Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.BX3238 Arachis hypogaea HOM05D007678 ORTHO05D009658 1.4e-100 369.8 202 100.0
arahy.Tifrunner.gnm1.ann1.NH3ZAS Arachis hypogaea HOM05D007678 ORTHO05D009658 1.2e-24 117.5 118 60.2
arahy.Tifrunner.gnm1.ann1.EB95VJ Arachis hypogaea HOM05D007678 ORTHO05D009658 5.3e-20 102.1 89 69.7
TPR.G4277 Trifolium pratense HOM05D007678 ORTHO05D009658 6.2e-13 78.6 87 59.8
Lalb_Chr17g0337231 Lupinus albus HOM05D007678 ORTHO05D009658 8.2e-13 78.2 72 62.5
Psat3g196520 Pisum sativum HOM05D007678 ORTHO05D009658 8.2e-13 78.2 88 55.7
Lj1g0010481 Lotus japonicus HOM05D007678 ORTHO05D009658 1.1e-12 77.8 72 62.5
Medtr7g009670 Medicago truncatula HOM05D007678 ORTHO05D009658 6.9e-12 75.1 93 55.9
Phvul.008G043200 Phaseolus vulgaris HOM05D007678 ORTHO05D009658 6.9e-12 75.1 72 59.7
Ca_04109_v3 Cicer arietinum L. HOM05D007678 ORTHO05D009658 3.4e-11 72.8 87 54.0
Ca_04118_v3 Cicer arietinum L. HOM05D007678 ORTHO05D009658 3.4e-11 72.8 87 54.0
Eucgr.G03196 Eucalyptus grandis HOM05D007678 ORTHO05D009658 2.2e-10 70.1 59 59.3
Glyma.09G240200 Glycine max HOM05D007678 ORTHO05D009658 2.9e-10 69.7 72 58.3
PGR031G1114 Punica granatum HOM05D007678 ORTHO05D009658 1.2e-08 64.3 59 59.3
MD02G1272300 Malus domestica HOM05D007678 ORTHO05D009658 3.5e-08 62.8 70 55.7
QL04p021923 Quercus lobata HOM05D007678 ORTHO05D009658 6.1e-08 62.0 78 50.0
Manes.04G155050 Manihot esculenta HOM05D007678 ORTHO05D009658 7.9e-08 61.6 78 50.0
Potri.001G033500 Populus trichocarpa HOM05D007678 ORTHO05D009658 1.0e-07 61.2 82 51.2
Atru.chr2.1713_Atru.chr2.1714 Acer truncatum HOM05D007678 ORTHO05D009658 1.3e-07 60.8 74 51.4
HanXRQChr12g0376111 Helianthus annuus HOM05D007678 ORTHO05D009658 1.8e-07 60.5 68 54.4
Hund13420 Selenicereus undatus HOM05D007678 ORTHO05D009658 2.3e-07 60.1 53 62.3
Prupe.2G048500 Prunus persica HOM05D007678 ORTHO05D009658 3.0e-07 59.7 68 54.4
Sed0019894 Sechium edule HOM05D000001 ORTHO05D000003 1.1e-06 57.8 87 44.8
EL10Ac2g02701 Beta vulgaris HOM05D007678 ORTHO05D009658 1.5e-06 57.4 60 58.3
TAR623G0324 Trochodendron aralioides HOM05D007678 ORTHO05D009658 1.5e-06 57.4 86 43.0
Sc10g0003150 Simmondsia chinensis HOM05D007678 ORTHO05D009658 2.5e-06 56.6 74 47.3
RcHm_v2.0_Chr1g0328821 Rosa chinensis HOM05D007678 ORTHO05D009658 3.3e-06 56.2 74 47.3
FvH4_7g04260 Fragaria vesca HOM05D007678 ORTHO05D009658 5.7e-06 55.5 70 50.0
FAN10G0661 Fragaria x ananassa HOM05D007678 ORTHO05D009658 5.7e-06 55.5 70 50.0
Cc06_g20600 Coffea canephora HOM05D007678 ORTHO05D009658 7.4e-06 55.1 80 45.0
MELO3C034052.2 Cucumis melo HOM05D007678 ORTHO05D009658 7.4e-06 55.1 87 42.5
Dinv31528 Davidia involucrata HOM05D007678 ORTHO05D009658 7.4e-06 55.1 84 42.9
TWI38G1059 Tripterygium wilfordii HOM05D007678 ORTHO05D009658 7.4e-06 55.1 69 49.3
Oeu044217.3 Olea europaea HOM05D007678 ORTHO05D009658 9.7e-06 54.7 89 42.7


User provided reference genes

Program Settings