Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.BRCM5A Arachis hypogaea HOM05D006267 ORTHO05D007490 0.0e+00 1333.2 679 100.0
arahy.Tifrunner.gnm1.ann1.SWZD22 Arachis hypogaea HOM05D006267 ORTHO05D007490 0.0e+00 1322.8 679 99.0
Glyma.08G018700 Glycine max HOM05D006267 ORTHO05D007490 1.1e-231 807.0 697 63.7
Glyma.05G212200 Glycine max HOM05D006267 ORTHO05D007490 1.3e-227 793.5 680 63.7
VMungo0251G1048 Vigna mungo HOM05D006267 ORTHO05D007490 3.7e-219 765.4 681 62.0
Phvul.002G293500 Phaseolus vulgaris HOM05D006267 ORTHO05D007490 8.3e-219 764.2 698 61.2
Lj4g0011337 Lotus japonicus HOM05D006267 ORTHO05D007490 3.5e-217 758.8 699 61.5
TPR.G12935 Trifolium pratense HOM05D006267 ORTHO05D007490 1.1e-213 747.3 686 60.8
Medtr8g098995 Medicago truncatula HOM05D006267 ORTHO05D007490 2.1e-209 733.0 615 64.9
Lalb_Chr05g0224451 Lupinus albus HOM05D006267 ORTHO05D007490 1.3e-208 730.3 678 61.2
Ca_10954_v3 Cicer arietinum L. HOM05D006267 ORTHO05D007490 1.5e-207 726.9 681 61.8
Lalb_Chr09g0333071 Lupinus albus HOM05D006267 ORTHO05D007490 2.5e-207 726.1 680 61.0
Psat7g029320 Pisum sativum HOM05D006267 ORTHO05D007490 2.3e-200 703.0 621 64.3
VMungo1215G1298 Vigna mungo HOM05D006267 ORTHO05D007490 7.9e-153 545.0 611 52.4
Phvul.002G160500 Phaseolus vulgaris HOM05D006267 ORTHO05D007490 8.8e-152 541.6 603 53.1
Cfa012253 Carpinus fangiana HOM05D006267 ORTHO05D007490 1.0e-147 528.1 714 46.8
QL02p033236 Quercus lobata HOM05D006267 ORTHO05D007490 1.2e-137 494.6 683 45.2
Thecc.03G287200 Theobroma cacao HOM05D006267 ORTHO05D007490 1.6e-132 477.6 700 45.6
MD06G1092500 Malus domestica HOM05D006267 ORTHO05D007490 3.2e-130 469.9 697 44.2
COL.COLO4_08352 Corchorus olitorius HOM05D006267 ORTHO05D007490 1.2e-129 468.0 696 43.8
Duzib084G0031 Durio zibethinus HOM05D006267 ORTHO05D007490 2.3e-128 463.8 674 44.5
MD14G1113000 Malus domestica HOM05D006267 ORTHO05D007490 2.6e-127 460.3 700 42.9
Atru.chr9.2105 Acer truncatum HOM05D006267 ORTHO05D007490 8.3e-126 455.3 688 43.9
GSVIVG01019426001 Vitis vinifera HOM05D006267 ORTHO05D007490 9.1e-125 451.8 702 42.9
Dinv37589 Davidia involucrata HOM05D006267 ORTHO05D007490 2.3e-120 437.2 695 42.7
Prupe.5G107200 Prunus persica HOM05D006267 ORTHO05D007490 2.3e-120 437.2 574 47.2
Gohir.D11G022800 Gossypium hirsutum HOM05D006267 ORTHO05D007490 1.6e-116 424.5 594 45.3
Gorai.007G024600 Gossypium raimondii HOM05D006267 ORTHO05D007490 1.3e-115 421.4 594 45.3
RcHm_v2.0_Chr7g0196491 Rosa chinensis HOM05D006267 ORTHO05D007490 1.5e-114 417.9 672 41.5
Gohir.A11G023100 Gossypium hirsutum HOM05D006267 ORTHO05D007490 1.9e-114 417.5 594 45.1
CANSAT21G1484 Cannabis sativa HOM05D006267 ORTHO05D007490 3.3e-114 416.8 696 41.8
ClCG07G007820 Citrullus lanatus HOM05D006267 ORTHO05D007490 2.1e-113 414.1 701 40.9
Manes.01G056900 Manihot esculenta HOM05D006267 ORTHO05D007490 2.8e-113 413.7 690 40.7
Ciclev10019222m.g Citrus clementina HOM05D006267 ORTHO05D007490 6.8e-112 409.1 692 40.0
CiPaw.12G088700 Carya illinoinensis HOM05D006267 ORTHO05D007490 3.4e-111 406.8 596 43.0
Duzib205G1874 Durio zibethinus HOM05D006267 ORTHO05D007490 2.4e-109 400.6 696 39.4
Potri.001G098500 Populus trichocarpa HOM05D006267 ORTHO05D007490 3.2e-109 400.2 567 45.3
FAN18G3550 Fragaria x ananassa HOM05D006267 ORTHO05D007490 9.2e-109 398.7 587 44.3
FvH4_5g03290 Fragaria vesca HOM05D006267 ORTHO05D007490 3.5e-108 396.7 592 43.6
CsaV3_4G006140 Cucumis sativus L. HOM05D006267 ORTHO05D007490 2.9e-107 393.7 707 40.0
Manes.02G016400 Manihot esculenta HOM05D006267 ORTHO05D007490 3.9e-107 393.3 548 44.0
Dinv38895 Davidia involucrata HOM05D006267 ORTHO05D007490 7.3e-106 389.0 589 42.8
FAN04G2714 Fragaria x ananassa HOM05D006267 ORTHO05D007490 1.4e-104 384.8 642 41.3
FAN04G3088 Fragaria x ananassa HOM05D006267 ORTHO05D007490 1.8e-104 384.4 617 42.3
FAN08G1104 Fragaria x ananassa HOM05D006267 ORTHO05D007490 2.3e-104 384.0 616 42.2
CSS0029775 Camellia sinensis var. sinensis HOM05D006267 ORTHO05D007490 5.8e-103 379.4 712 38.3
Sed0011828 Sechium edule HOM05D006267 ORTHO05D007490 7.5e-103 379.0 613 40.5
Cpa.g.sc201.8 Carica papaya HOM05D006267 ORTHO05D007490 2.9e-102 377.1 677 39.0
Potri.003G133100 Populus trichocarpa HOM05D006267 ORTHO05D007490 5.4e-101 372.9 582 42.8
FAN13G1859 Fragaria x ananassa HOM05D006267 ORTHO05D007490 3.5e-100 370.2 674 39.9
MELO3C016335.2 Cucumis melo HOM05D006267 ORTHO05D007490 1.6e-97 361.3 706 39.4
TAR629G1352 Trochodendron aralioides HOM05D006267 ORTHO05D007490 2.1e-97 360.9 701 38.4
Sabra03G0095400 Salix brachista HOM05D006267 ORTHO05D007490 8.1e-97 359.0 576 41.7
FAN13G1356 Fragaria x ananassa HOM05D006267 ORTHO05D007490 1.8e-96 357.8 674 39.3
Haze_08744 Corylus avellana HOM05D006267 ORTHO05D007490 7.5e-95 352.4 710 36.9
Actinidia33723 Actinidia chinensis HOM05D006267 ORTHO05D007490 9.8e-95 352.1 589 40.2
Sabra01G0073800 Salix brachista HOM05D006267 ORTHO05D007490 1.4e-93 348.2 587 40.9
Hma1.2p1_0216F.1_g091140 Hydrangea macrophylla HOM05D006267 ORTHO05D007490 3.0e-91 340.5 572 40.9
Actinidia27358 Actinidia chinensis HOM05D006267 ORTHO05D007490 7.3e-90 335.9 594 38.9
AUR62010761 Chenopodium quinoa HOM05D006267 ORTHO05D007490 7.3e-90 335.9 709 37.4
Lj2A177G41 Lonicera japonica HOM05D006267 ORTHO05D007490 9.5e-90 335.5 720 37.4
Nn1g01698 Nelumbo nucifera HOM05D006267 ORTHO05D007490 1.2e-89 335.1 727 38.1
EL10Ac5g12844 Beta vulgaris HOM05D006267 ORTHO05D007490 1.6e-89 334.7 700 37.3
TAR374G1011 Trochodendron aralioides HOM05D006267 ORTHO05D007490 1.1e-88 332.0 789 35.6
Duzib068G0865 Durio zibethinus HOM05D006267 ORTHO05D007490 3.1e-88 330.5 692 38.2
Eucgr.E00783 Eucalyptus grandis HOM05D006267 ORTHO05D007490 1.5e-87 328.2 621 38.6
AUR62019762 Chenopodium quinoa HOM05D006267 ORTHO05D007490 2.5e-82 310.8 660 37.3
Sed0002932 Sechium edule HOM05D006267 ORTHO05D007490 1.6e-81 308.1 524 40.1
TAR375G0718 Trochodendron aralioides HOM05D006267 ORTHO05D007490 2.1e-81 307.8 695 36.0
Cc08_g15330 Coffea canephora HOM05D006267 ORTHO05D007490 1.2e-79 302.0 534 37.5
PGR042G1146 Punica granatum HOM05D006267 ORTHO05D007490 5.8e-79 299.7 709 35.3
Sc01g0009910 Simmondsia chinensis HOM05D006267 ORTHO05D007490 3.9e-75 287.0 691 34.4
TWI60G1512 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 2.2e-70 271.2 444 41.0
Hund14261 Selenicereus undatus HOM05D006267 ORTHO05D007490 4.9e-70 270.0 614 35.0
THA.LOC104817764 Tarenaya hassleriana HOM05D006267 ORTHO05D007490 3.5e-68 263.8 635 35.1
Hund11430 Selenicereus undatus HOM05D006267 ORTHO05D007490 1.5e-66 258.5 768 32.2
Carub.0002s0075 Capsella rubella HOM05D006267 ORTHO05D007490 5.6e-66 256.5 655 32.8
TWI81G0535 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 9.6e-66 255.8 440 37.7
CARHR046900 Cardamine hirsuta HOM05D006267 ORTHO05D007490 1.3e-65 255.4 580 34.3
Nitab4.5_0002381g0070 Nicotiana tabacum HOM05D006267 ORTHO05D007490 2.1e-65 254.6 569 35.7
TWI15G0222 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 6.2e-65 253.1 446 39.9
vmacro13979 Vaccinium macrocarpon HOM05D006267 ORTHO05D007490 1.8e-64 251.5 625 32.5
DCAR_005575 Daucus carota HOM05D006267 ORTHO05D007490 4.0e-64 250.4 572 33.6
Thhalv10023327m.g Eutrema salsugineum HOM05D006267 ORTHO05D007490 2.9e-62 244.2 573 34.2
Rhsim07G0086900 Rhododendron simsii HOM05D006267 ORTHO05D007490 4.9e-62 243.4 554 35.2
Aqoxy7G00177 Aquilegia oxysepala HOM05D006267 ORTHO05D007490 8.4e-62 242.7 726 33.1
AL2G11010 Arabidopsis lyrata HOM05D006267 ORTHO05D007490 8.4e-62 242.7 574 34.3
Peaxi162Scf00117g01519 Petunia axillaris HOM05D006267 ORTHO05D007490 3.5e-60 237.3 571 33.5
MSTRG.1836 Avicennia marina HOM05D006267 ORTHO05D007490 2.3e-59 234.6 678 33.5
Lsat_1_v5_gn_3_11600 Lactuca sativa HOM05D006267 ORTHO05D007490 2.3e-59 234.6 704 32.4
Nitab4.5_0003366g0020 Nicotiana tabacum HOM05D006267 ORTHO05D007490 2.3e-59 234.6 570 33.7
HanXRQChr17g0533871 Helianthus annuus HOM05D006267 ORTHO05D007490 5.1e-59 233.4 714 32.1
Sp2g00660 Schrenkiella parvula HOM05D006267 ORTHO05D007490 6.7e-59 233.0 616 31.8
BcaB07g31428 Brassica carinata HOM05D006267 ORTHO05D007490 1.3e-57 228.8 650 31.7
ECA246G3109 Erigeron canadensis HOM05D006267 ORTHO05D007490 2.8e-57 227.6 579 34.5
C09p18210 Brassica napus HOM05D006267 ORTHO05D007490 5.3e-56 223.4 626 31.6
AT1G64050 Arabidopsis thaliana HOM05D006267 ORTHO05D007490 9.0e-56 222.6 587 33.6
BolC9t54717H Brassica oleracea HOM05D006267 ORTHO05D007490 5.8e-55 219.9 626 31.5
BcaC04g22526 Brassica carinata HOM05D006267 ORTHO05D007490 7.6e-55 219.5 626 31.6
Migut.E01211 Erythranthe guttata HOM05D006267 ORTHO05D007490 7.6e-55 219.5 362 40.9
Sopen12g028680 Solanum pennellii HOM05D006267 ORTHO05D007490 1.3e-54 218.8 674 32.0
Aa31LG2G1120 Aethionema arabicum HOM05D006267 ORTHO05D007490 8.4e-54 216.1 496 35.3
BraA09t37153Z Brassica rapa HOM05D006267 ORTHO05D007490 1.4e-53 215.3 630 32.1
A09p15090 Brassica napus HOM05D006267 ORTHO05D007490 2.5e-53 214.5 637 30.9
Solyc12g056170.2 Solanum lycopersicum HOM05D006267 ORTHO05D007490 2.5e-53 214.5 673 31.8
MSTRG.13864 Avicennia marina HOM05D006267 ORTHO05D007490 1.0e-51 209.1 528 34.3
PGSC0003DMG400004984 Solanum tuberosum HOM05D006267 ORTHO05D007490 4.3e-50 203.8 726 30.9
SGA_v2.0_scaffold111G31467 Striga asiatica HOM05D006267 ORTHO05D007490 2.8e-49 201.1 671 30.1
MBI04_g06288_MAGBIO Magnolia biondii HOM05D006267 ORTHO05D007490 1.1e-48 199.1 381 37.8
PSO170G4156 Papaver somniferum HOM05D006267 ORTHO05D007490 5.1e-35 153.7 300 36.7
PSO063G3925 Papaver somniferum HOM05D006267 ORTHO05D007490 1.1e-34 152.5 297 36.7
CiPaw.11G129100 Carya illinoinensis HOM05D006267 ORTHO05D007490 2.4e-32 144.8 220 40.5
SHI07081 Sapria himalayana HOM05D006267 ORTHO05D007490 2.0e-31 141.7 482 30.5
HPP92_003940 Vanilla planifolia HOM05D006267 ORTHO05D007490 1.1e-24 119.4 780 24.5
unitig_52.g17233 Utricularia gibba HOM05D006267 ORTHO05D007490 3.1e-24 117.9 372 28.0
Psat0s1200g0040 Pisum sativum HOM05D005109 ORTHO05D006084 3.1e-16 91.3 123 49.6
Zm00001eb237760 Zea mays HOM05D006267 ORTHO05D007490 3.1e-16 91.3 556 23.6
ATR0188G022 Amborella trichopoda HOM05D006267 ORTHO05D007490 4.5e-15 87.4 290 28.6
HanXRQChr06g0166231 Helianthus annuus HOM05D006267 ORTHO05D007490 5.9e-15 87.0 173 37.0
CiPaw.11G129200 Carya illinoinensis HOM05D006267 ORTHO05D007490 4.8e-09 67.4 75 52.0
Psat6g214080 Pisum sativum HOM05D001701 ORTHO05D007490 1.2e-07 62.8 70 52.9
HPP92_023938 Vanilla planifolia HOM05D006267 ORTHO05D007490 8.5e-06 56.6 316 28.2


User provided reference genes

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