ORTHO05D008859 4.8e-15 84.7 95 49.5
Cfa017230 Carpinus fangiana HOM05D007113 ORTHO05D008859 6.3e-15 84.3 56 67.9
Cc02_g06720 Coffea canephora HOM05D007113 ORTHO05D008859 6.3e-15 84.3 57 70.2
HanXRQChr14g0460151 Helianthus annuus HOM05D007113 ORTHO05D008859 8.2e-15 84.0 100 51.0
THA.LOC104805827 Tarenaya hassleriana HOM05D007113 ORTHO05D008859 8.2e-15 84.0 87 49.4
TAR623G1648 Trochodendron aralioides HOM05D007113 ORTHO05D008859 8.2e-15 84.0 82 56.1
ECA238G3418 Erigeron canadensis HOM05D007113 ORTHO05D008859 1.1e-14 83.6 100 49.0
Duzib093G1147 Durio zibethinus HOM05D007113 ORTHO05D008859 1.4e-14 83.2 60 58.3
Nitab4.5_0008493g0040 Nicotiana tabacum HOM05D007113 ORTHO05D008859 1.4e-14 83.2 107 49.5
arahy.Tifrunner.gnm1.ann1.J29A80 Arachis hypogaea HOM05D007113 ORTHO05D008859 1.8e-14 82.8 98 50.0
CDE04G2391 Ceratophyllum demersum HOM05D007113 ORTHO05D008859 1.8e-14 82.8 84 51.2
Nitab4.5_0000802g0080 Nicotiana tabacum HOM05D007113 ORTHO05D008859 1.8e-14 82.8 95 51.6
COL.COLO4_14561 Corchorus olitorius HOM05D007113 ORTHO05D008859 2.4e-14 82.4 87 48.3
DCAR_028817 Daucus carota HOM05D007113 ORTHO05D008859 2.4e-14 82.4 94 46.8
Nitab4.5_0004338g0130 Nicotiana tabacum HOM05D007113 ORTHO05D008859 2.4e-14 82.4 101 47.5
Solyc05g052710.3 Solanum lycopersicum HOM05D007113 ORTHO05D008859 2.4e-14 82.4 76 56.6
PGSC0003DMG400027129 Solanum tuberosum HOM05D007113 ORTHO05D008859 2.4e-14 82.4 96 53.1
Thecc.05G019300 Theobroma cacao HOM05D007113 ORTHO05D008859 2.4e-14 82.4 59 59.3
unitig_62.g23930 Utricularia gibba HOM05D000230 ORTHO05D000176 2.4e-14 82.4 86 52.3
Psat7g246120 Pisum sativum HOM05D007113 ORTHO05D008859 3.1e-14 82.0 76 53.9
Actinidia29691 Actinidia chinensis HOM05D007113 ORTHO05D008859 4.1e-14 81.6 58 63.8
Ah.16g103370 Amaranthus hybridus HOM05D007113 ORTHO05D008859 4.1e-14 81.6 78 59.0
arahy.Tifrunner.gnm1.ann1.62SCQ6 Arachis hypogaea HOM05D007113 ORTHO05D008859 4.1e-14 81.6 53 69.8
Sopen05g031230 Solanum pennellii HOM05D007113 ORTHO05D008859 4.1e-14 81.6 96 53.1
ClCG04G007070 Citrullus lanatus HOM05D007113 ORTHO05D008859 9.0e-14 80.5 73 53.4
Potri.016G113700 Populus trichocarpa HOM05D007113 ORTHO05D008859 9.0e-14 80.5 73 53.4
EL10Ac2g04810 Beta vulgaris HOM05D007113 ORTHO05D008859 1.2e-13 80.1 56 69.6
Manes.08G090600 Manihot esculenta HOM05D007113 ORTHO05D008859 1.2e-13 80.1 55 65.5
Aa31sc189G20 Aethionema arabicum HOM05D007113 ORTHO05D008859 1.5e-13 79.7 86 45.3
Aqoxy4G02617 Aquilegia oxysepala HOM05D007113 ORTHO05D008859 1.5e-13 79.7 104 48.1
CARHR132730 Cardamine hirsuta HOM05D007113 ORTHO05D008859 2.0e-13 79.3 96 43.8
FAN14G0869 Fragaria x ananassa HOM05D008730 ORTHO05D010922 2.0e-13 79.3 58 58.6
Medtr4g015540 Medicago truncatula HOM05D007113 ORTHO05D008859 2.0e-13 79.3 76 52.6
Sed0004762 Sechium edule HOM05D007113 ORTHO05D008859 2.6e-13 79.0 80 47.5
AT2G38140 Arabidopsis thaliana HOM05D007113 ORTHO05D008859 3.4e-13 78.6 94 43.6
C04p09540 Brassica napus HOM05D007113 ORTHO05D008859 3.4e-13 78.6 88 45.5
BolC4t22560H Brassica oleracea HOM05D007113 ORTHO05D008859 3.4e-13 78.6 88 45.5
BraA05t19755Z Brassica rapa HOM05D007113 ORTHO05D008859 3.4e-13 78.6 67 53.7
PSO384G2929 Papaver somniferum HOM05D007113 ORTHO05D008859 3.4e-13 78.6 74 54.1
PSO339G1456 Papaver somniferum HOM05D007113 ORTHO05D008859 4.5e-13 78.2 74 54.1
MELO3C003245.2 Cucumis melo HOM05D007113 ORTHO05D008859 5.9e-13 77.8 73 52.1
CsaV3_4G026180 Cucumis sativus L. HOM05D007113 ORTHO05D008859 7.6e-13 77.4 73 53.4
Hund23901 Selenicereus undatus HOM05D007113 ORTHO05D008859 1.0e-12 77.0 72 59.7
FAN02G3283 Fragaria x ananassa HOM05D008730 ORTHO05D008859 1.3e-12 76.6 105 42.9
SGA_v2.0_scaffold78G25464 Striga asiatica HOM05D007113 ORTHO05D008859 1.3e-12 76.6 97 47.4
TPR.G13351 Trifolium pratense HOM05D007113 ORTHO05D008859 1.3e-12 76.6 60 56.7
Ca_20298_v3 Cicer arietinum L. HOM05D007113 ORTHO05D008859 1.7e-12 76.3 78 51.3
CiPaw.10G155700 Carya illinoinensis HOM05D007113 ORTHO05D008859 2.2e-12 75.9 58 60.3
Lsat_1_v5_gn_9_63281 Lactuca sativa HOM05D005832 ORTHO05D007117 2.2e-12 75.9 85 50.6
Oeu025646.1 Olea europaea HOM05D007113 ORTHO05D008859 3.8e-12 75.1 68 52.9
A05p07890 Brassica napus HOM05D007113 ORTHO05D008859 5.0e-12 74.7 87 46.0
HPP92_019871 Vanilla planifolia HOM05D007113 ORTHO05D008859 1.4e-11 73.2 77 50.6
TWI53G1153 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 2.5e-11 72.4 81 55.6
vmacro06980 Vaccinium macrocarpon HOM05D007113 ORTHO05D008859 7.2e-11 70.9 100 43.0
SEGI_38672 Sequoiadendron giganteum HOM05D007113 ORTHO05D008859 1.2e-10 70.1 68 52.9
SEGI_10938 Sequoiadendron giganteum HOM05D007113 ORTHO05D008859 2.7e-10 68.9 68 51.5
Zm00001eb144250 Zea mays HOM05D007113 ORTHO05D008859 1.0e-09 67.0 58 53.4
Os05g0186000 Oryza sativa ssp. japonica HOM05D007113 ORTHO05D008859 1.4e-09 66.6 58 53.4
AagrBONN_evm.TU.Sc2ySwM_362.1890 Anthoceros agrestis HOM05D007113 ORTHO05D008859 3.9e-09 65.1 54 59.3
Sp4g20460 Schrenkiella parvula HOM05D007113 ORTHO05D008859 6.7e-09 64.3 78 55.1
Rhsim03G0141800 Rhododendron simsii HOM05D007113 ORTHO05D008859 1.1e-08 63.5 119 42.9
Mapoly0005s0194 Marchantia polymorpha HOM05D007113 ORTHO05D008859 1.9e-08 62.8 77 45.5
Thhalv10017376m.g Eutrema salsugineum HOM05D007113 ORTHO05D008859 7.4e-08 60.8 87 49.4
AL4G35140 Arabidopsis lyrata HOM05D007113 ORTHO05D008859 1.3e-07 60.1 94 44.7
Pp3c9_12290 Physcomitrium patens HOM05D007113 ORTHO05D008859 3.7e-07 58.5 55 58.2
Carub.0004s2011 Capsella rubella HOM05D007113 ORTHO05D008859 6.3e-07 57.8 94 42.6
Gohir.A03G200700 Gossypium hirsutum HOM05D007135 ORTHO05D008880 6.9e-06 54.3 48 60.4
Pp3c15_12810 Physcomitrium patens HOM05D007113 ORTHO05D008859 6.9e-06 54.3 39 66.7
SalBow6G3736 Salvia bowleyana HOM05D007135 ORTHO05D008880 6.9e-06 54.3 44 61.4
Gorai.005G250000 Gossypium raimondii HOM05D007135 ORTHO05D008880 9.1e-06 53.9 48 60.4


User provided reference genes

Program Settings