Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.BUI0SE Arachis hypogaea HOM05D002745 ORTHO05D002945 2.6e-71 271.9 137 100.0
arahy.Tifrunner.gnm1.ann1.A85HWF Arachis hypogaea HOM05D002745 ORTHO05D002945 1.2e-28 130.2 70 92.9
arahy.Tifrunner.gnm1.ann1.4VP9UF Arachis hypogaea HOM05D002745 ORTHO05D002945 8.0e-28 127.5 69 92.8
Aqoxy5G00847 Aquilegia oxysepala HOM05D002745 ORTHO05D002945 1.7e-14 83.2 71 53.5
Potri.019G074800 Populus trichocarpa HOM05D002745 ORTHO05D002945 3.8e-14 82.0 73 57.5
Nn5g27270 Nelumbo nucifera HOM05D002745 ORTHO05D002945 5.0e-14 81.6 64 62.5
CiPaw.03G016400 Carya illinoinensis HOM05D002745 ORTHO05D002945 1.1e-13 80.5 46 80.4
Migut.C01366 Erythranthe guttata HOM05D002745 ORTHO05D002945 1.5e-13 80.1 53 71.7
Hma1.2p1_0004F.1_g003790 Hydrangea macrophylla HOM05D002745 ORTHO05D002945 4.2e-13 78.6 57 63.2
Hma1.2p1_0004F.1_g003800 Hydrangea macrophylla HOM05D002745 ORTHO05D002945 4.2e-13 78.6 57 63.2
Haze_13938 Corylus avellana HOM05D002745 ORTHO05D002945 5.5e-13 78.2 45 80.0
Sabra19G0085500 Salix brachista HOM05D002745 ORTHO05D002945 1.2e-12 77.0 73 53.4
Nitab4.5_0005550g0050 Nicotiana tabacum HOM05D002745 ORTHO05D002945 1.6e-12 76.6 46 76.1
Nitab4.5_0006500g0010 Nicotiana tabacum HOM05D002745 ORTHO05D002945 2.1e-12 76.3 48 72.9
Phvul.002G035800 Phaseolus vulgaris HOM05D002745 ORTHO05D002945 3.6e-12 75.5 47 74.5
Dinv02444 Davidia involucrata HOM05D002745 ORTHO05D002945 4.7e-12 75.1 49 69.4
VMungo1215G1904 Vigna mungo HOM05D002745 ORTHO05D002945 4.7e-12 75.1 90 52.2
VMungo1309G2502 Vigna mungo HOM05D002745 ORTHO05D002945 4.7e-12 75.1 71 53.5
Cfa008098 Carpinus fangiana HOM05D002745 ORTHO05D002945 6.1e-12 74.7 42 81.0
Glyma.11G014300 Glycine max HOM05D002745 ORTHO05D002945 6.1e-12 74.7 46 73.9
TAR628G0730 Trochodendron aralioides HOM05D002745 ORTHO05D002945 6.1e-12 74.7 79 51.9
Medtr7g018880 Medicago truncatula HOM05D002745 ORTHO05D002945 8.0e-12 74.3 46 76.1
TPR.G28573 Trifolium pratense HOM05D002745 ORTHO05D002945 8.0e-12 74.3 76 52.6
MSTRG.1588 Avicennia marina HOM05D002745 ORTHO05D002945 1.0e-11 73.9 79 50.6
EL10Ac1g01732 Beta vulgaris HOM05D002745 ORTHO05D002945 1.0e-11 73.9 87 43.7
TWI18G0548 Tripterygium wilfordii HOM05D002745 ORTHO05D002945 1.0e-11 73.9 48 68.8
Psat3g191440 Pisum sativum HOM05D002745 ORTHO05D002945 1.4e-11 73.6 46 76.1
CANSAT56G3529 Cannabis sativa HOM05D002745 ORTHO05D002945 2.3e-11 72.8 70 54.3
Lj9A699T54 Lonicera japonica HOM05D002745 ORTHO05D002945 2.3e-11 72.8 46 76.1
CAN.G1039.10 Capsicum annuum HOM05D002745 ORTHO05D002945 3.0e-11 72.4 44 77.3
Prupe.1G545800 Prunus persica HOM05D002745 ORTHO05D002945 3.0e-11 72.4 47 70.2
SalBow7G1915 Salvia bowleyana HOM05D000972 ORTHO05D007902 3.0e-11 72.4 53 64.2
Solyc11g042620.3 Solanum lycopersicum HOM05D002745 ORTHO05D002945 3.0e-11 72.4 48 68.8
Sopen11g018770 Solanum pennellii HOM05D002745 ORTHO05D002945 3.0e-11 72.4 48 68.8
Thecc.07G155300 Theobroma cacao HOM05D002745 ORTHO05D002945 4.0e-11 72.0 52 65.4
DCAR_014054 Daucus carota HOM05D002745 ORTHO05D002945 5.2e-11 71.6 48 66.7
Peaxi162Scf00078g00352 Petunia axillaris HOM05D002745 ORTHO05D002945 5.2e-11 71.6 61 54.1
Hund17567 Selenicereus undatus HOM05D002745 ORTHO05D002945 5.2e-11 71.6 53 60.4
Eucgr.F02973 Eucalyptus grandis HOM05D002745 ORTHO05D002945 6.8e-11 71.2 52 61.5
Lsat_1_v5_gn_4_133100 Lactuca sativa HOM05D002745 ORTHO05D002945 6.8e-11 71.2 49 63.3
Actinidia29392 Actinidia chinensis HOM05D002745 ORTHO05D002945 8.8e-11 70.9 64 54.7
COL.COLO4_09994 Corchorus olitorius HOM05D002745 ORTHO05D002945 1.2e-10 70.5 76 47.4
Manes.18G119000 Manihot esculenta HOM05D002745 ORTHO05D002945 1.2e-10 70.5 46 69.6
SGA_v2.0_scaffold118G32594 Striga asiatica HOM05D002745 ORTHO05D002945 1.2e-10 70.5 70 50.0
PSO017G3694 Papaver somniferum HOM05D002745 ORTHO05D002945 1.5e-10 70.1 84 44.0
LjContig00222g0027382 Lotus japonicus HOM05D002745 ORTHO05D002945 2.0e-10 69.7 46 69.6
MD08G1213700 Malus domestica HOM05D002745 ORTHO05D002945 2.0e-10 69.7 56 60.7
Rhsim08G0115600 Rhododendron simsii HOM05D002745 ORTHO05D002945 2.6e-10 69.3 50 68.0
GSVIVG01036391001 Vitis vinifera HOM05D002745 ORTHO05D002945 2.6e-10 69.3 46 67.4
Cc10_g08820 Coffea canephora HOM05D002745 ORTHO05D002945 3.4e-10 68.9 54 57.4
Lalb_Chr05g0211391 Lupinus albus HOM05D002745 ORTHO05D002945 3.4e-10 68.9 46 67.4
unitig_37.g13082 Utricularia gibba HOM05D002745 ORTHO05D002945 4.4e-10 68.6 100 41.0
Ah.11g043280 Amaranthus hybridus HOM05D002745 ORTHO05D002945 5.7e-10 68.2 81 43.2
Cpa.g.sc21.67 Carica papaya HOM05D002745 ORTHO05D002945 5.7e-10 68.2 43 69.8
Thhalv10019116m.g Eutrema salsugineum HOM05D002745 ORTHO05D002945 5.7e-10 68.2 62 54.8
RcHm_v2.0_Chr7g0231601 Rosa chinensis HOM05D002745 ORTHO05D002945 5.7e-10 68.2 45 68.9
FvH4_5g33211 Fragaria vesca HOM05D002745 ORTHO05D002945 7.5e-10 67.8 46 65.2
Gohir.A13G153132 Gossypium hirsutum HOM05D002745 ORTHO05D002945 7.5e-10 67.8 45 68.9
Oeu023204.1 Olea europaea HOM05D002745 ORTHO05D002945 7.5e-10 67.8 84 46.4
CDE05G0322 Ceratophyllum demersum HOM05D002745 ORTHO05D002945 9.8e-10 67.4 66 50.0
AUR62022409 Chenopodium quinoa HOM05D002745 ORTHO05D002945 9.8e-10 67.4 44 70.5
FAN18G3413 Fragaria x ananassa HOM05D000972 ORTHO05D007902 9.8e-10 67.4 46 65.2
QL09p003658 Quercus lobata HOM05D002745 ORTHO05D002945 9.8e-10 67.4 45 68.9
vmacro17840 Vaccinium macrocarpon HOM05D002745 ORTHO05D002945 9.8e-10 67.4 45 66.7
Duzib213G0784 Durio zibethinus HOM05D002745 ORTHO05D002945 1.3e-09 67.0 47 66.0
FAN08G1704 Fragaria x ananassa HOM05D002745 ORTHO05D002945 1.3e-09 67.0 46 63.0
Atru.chr13.2449 Acer truncatum HOM05D002745 ORTHO05D002945 1.7e-09 66.6 60 53.3
ClCG09G019570 Citrullus lanatus HOM05D002745 ORTHO05D002945 1.7e-09 66.6 51 62.7
ECA232G4303 Erigeron canadensis HOM05D000972 ORTHO05D007902 1.7e-09 66.6 58 56.9
HanXRQChr17g0559011 Helianthus annuus HOM05D002745 ORTHO05D002945 1.7e-09 66.6 59 55.9
Zm00001eb127280 Zea mays HOM05D002745 ORTHO05D002945 1.7e-09 66.6 59 52.5
Carub.0002s1834 Capsella rubella HOM05D002745 ORTHO05D002945 2.8e-09 65.9 62 53.2
PGR042G2485 Punica granatum HOM05D002745 ORTHO05D002945 2.8e-09 65.9 46 65.2
Sed0018292 Sechium edule HOM05D002745 ORTHO05D002945 2.8e-09 65.9 47 66.0
MBI06_g21934_MAGBIO Magnolia biondii HOM05D002745 ORTHO05D002945 3.7e-09 65.5 76 51.3
AUR62042167 Chenopodium quinoa HOM05D002745 ORTHO05D002945 4.8e-09 65.1 40 72.5
MELO3C021613.2 Cucumis melo HOM05D002745 ORTHO05D002945 4.8e-09 65.1 52 59.6
CsaV3_5G026810 Cucumis sativus L. HOM05D002745 ORTHO05D002945 4.8e-09 65.1 51 58.8
Duzib213G0118 Durio zibethinus HOM05D002745 ORTHO05D002945 4.8e-09 65.1 47 63.8
Os09g0266000 Oryza sativa ssp. japonica HOM05D002745 ORTHO05D002945 6.3e-09 64.7 64 51.6
Ciclev10022055m.g Citrus clementina HOM05D002745 ORTHO05D002945 8.3e-09 64.3 42 69.0
Sp5g26630 Schrenkiella parvula HOM05D002745 ORTHO05D002945 8.3e-09 64.3 62 51.6
THA.LOC104810399 Tarenaya hassleriana HOM05D002745 ORTHO05D002945 1.1e-08 63.9 79 44.3
Gohir.D13G157700 Gossypium hirsutum HOM05D002745 ORTHO05D002945 1.4e-08 63.5 44 65.9
Gorai.013G178400 Gossypium raimondii HOM05D002745 ORTHO05D002945 1.4e-08 63.5 44 65.9
Thecc.07G155700 Theobroma cacao HOM05D002745 ORTHO05D002945 1.4e-08 63.5 70 51.4
Aa31LG4G9110 Aethionema arabicum HOM05D002745 ORTHO05D002945 1.8e-08 63.2 58 51.7
HPP92_009206 Vanilla planifolia HOM05D002745 ORTHO05D002945 1.8e-08 63.2 61 47.5
CSS0030148 Camellia sinensis var. sinensis HOM05D002745 ORTHO05D002945 5.4e-08 61.6 40 65.0
AL2G31140 Arabidopsis lyrata HOM05D002745 ORTHO05D002945 7.0e-08 61.2 76 44.7
SMO200G0065 Selaginella moellendorffii HOM05D002745 ORTHO05D002945 9.1e-08 60.8 80 43.8
AT1G71480 Arabidopsis thaliana HOM05D002745 ORTHO05D002945 1.2e-07 60.5 76 43.4
CARHR291200 Cardamine hirsuta HOM05D002745 ORTHO05D002945 1.6e-07 60.1 61 47.5
SEGI_29799 Sequoiadendron giganteum HOM05D002745 ORTHO05D002945 2.7e-07 59.3 44 56.8
Potri.013G100600 Populus trichocarpa HOM05D002745 ORTHO05D002945 3.5e-07 58.9 75 40.0
A07p30690 Brassica napus HOM05D002745 ORTHO05D002945 2.9e-06 55.8 42 59.5
BraA07t30707Z Brassica rapa HOM05D002745 ORTHO05D002945 2.9e-06 55.8 42 59.5
ATR1089G026 Amborella trichopoda HOM05D002745 ORTHO05D002945 3.8e-06 55.5 66 45.5
ClCG11G010250 Citrullus lanatus HOM05D003193 ORTHO05D004924 5.0e-06 55.1 113 38.9
CsaV3_2G010070 Cucumis sativus L. HOM05D003193 ORTHO05D004924 5.0e-06 55.1 113 38.9


User provided reference genes

Program Settings