Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.BYQL86 Arachis hypogaea HOM05D004915 ORTHO05D006048 2.1e-143 512.3 251 100.0
Lj1g0024391 Lotus japonicus HOM05D004915 ORTHO05D006048 8.9e-118 427.2 249 81.5
Glyma.09G236600 Glycine max HOM05D004915 ORTHO05D006048 4.4e-117 424.9 249 81.5
Lalb_Chr23g0265041 Lupinus albus HOM05D004915 ORTHO05D006048 6.4e-116 421.0 247 80.6
Phvul.008G037200 Phaseolus vulgaris HOM05D004915 ORTHO05D006048 3.5e-114 415.2 249 77.9
VMungo1383G0755 Vigna mungo HOM05D004915 ORTHO05D006048 6.0e-114 414.5 249 78.3
TPR.G33578 Trifolium pratense HOM05D004915 ORTHO05D006048 1.0e-113 413.7 251 77.3
Medtr1g111380 Medicago truncatula HOM05D004915 ORTHO05D006048 1.3e-113 413.3 251 77.3
Psat3g200280 Pisum sativum HOM05D004915 ORTHO05D006048 6.6e-113 411.0 251 77.3
TPR.G39201 Trifolium pratense HOM05D004915 ORTHO05D006048 1.5e-112 409.8 251 76.1
Ca_02901_v3 Cicer arietinum L. HOM05D004915 ORTHO05D006048 9.5e-112 407.1 249 78.7
Medtr7g011040 Medicago truncatula HOM05D004915 ORTHO05D006048 1.2e-111 406.8 246 77.2
Sabra17G0075000 Salix brachista HOM05D004915 ORTHO05D006048 1.1e-99 367.1 243 71.6
Potri.017G085100 Populus trichocarpa HOM05D004915 ORTHO05D006048 4.2e-99 365.2 243 70.4
Ciclev10012474m.g Citrus clementina HOM05D004915 ORTHO05D006048 5.4e-99 364.8 243 69.1
QL10p017218 Quercus lobata HOM05D004915 ORTHO05D006048 5.4e-99 364.8 240 70.4
TWI34G1631 Tripterygium wilfordii HOM05D004915 ORTHO05D006048 7.1e-99 364.4 243 68.7
Cfa018930 Carpinus fangiana HOM05D004915 ORTHO05D006048 1.6e-98 363.2 246 67.5
AL5G18870 Arabidopsis lyrata HOM05D004915 ORTHO05D006048 2.1e-98 362.8 243 67.1
BolC7t44312H Brassica oleracea HOM05D004915 ORTHO05D006048 2.7e-98 362.5 244 66.8
TAR622G0868 Trochodendron aralioides HOM05D004915 ORTHO05D006048 1.0e-97 360.5 240 69.2
PSO478G3309 Papaver somniferum HOM05D004915 ORTHO05D006048 1.3e-97 360.1 240 67.9
BraA06t26934Z Brassica rapa HOM05D004915 ORTHO05D006048 6.6e-97 357.8 243 67.1
HanXRQChr08g0236601 Helianthus annuus HOM05D004915 ORTHO05D006048 6.6e-97 357.8 240 70.4
Manes.01G092400 Manihot esculenta HOM05D004915 ORTHO05D006048 8.7e-97 357.5 243 68.3
CAN.G199.5 Capsicum annuum HOM05D004915 ORTHO05D006048 1.5e-96 356.7 238 69.3
HanXRQChr09g0247201 Helianthus annuus HOM05D004915 ORTHO05D006048 1.5e-96 356.7 246 69.1
Rhsim08G0070400 Rhododendron simsii HOM05D004915 ORTHO05D006048 1.5e-96 356.7 247 66.8
Lj5C110T19 Lonicera japonica HOM05D004915 ORTHO05D006048 1.9e-96 356.3 241 68.5
Thecc.03G090400 Theobroma cacao HOM05D004915 ORTHO05D006048 1.9e-96 356.3 240 67.1
BcaC06g33662 Brassica carinata HOM05D004915 ORTHO05D006048 2.5e-96 355.9 244 66.0
C07p37910 Brassica napus HOM05D004915 ORTHO05D006048 2.5e-96 355.9 244 66.0
Atru.chr8.192 Acer truncatum HOM05D004915 ORTHO05D006048 3.3e-96 355.5 247 67.2
Sp2g17640 Schrenkiella parvula HOM05D004915 ORTHO05D006048 3.3e-96 355.5 248 65.3
Aa31LG2G4180 Aethionema arabicum HOM05D004915 ORTHO05D006048 4.3e-96 355.1 249 65.1
Carub.0005s0760 Capsella rubella HOM05D004915 ORTHO05D006048 4.3e-96 355.1 240 66.7
Duzib205G1074 Durio zibethinus HOM05D004915 ORTHO05D006048 4.3e-96 355.1 240 67.5
Eucgr.B00520 Eucalyptus grandis HOM05D004915 ORTHO05D006048 4.3e-96 355.1 249 65.5
A06p40200 Brassica napus HOM05D004915 ORTHO05D006048 5.6e-96 354.8 243 66.3
Dinv37673 Davidia involucrata HOM05D004915 ORTHO05D006048 5.6e-96 354.8 244 67.2
Solyc06g065310.3 Solanum lycopersicum HOM05D004915 ORTHO05D006048 7.3e-96 354.4 242 67.8
Actinidia38781 Actinidia chinensis HOM05D004915 ORTHO05D006048 1.3e-95 353.6 251 65.3
Aa31LG9G16420 Aethionema arabicum HOM05D004915 ORTHO05D006048 1.3e-95 353.6 248 67.3
Sp7g02320 Schrenkiella parvula HOM05D004915 ORTHO05D006048 1.3e-95 353.6 240 67.5
GSVIVG01007990001 Vitis vinifera HOM05D004915 ORTHO05D006048 1.3e-95 353.6 240 67.5
Thhalv10005292m.g Eutrema salsugineum HOM05D004915 ORTHO05D006048 1.6e-95 353.2 243 66.7
MD14G1201800 Malus domestica HOM05D004915 ORTHO05D006048 1.6e-95 353.2 246 65.9
Sopen06g023800 Solanum pennellii HOM05D004915 ORTHO05D006048 1.6e-95 353.2 242 66.9
MD06G1194800 Malus domestica HOM05D004915 ORTHO05D006048 2.8e-95 352.4 246 66.3
RcHm_v2.0_Chr7g0181591 Rosa chinensis HOM05D004915 ORTHO05D006048 2.8e-95 352.4 241 68.0
BolC4t26193H Brassica oleracea HOM05D004915 ORTHO05D006048 4.8e-95 351.7 240 67.1
Cpa.g.sc179.53 Carica papaya HOM05D004915 ORTHO05D006048 4.8e-95 351.7 244 68.4
CiPaw.11G045800 Carya illinoinensis HOM05D004915 ORTHO05D006048 1.1e-94 350.5 240 67.9
BraA04t16903Z Brassica rapa HOM05D004915 ORTHO05D006048 1.4e-94 350.1 240 66.2
CARHR152100 Cardamine hirsuta HOM05D004915 ORTHO05D006048 1.4e-94 350.1 243 63.4
Prupe.5G195000 Prunus persica HOM05D004915 ORTHO05D006048 1.4e-94 350.1 243 66.3
A04p12400 Brassica napus HOM05D004915 ORTHO05D006048 1.8e-94 349.7 240 66.2
ECA246G2050 Erigeron canadensis HOM05D004915 ORTHO05D006048 1.8e-94 349.7 240 67.9
Migut.L00264 Erythranthe guttata HOM05D004915 ORTHO05D006048 3.1e-94 349.0 244 66.4
Lj4A111T68 Lonicera japonica HOM05D004915 ORTHO05D006048 4.0e-94 348.6 261 62.8
PGSC0003DMG400026111 Solanum tuberosum HOM05D004915 ORTHO05D006048 4.0e-94 348.6 238 66.8
Peaxi162Scf00241g00416 Petunia axillaris HOM05D004915 ORTHO05D006048 5.3e-94 348.2 240 67.5
C04p46080 Brassica napus HOM05D004915 ORTHO05D006048 6.9e-94 347.8 240 65.8
Haze_07314 Corylus avellana HOM05D004915 ORTHO05D006048 6.9e-94 347.8 281 59.1
FAN10G0297 Fragaria x ananassa HOM05D004915 ORTHO05D006048 9.0e-94 347.4 240 67.1
Hma1.2p1_0060F.1_g033670 Hydrangea macrophylla HOM05D004915 ORTHO05D006048 1.2e-93 347.1 240 66.7
CSS0019190 Camellia sinensis var. sinensis HOM05D004915 ORTHO05D006048 1.5e-93 346.7 243 67.5
FvH4_7g07490 Fragaria vesca HOM05D004915 ORTHO05D006048 1.5e-93 346.7 240 67.5
CARHR262560 Cardamine hirsuta HOM05D004915 ORTHO05D006048 2.6e-93 345.9 240 66.2
FAN03G1016 Fragaria x ananassa HOM05D004915 ORTHO05D006048 3.4e-93 345.5 240 67.1
Nn4g23203 Nelumbo nucifera HOM05D004915 ORTHO05D006048 3.4e-93 345.5 237 65.4
Actinidia38763 Actinidia chinensis HOM05D004915 ORTHO05D006048 4.4e-93 345.1 261 62.8
Aqoxy3G03429 Aquilegia oxysepala HOM05D004915 ORTHO05D006048 4.4e-93 345.1 248 63.7
Thhalv10027886m.g Eutrema salsugineum HOM05D004915 ORTHO05D006048 4.4e-93 345.1 243 65.4
Nitab4.5_0000121g0120 Nicotiana tabacum HOM05D004915 ORTHO05D006048 9.9e-93 344.0 240 64.6
Carub.0007s3626 Capsella rubella HOM05D004915 ORTHO05D006048 2.2e-92 342.8 243 65.0
MBI05_g33757_MAGBIO Magnolia biondii HOM05D004915 ORTHO05D006048 4.9e-92 341.7 241 66.8
MSTRG.15680 Avicennia marina HOM05D004915 ORTHO05D006048 8.4e-92 340.9 243 65.0
COL.COLO4_22946 Corchorus olitorius HOM05D004915 ORTHO05D006048 1.1e-91 340.5 233 66.5
FAN04G1144 Fragaria x ananassa HOM05D004915 ORTHO05D006048 1.1e-91 340.5 243 66.7
Cc04_g16470 Coffea canephora HOM05D004915 ORTHO05D006048 1.9e-91 339.7 243 66.3
FAN08G1694 Fragaria x ananassa HOM05D004915 ORTHO05D006048 1.9e-91 339.7 243 66.3
FAN18G3490 Fragaria x ananassa HOM05D004915 ORTHO05D006048 1.9e-91 339.7 243 66.3
ClCG04G012190 Citrullus lanatus HOM05D004915 ORTHO05D006048 2.4e-91 339.3 240 67.1
MELO3C001989.2 Cucumis melo HOM05D004915 ORTHO05D006048 2.4e-91 339.3 240 67.1
FvH4_5g14790 Fragaria vesca HOM05D004915 ORTHO05D006048 2.4e-91 339.3 243 66.3
CsaV3_1G005570 Cucumis sativus L. HOM05D004915 ORTHO05D006048 3.2e-91 339.0 240 67.1
Oeu058311.1 Olea europaea HOM05D004915 ORTHO05D006048 4.2e-91 338.6 243 65.4
AUR62021031 Chenopodium quinoa HOM05D004915 ORTHO05D006048 9.3e-91 337.4 240 65.8
Oeu037787.1 Olea europaea HOM05D004915 ORTHO05D006048 9.3e-91 337.4 255 63.5
SGA_v2.0_scaffold17G08101 Striga asiatica HOM05D004915 ORTHO05D006048 9.3e-91 337.4 241 67.6
FAN13G2234 Fragaria x ananassa HOM05D004915 ORTHO05D006048 1.2e-90 337.0 243 65.8
TAR374G0666 Trochodendron aralioides HOM05D004915 ORTHO05D006048 1.2e-90 337.0 213 71.8
CANSAT56G1541 Cannabis sativa HOM05D004915 ORTHO05D006048 2.7e-90 335.9 237 63.7
Lsat_1_v5_gn_9_27040 Lactuca sativa HOM05D004915 ORTHO05D006048 4.6e-90 335.1 240 66.7
AUR62018412 Chenopodium quinoa HOM05D004915 ORTHO05D006048 1.7e-89 333.2 238 65.1
Hund02640 Selenicereus undatus HOM05D004915 ORTHO05D006048 2.3e-89 332.8 240 62.5
MBI05_g35466_MAGBIO Magnolia biondii HOM05D004915 ORTHO05D006048 3.9e-89 332.0 255 63.1
HPP92_002574 Vanilla planifolia HOM05D004915 ORTHO05D006048 4.3e-88 328.6 238 63.0
HPP92_002576 Vanilla planifolia HOM05D004915 ORTHO05D006048 4.3e-88 328.6 238 63.0
Zm00001eb211140 Zea mays HOM05D004915 ORTHO05D006048 7.3e-88 327.8 241 64.3
DCAR_015957 Daucus carota HOM05D004915 ORTHO05D006048 8.1e-87 324.3 243 62.1
EL10Ac3g07299 Beta vulgaris HOM05D004915 ORTHO05D006048 1.1e-86 323.9 289 55.7
Os08g0435800 Oryza sativa ssp. japonica HOM05D004915 ORTHO05D006048 3.1e-86 322.4 243 63.0
Peaxi162Scf00106g00016 Petunia axillaris HOM05D004915 ORTHO05D006048 1.5e-85 320.1 269 57.6
PGR083G1377 Punica granatum HOM05D004915 ORTHO05D006048 1.3e-84 317.0 218 67.4
CSS0012692 Camellia sinensis var. sinensis HOM05D004915 ORTHO05D006048 1.4e-83 313.5 243 62.6
THA.LOC104825807 Tarenaya hassleriana HOM05D004915 ORTHO05D006048 1.2e-82 310.5 265 58.5
SEGI_18610 Sequoiadendron giganteum HOM05D004915 ORTHO05D006048 1.1e-78 297.4 218 61.9
BcaB06g27359 Brassica carinata HOM05D004915 ORTHO05D006048 2.4e-78 296.2 245 59.2
AT3G29010 Arabidopsis thaliana HOM05D004915 ORTHO05D006048 5.8e-77 291.6 189 70.4
PGR031G1409 Punica granatum HOM05D004915 ORTHO05D006048 4.9e-76 288.5 199 66.8
Sc04g0002730 Simmondsia chinensis HOM05D004915 ORTHO05D006048 8.4e-76 287.7 169 78.1
Sed0011950 Sechium edule HOM05D004915 ORTHO05D006048 3.0e-73 279.3 177 72.9
Gorai.001G074400 Gossypium raimondii HOM05D004915 ORTHO05D006048 9.6e-72 274.2 196 62.8
Gohir.D07G070500 Gossypium hirsutum HOM05D004915 ORTHO05D006048 2.8e-71 272.7 196 62.8
Pp3c2_33530 Physcomitrium patens HOM05D004915 ORTHO05D006048 9.0e-70 267.7 244 53.3
CSS0012742 Camellia sinensis var. sinensis HOM05D004915 ORTHO05D006048 6.5e-68 261.5 243 53.5
Mapoly0106s0015 Marchantia polymorpha HOM05D004915 ORTHO05D006048 6.5e-68 261.5 242 50.4
Actinidia26226 Actinidia chinensis HOM05D004915 ORTHO05D006048 4.6e-66 255.4 244 52.9
AagrBONN_evm.TU.Sc2ySwM_344.3958 Anthoceros agrestis HOM05D004915 ORTHO05D006048 7.9e-66 254.6 225 51.1
SMO119G0486 Selaginella moellendorffii HOM05D004915 ORTHO05D006048 6.7e-65 251.5 238 49.2
ATR0626G227 Amborella trichopoda HOM05D004915 ORTHO05D006048 1.5e-64 250.4 192 58.9
AagrBONN_evm.TU.Sc2ySwM_362.689 Anthoceros agrestis HOM05D004915 ORTHO05D006048 2.5e-59 233.0 177 58.8
HPP92_002578 Vanilla planifolia HOM05D006076 ORTHO05D007871 2.0e-56 223.4 238 47.9
AagrBONN_evm.TU.Sc2ySwM_362.690 Anthoceros agrestis HOM05D004915 ORTHO05D006048 4.3e-56 222.2 168 59.5
MCO14G534 Micromonas commoda HOM05D004915 ORTHO05D006048 2.2e-55 219.9 229 49.8
QL06p014871 Quercus lobata HOM05D004915 ORTHO05D006048 4.1e-54 215.7 129 73.6
Cre01.g053750 Chlamydomonas reinhardtii HOM05D004915 ORTHO05D006048 5.3e-54 215.3 210 51.4
HanXRQChr14g0437411 Helianthus annuus HOM05D004915 ORTHO05D006048 4.7e-50 202.2 128 74.2
unitig_60.g25520 Utricularia gibba HOM05D004915 ORTHO05D006048 9.7e-48 194.5 252 43.7
HanXRQChr13g0408591 Helianthus annuus HOM05D004915 ORTHO05D006048 2.2e-47 193.4 126 72.2
vmacro05688 Vaccinium macrocarpon HOM05D004915 ORTHO05D006048 4.1e-46 189.1 144 60.4
Gohir.A07G066000 Gossypium hirsutum HOM05D004915 ORTHO05D006048 5.0e-44 182.2 135 59.3
SMO164G0178 Selaginella moellendorffii HOM05D004915 ORTHO05D006048 5.0e-44 182.2 222 42.3
vmacro18186 Vaccinium macrocarpon HOM05D004915 ORTHO05D006048 5.2e-41 172.2 197 47.7
Nitab4.5_0004528g0010 Nicotiana tabacum HOM05D004915 ORTHO05D006048 6.7e-41 171.8 275 36.7
CBR_g58409 Chara braunii HOM05D004915 ORTHO05D006048 7.5e-40 168.3 128 57.8
PRCOL_00000090 Prasinoderma coloniale HOM05D004915 ORTHO05D006048 7.5e-40 168.3 255 35.7
DCAR_026059 Daucus carota HOM05D004915 ORTHO05D006048 3.7e-39 166.0 122 58.2
Nitab4.5_0005170g0010 Nicotiana tabacum HOM05D004915 ORTHO05D006048 1.7e-36 157.1 107 67.3
FAN06G0706 Fragaria x ananassa HOM05D004915 ORTHO05D006048 6.1e-26 122.1 97 56.7
Ah.04g150570 Amaranthus hybridus HOM05D004915 ORTHO05D006048 7.0e-22 108.6 79 63.3
QL06p014899 Quercus lobata HOM05D004915 ORTHO05D006048 1.2e-21 107.8 64 71.9
Nitab4.5_0005170g0060 Nicotiana tabacum HOM05D004915 ORTHO05D006048 1.0e-17 94.7 82 56.1
ATR0642G001 Amborella trichopoda HOM05D004915 ORTHO05D006048 2.4e-14 83.6 49 77.6
DCAR_015961 Daucus carota HOM05D004915 ORTHO05D006048 7.8e-13 78.6 68 47.1
Pp3s30_306 Physcomitrium patens HOM05D004915 ORTHO05D043763 1.4e-09 67.8 169 29.0


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