Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.BLY3DW Arachis hypogaea HOM05D005193 ORTHO05D006316 1.7e-70 269.2 141 100.0
arahy.Tifrunner.gnm1.ann1.J5TE7C Arachis hypogaea HOM05D005193 ORTHO05D006316 9.9e-50 200.3 116 93.1
arahy.Tifrunner.gnm1.ann1.K04HM7 Arachis hypogaea HOM05D005193 ORTHO05D006316 6.4e-49 197.6 116 92.2
VMungo0647G2043 Vigna mungo HOM05D005193 ORTHO05D006316 5.9e-34 147.9 110 71.8
Glyma.14G021300 Glycine max HOM05D005193 ORTHO05D006316 1.7e-33 146.4 110 70.0
Phvul.008G270200 Phaseolus vulgaris HOM05D005193 ORTHO05D006316 8.5e-33 144.1 102 72.5
Ca_11685_v3 Cicer arietinum L. HOM05D005193 ORTHO05D006316 5.5e-32 141.4 119 62.2
LjContig00272g0004657 Lotus japonicus HOM05D005193 ORTHO05D006316 7.2e-32 141.0 99 70.7
Medtr1g056460 Medicago truncatula HOM05D005193 ORTHO05D006316 1.6e-31 139.8 120 65.8
Psat6g078440 Pisum sativum HOM05D005193 ORTHO05D006316 2.1e-31 139.4 119 64.7
TPR.G2822 Trifolium pratense HOM05D005193 ORTHO05D006316 1.3e-30 136.7 119 62.2
Lalb_Chr17g0348631 Lupinus albus HOM05D005193 ORTHO05D006316 5.1e-30 134.8 113 64.6
QL08p009116 Quercus lobata HOM05D005193 ORTHO05D006316 4.1e-27 125.2 100 64.0
CiPaw.11G192300 Carya illinoinensis HOM05D005193 ORTHO05D006316 4.5e-26 121.7 110 59.1
Gohir.D01G069100 Gossypium hirsutum HOM05D005193 ORTHO05D006316 7.7e-26 120.9 95 63.2
Gorai.002G091400 Gossypium raimondii HOM05D005193 ORTHO05D006316 1.0e-25 120.6 109 59.6
Haze_09711 Corylus avellana HOM05D005193 ORTHO05D006316 2.9e-25 119.0 103 60.2
Ciclev10007388m.g Citrus clementina HOM05D005193 ORTHO05D006316 8.5e-25 117.5 105 58.1
Gohir.A01G082500 Gossypium hirsutum HOM05D005193 ORTHO05D006316 1.1e-24 117.1 95 62.1
MD03G1197400 Malus domestica HOM05D005193 ORTHO05D006316 1.4e-24 116.7 90 62.2
Thecc.07G032100 Theobroma cacao HOM05D005193 ORTHO05D006316 1.9e-24 116.3 95 62.1
GSVIVG01037690001 Vitis vinifera HOM05D005193 ORTHO05D006316 1.9e-24 116.3 96 60.4
Potri.001G356700 Populus trichocarpa HOM05D005193 ORTHO05D006316 7.2e-24 114.4 105 54.3
Manes.15G068700 Manihot esculenta HOM05D005193 ORTHO05D006316 1.2e-23 113.6 107 58.9
TWI38G1184 Tripterygium wilfordii HOM05D005193 ORTHO05D006316 2.1e-23 112.8 110 51.8
Duzib268G1225 Durio zibethinus HOM05D005193 ORTHO05D006316 2.7e-23 112.5 110 56.4
CANSAT11G2467 Cannabis sativa HOM05D005193 ORTHO05D006316 4.6e-23 111.7 111 51.4
Eucgr.F03483 Eucalyptus grandis HOM05D005193 ORTHO05D006316 6.1e-23 111.3 95 57.9
MBI07_g09089_MAGBIO Magnolia biondii HOM05D005193 ORTHO05D006316 1.0e-22 110.5 106 53.8
FAN25G0346 Fragaria x ananassa HOM05D005193 ORTHO05D006316 1.8e-22 109.8 90 60.0
FAN25G2894 Fragaria x ananassa HOM05D005193 ORTHO05D006316 1.8e-22 109.8 90 60.0
HanXRQChr11g0335911 Helianthus annuus HOM05D005193 ORTHO05D006316 1.8e-22 109.8 97 56.7
Lsat_1_v5_gn_7_111080 Lactuca sativa HOM05D005193 ORTHO05D006316 1.8e-22 109.8 97 56.7
AT1G50730 Arabidopsis thaliana HOM05D005193 ORTHO05D006316 3.9e-22 108.6 111 51.4
Carub.0001s3976 Capsella rubella HOM05D005193 ORTHO05D006316 3.9e-22 108.6 89 60.7
Atru.chr2.3490 Acer truncatum HOM05D005193 ORTHO05D006316 5.1e-22 108.2 129 51.9
PGR031G1204 Punica granatum HOM05D005193 ORTHO05D006316 5.1e-22 108.2 99 53.5
FAN11G0281 Fragaria x ananassa HOM05D005193 ORTHO05D006316 6.7e-22 107.8 90 57.8
BcaC08g43253 Brassica carinata HOM05D005193 ORTHO05D006316 2.6e-21 105.9 117 48.7
FAN21G2135 Fragaria x ananassa HOM05D005193 ORTHO05D006316 2.6e-21 105.9 90 56.7
RcHm_v2.0_Chr5g0040821 Rosa chinensis HOM05D005193 ORTHO05D006316 2.6e-21 105.9 88 59.1
COL.COLO4_09693 Corchorus olitorius HOM05D005193 ORTHO05D006316 3.3e-21 105.5 139 45.3
A06p02890 Brassica napus HOM05D005193 ORTHO05D006316 4.4e-21 105.1 117 47.9
Nn1g03454 Nelumbo nucifera HOM05D005193 ORTHO05D006316 4.4e-21 105.1 107 51.4
Sp1g37570 Schrenkiella parvula HOM05D005193 ORTHO05D006316 7.4e-21 104.4 101 54.5
C06p05990 Brassica napus HOM05D005193 ORTHO05D006316 1.3e-20 103.6 117 47.9
BolC6t35712H Brassica oleracea HOM05D005193 ORTHO05D006316 1.3e-20 103.6 117 47.9
RhsimUnG0248800 Rhododendron simsii HOM05D005193 ORTHO05D006316 1.7e-20 103.2 92 59.8
ClCG09G010950 Citrullus lanatus HOM05D005193 ORTHO05D006316 2.2e-20 102.8 95 52.6
Thhalv10011218m.g Eutrema salsugineum HOM05D005193 ORTHO05D006316 2.2e-20 102.8 101 52.5
Sabra16G0234700 Salix brachista HOM05D005193 ORTHO05D006316 2.8e-20 102.4 118 45.8
ECA236G2682 Erigeron canadensis HOM05D005193 ORTHO05D006316 8.2e-20 100.9 99 50.5
Actinidia10743 Actinidia chinensis HOM05D005193 ORTHO05D006316 1.1e-19 100.5 95 55.8
CsaV3_7G021980 Cucumis sativus L. HOM05D005193 ORTHO05D006316 1.8e-19 99.8 95 52.6
PSO832G1529 Papaver somniferum HOM05D005193 ORTHO05D006316 3.1e-19 99.0 108 46.3
MELO3C013149.2 Cucumis melo HOM05D005193 ORTHO05D006316 4.1e-19 98.6 95 51.6
BraA06t23495Z Brassica rapa HOM05D005193 ORTHO05D006316 5.3e-19 98.2 142 42.3
PSO210G7537 Papaver somniferum HOM05D005193 ORTHO05D006316 6.9e-19 97.8 109 45.0
BcaB07g33512 Brassica carinata HOM05D005193 ORTHO05D006316 1.2e-18 97.1 140 42.1
Hma1.2p1_0036F.1_g023390 Hydrangea macrophylla HOM05D005193 ORTHO05D006316 1.5e-18 96.7 116 46.6
THA.LOC104816145 Tarenaya hassleriana HOM05D005193 ORTHO05D006316 2.6e-18 95.9 93 50.5
Nitab4.5_0000168g0230 Nicotiana tabacum HOM05D005193 ORTHO05D006316 7.7e-18 94.4 96 46.9
Aqoxy1G03394 Aquilegia oxysepala HOM05D005193 ORTHO05D006316 1.7e-17 93.2 99 45.5
Sed0015549 Sechium edule HOM05D005193 ORTHO05D006316 1.7e-17 93.2 91 50.5
Aqoxy4G01697 Aquilegia oxysepala HOM05D005193 ORTHO05D006316 5.0e-17 91.7 99 44.4
Peaxi162Scf00660g00119 Petunia axillaris HOM05D005193 ORTHO05D006316 6.5e-17 91.3 93 48.4
Nitab4.5_0003450g0030 Nicotiana tabacum HOM05D005193 ORTHO05D006316 8.5e-17 90.9 96 44.8
Aqoxy4G00029 Aquilegia oxysepala HOM05D002071 ORTHO05D002109 1.1e-16 90.5 96 44.8
Ah.06g182590 Amaranthus hybridus HOM05D005193 ORTHO05D006316 1.9e-16 89.7 98 45.9
AUR62015820 Chenopodium quinoa HOM05D005193 ORTHO05D006316 5.5e-16 88.2 89 43.8
Solyc12g005090.3 Solanum lycopersicum HOM05D005193 ORTHO05D006316 7.2e-16 87.8 96 47.9
Sopen12g001090 Solanum pennellii HOM05D005193 ORTHO05D006316 9.4e-16 87.4 96 47.9
MSTRG.6941 Avicennia marina HOM05D005193 ORTHO05D006316 2.1e-15 86.3 93 47.3
Oeu041837.1 Olea europaea HOM05D005193 ORTHO05D006316 2.1e-15 86.3 90 47.8
FAN16G1885 Fragaria x ananassa HOM05D005193 ORTHO05D006316 4.7e-15 85.1 77 58.4
SalBow8G0199 Salvia bowleyana HOM05D005193 ORTHO05D006316 4.7e-15 85.1 86 51.2
TAR627G0707 Trochodendron aralioides HOM05D005193 ORTHO05D006316 3.9e-14 82.0 60 65.0
CSS0028155 Camellia sinensis var. sinensis HOM05D005193 ORTHO05D006316 2.0e-13 79.7 58 63.8
CSS0039097 Camellia sinensis var. sinensis HOM05D005193 ORTHO05D006316 2.6e-13 79.3 55 67.3
HPP92_008858 Vanilla planifolia HOM05D005193 ORTHO05D006316 5.7e-13 78.2 94 46.8
Dinv40781 Davidia involucrata HOM05D005193 ORTHO05D006316 9.7e-13 77.4 64 57.8
Aa31LG10G3620 Aethionema arabicum HOM05D005193 ORTHO05D006316 1.7e-12 76.6 94 46.8
ATR0585G071 Amborella trichopoda HOM05D005193 ORTHO05D006316 3.7e-12 75.5 129 34.9
Pp3c16_8580 Physcomitrium patens HOM05D005193 ORTHO05D006316 4.8e-12 75.1 99 34.3
Cc05_g14020 Coffea canephora HOM05D005193 ORTHO05D006316 6.3e-12 74.7 93 37.6
Migut.M01736 Erythranthe guttata HOM05D005193 ORTHO05D006316 2.4e-11 72.8 80 48.8
CDE02G0254 Ceratophyllum demersum HOM05D005193 ORTHO05D006316 1.2e-10 70.5 109 34.9
SEGI_26698 Sequoiadendron giganteum HOM05D005193 ORTHO05D006316 1.7e-09 66.6 91 33.0
Mapoly0038s0063 Marchantia polymorpha HOM05D005193 ORTHO05D006316 2.9e-09 65.9 96 34.4
Hund02002 Selenicereus undatus HOM05D005193 ORTHO05D006316 6.5e-09 64.7 88 39.8
AUR62020399 Chenopodium quinoa HOM05D005193 ORTHO05D006316 1.5e-08 63.5 60 48.3
Cpa.g.sc12.275 Carica papaya HOM05D005193 ORTHO05D006316 2.3e-06 56.2 40 62.5
Prupe.4G218100 Prunus persica HOM05D005193 ORTHO05D006316 6.7e-06 54.7 36 69.4


User provided reference genes

Program Settings