Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.BL3LB4 Arachis hypogaea HOM05D007180 ORTHO05D009028 1.8e-218 762.3 378 100.0
arahy.Tifrunner.gnm1.ann1.Z8Y5NA Arachis hypogaea HOM05D007180 ORTHO05D009028 4.7e-163 578.2 379 81.0
Glyma.08G202600 Glycine max HOM05D007180 ORTHO05D009028 2.9e-160 568.9 370 78.6
Glyma.07G017400 Glycine max HOM05D007180 ORTHO05D009028 1.0e-157 560.5 370 77.0
TPR.G35011 Trifolium pratense HOM05D007180 ORTHO05D009028 1.2e-153 547.0 369 76.2
Medtr8g013830 Medicago truncatula HOM05D007180 ORTHO05D009028 1.5e-153 546.6 369 75.9
Psat4g197600 Pisum sativum HOM05D007180 ORTHO05D009028 1.1e-151 540.4 369 75.1
Lalb_Chr04g0262871 Lupinus albus HOM05D007180 ORTHO05D009028 2.7e-150 535.8 357 76.5
Ca_11523_v3 Cicer arietinum L. HOM05D007180 ORTHO05D009028 1.7e-149 533.1 370 73.0
Lj3g0006974 Lotus japonicus HOM05D007180 ORTHO05D009028 2.1e-147 526.2 360 75.0
Phvul.010G146700 Phaseolus vulgaris HOM05D007180 ORTHO05D009028 2.3e-146 522.7 361 73.4
VMungo0331G0139 Vigna mungo HOM05D007180 ORTHO05D009028 9.2e-143 510.8 349 73.9
Ciclev10026017m.g Citrus clementina HOM05D007180 ORTHO05D009028 1.8e-138 496.5 338 74.0
Atru.chr1.3471 Acer truncatum HOM05D007180 ORTHO05D009028 2.9e-136 489.2 334 73.7
Prupe.3G062900 Prunus persica HOM05D007180 ORTHO05D009028 1.1e-135 487.3 340 72.1
RcHm_v2.0_Chr2g0139631 Rosa chinensis HOM05D007180 ORTHO05D009028 4.6e-134 481.9 333 72.7
CiPaw.02G147300 Carya illinoinensis HOM05D007180 ORTHO05D009028 1.0e-133 480.7 361 67.9
FvH4_6g32020 Fragaria vesca HOM05D007180 ORTHO05D009028 2.3e-133 479.6 340 71.2
FAN14G2528 Fragaria x ananassa HOM05D007180 ORTHO05D009028 2.3e-133 479.6 340 71.2
MD09G1206800 Malus domestica HOM05D007180 ORTHO05D009028 1.5e-132 476.9 340 71.2
FAN02G1418 Fragaria x ananassa HOM05D007180 ORTHO05D009028 2.1e-131 473.0 340 70.9
MD17G1187500 Malus domestica HOM05D007180 ORTHO05D009028 2.1e-131 473.0 342 70.2
GSVIVG01017035001 Vitis vinifera HOM05D007180 ORTHO05D009028 2.1e-131 473.0 340 70.6
QL05p020883 Quercus lobata HOM05D007180 ORTHO05D009028 2.8e-131 472.6 333 70.9
Duzib235G1436 Durio zibethinus HOM05D007180 ORTHO05D009028 4.7e-131 471.9 340 70.3
Gorai.003G063600 Gossypium raimondii HOM05D007180 ORTHO05D009028 6.2e-131 471.5 340 70.0
TAR383G0610 Trochodendron aralioides HOM05D007180 ORTHO05D009028 8.1e-131 471.1 338 70.1
Gohir.A02G119000 Gossypium hirsutum HOM05D007180 ORTHO05D009028 1.1e-130 470.7 340 70.0
Hma1.2p1_1689F.1_g297640 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 2.4e-130 469.5 336 69.3
Gohir.D03G059800 Gossypium hirsutum HOM05D007180 ORTHO05D009028 2.6e-129 466.1 340 69.4
Rhsim12G0201900 Rhododendron simsii HOM05D007180 ORTHO05D009028 2.6e-129 466.1 339 69.3
Cfa002118 Carpinus fangiana HOM05D007180 ORTHO05D009028 3.4e-129 465.7 337 69.1
PGR102G1587 Punica granatum HOM05D007180 ORTHO05D009028 3.4e-129 465.7 334 70.1
Thecc.06G096400 Theobroma cacao HOM05D007180 ORTHO05D009028 2.9e-128 462.6 340 68.8
Haze_16331 Corylus avellana HOM05D007180 ORTHO05D009028 2.1e-126 456.4 354 65.8
CANSAT56G0293 Cannabis sativa HOM05D007180 ORTHO05D009028 2.7e-126 456.1 339 68.7
Carub.0001s4110 Capsella rubella HOM05D007180 ORTHO05D009028 4.6e-126 455.3 336 68.8
Sp1g38710 Schrenkiella parvula HOM05D007180 ORTHO05D009028 4.6e-126 455.3 330 69.4
Aqoxy7G03907 Aquilegia oxysepala HOM05D007180 ORTHO05D009028 7.8e-126 454.5 341 66.0
BolC6t35829H Brassica oleracea HOM05D007180 ORTHO05D009028 1.0e-125 454.1 336 69.0
A06p02010 Brassica napus HOM05D007180 ORTHO05D009028 1.3e-125 453.8 336 69.0
BraA06t23417Z Brassica rapa HOM05D007180 ORTHO05D009028 1.3e-125 453.8 336 69.0
Thhalv10011664m.g Eutrema salsugineum HOM05D007180 ORTHO05D009028 1.3e-125 453.8 336 69.0
Eucgr.F03061 Eucalyptus grandis HOM05D007180 ORTHO05D009028 3.0e-125 452.6 334 68.0
Nn3g18173 Nelumbo nucifera HOM05D007180 ORTHO05D009028 5.1e-125 451.8 345 65.2
AT1G52155 Arabidopsis thaliana HOM05D007180 ORTHO05D009028 8.7e-125 451.1 336 68.2
THA.LOC104817969 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 1.1e-124 450.7 333 68.2
AL1G60250 Arabidopsis lyrata HOM05D007180 ORTHO05D009028 1.5e-124 450.3 336 68.2
THA.LOC104810533 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 4.3e-124 448.7 332 68.4
CARHR042290 Cardamine hirsuta HOM05D007180 ORTHO05D009028 1.3e-123 447.2 329 68.4
Aa31LG10G2730 Aethionema arabicum HOM05D007180 ORTHO05D009028 1.8e-122 443.4 333 67.0
C06p07400 Brassica napus HOM05D007180 ORTHO05D009028 6.9e-122 441.4 362 63.8
Sed0016027 Sechium edule HOM05D007180 ORTHO05D009028 1.3e-120 437.2 348 63.8
Potri.001G187300 Populus trichocarpa HOM05D007180 ORTHO05D009028 2.9e-120 436.0 340 66.8
Actinidia09001 Actinidia chinensis HOM05D007180 ORTHO05D009028 3.8e-120 435.6 337 65.3
PSO210G4764 Papaver somniferum HOM05D007180 ORTHO05D009028 4.9e-120 435.3 341 62.8
PSO210G1533 Papaver somniferum HOM05D007180 ORTHO05D009028 8.4e-120 434.5 336 62.8
CsaV3_7G033560 Cucumis sativus L. HOM05D007180 ORTHO05D009028 1.4e-119 433.7 350 62.0
Actinidia39147 Actinidia chinensis HOM05D007180 ORTHO05D009028 3.2e-119 432.6 333 64.6
Cc04_g02770 Coffea canephora HOM05D007180 ORTHO05D009028 1.6e-118 430.3 331 63.4
ClCG09G001780 Citrullus lanatus HOM05D007180 ORTHO05D009028 3.5e-118 429.1 360 61.4
TWI75G1824 Tripterygium wilfordii HOM05D007180 ORTHO05D009028 6.0e-118 428.3 344 64.0
TAR626G1393 Trochodendron aralioides HOM05D007180 ORTHO05D009028 2.5e-116 422.9 339 62.8
Oeu060509.1 Olea europaea HOM05D007180 ORTHO05D009028 2.8e-115 419.5 335 63.9
MELO3C024267.2 Cucumis melo HOM05D007180 ORTHO05D009028 3.1e-114 416.0 321 64.8
AUR62031877 Chenopodium quinoa HOM05D007180 ORTHO05D009028 1.2e-113 414.1 330 62.4
Sc10g0007260 Simmondsia chinensis HOM05D007180 ORTHO05D009028 2.2e-112 409.8 316 64.2
Solyc03g120830.3 Solanum lycopersicum HOM05D007180 ORTHO05D009028 2.2e-112 409.8 334 59.9
Sopen03g039650 Solanum pennellii HOM05D007180 ORTHO05D009028 2.9e-112 409.5 334 59.6
Lj5A56T50 Lonicera japonica HOM05D007180 ORTHO05D009028 6.4e-112 408.3 275 74.2
Nitab4.5_0007758g0080 Nicotiana tabacum HOM05D007180 ORTHO05D009028 1.1e-111 407.5 347 59.7
AUR62022171 Chenopodium quinoa HOM05D007180 ORTHO05D009028 1.9e-111 406.8 358 58.1
Nitab4.5_0001315g0310 Nicotiana tabacum HOM05D007180 ORTHO05D009028 2.4e-111 406.4 344 59.9
Dinv30459 Davidia involucrata HOM05D007180 ORTHO05D009028 1.6e-110 403.7 296 68.6
EL10Ac9g22108 Beta vulgaris HOM05D007180 ORTHO05D009028 2.1e-110 403.3 330 62.4
PGSC0003DMG401002538 Solanum tuberosum HOM05D007180 ORTHO05D009028 2.1e-110 403.3 334 59.0
Migut.I00923 Erythranthe guttata HOM05D007180 ORTHO05D009028 7.9e-110 401.4 338 58.0
SalBow2G0157 Salvia bowleyana HOM05D007180 ORTHO05D009028 4.3e-108 395.6 338 57.4
CAN.G438.9 Capsicum annuum HOM05D007180 ORTHO05D009028 9.6e-108 394.4 334 58.1
HanXRQChr09g0275941 Helianthus annuus HOM05D007180 ORTHO05D009028 1.4e-106 390.6 338 57.4
Peaxi162Scf00038g00837 Petunia axillaris HOM05D007180 ORTHO05D009028 1.4e-106 390.6 341 58.4
BcaC08g43372 Brassica carinata HOM05D007180 ORTHO05D009028 1.8e-106 390.2 304 66.4
Lsat_1_v5_gn_4_100560 Lactuca sativa HOM05D007180 ORTHO05D009028 6.9e-106 388.3 338 56.8
Hma1.2p1_1689F.1_g297650 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 1.9e-103 380.2 235 80.0
Ah.01g021850 Amaranthus hybridus HOM05D007180 ORTHO05D009028 2.1e-102 376.7 253 73.1
Manes.11G035900 Manihot esculenta HOM05D007180 ORTHO05D009028 2.1e-102 376.7 338 58.0
CSS0022642 Camellia sinensis var. sinensis HOM05D007180 ORTHO05D009028 1.8e-101 373.6 238 75.2
Os11g0466300 Oryza sativa ssp. japonica HOM05D007180 ORTHO05D009028 9.0e-98 361.3 336 52.7
Zm00001eb156840 Zea mays HOM05D007180 ORTHO05D009028 1.0e-96 357.8 310 56.5
vmacro16982 Vaccinium macrocarpon HOM05D007180 ORTHO05D009028 6.1e-94 348.6 336 54.2
Hund06649 Selenicereus undatus HOM05D007180 ORTHO05D009028 1.8e-93 347.1 342 55.3
ATR0705G160 Amborella trichopoda HOM05D007180 ORTHO05D009028 1.3e-83 314.3 259 59.5
AagrBONN_evm.TU.Sc2ySwM_344.297 Anthoceros agrestis HOM05D007180 ORTHO05D009028 8.2e-83 311.6 337 47.2
Mapoly0061s0142 Marchantia polymorpha HOM05D007180 ORTHO05D009028 2.4e-82 310.1 345 45.5
SGA_v2.0_scaffold5G02533 Striga asiatica HOM05D007180 ORTHO05D009028 5.9e-81 305.4 340 49.7
Pp3c4_2280 Physcomitrium patens HOM05D007180 ORTHO05D009028 4.7e-78 295.8 343 43.7
SEGI_07196 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 3.9e-77 292.7 339 43.7
SEGI_18381 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 3.9e-77 292.7 339 43.7
ECA232G5021 Erigeron canadensis HOM05D000415 ORTHO05D001916 9.7e-76 288.1 223 62.8
Pp3c3_33050 Physcomitrium patens HOM05D007180 ORTHO05D009028 9.7e-76 288.1 330 44.8
Pp3c10_19810 Physcomitrium patens HOM05D007180 ORTHO05D009028 4.8e-75 285.8 340 43.5
Pp3c5_1000 Physcomitrium patens HOM05D007180 ORTHO05D009028 2.9e-72 276.6 341 41.9
Pp3c12_14730 Physcomitrium patens HOM05D007180 ORTHO05D009028 3.2e-71 273.1 328 43.6
Pp3c27_6190 Physcomitrium patens HOM05D007180 ORTHO05D009028 7.2e-71 271.9 329 42.6
unitig_748.g7435 Utricularia gibba HOM05D007180 ORTHO05D009028 3.6e-70 269.6 345 42.0
DCAR_016200 Daucus carota HOM05D007180 ORTHO05D009028 4.1e-66 256.1 337 42.4
SMO364G0215 Selaginella moellendorffii HOM05D007180 ORTHO05D009028 2.8e-59 233.4 213 52.1
Cpa.g.sc109.35 Carica papaya HOM05D007180 ORTHO05D009028 1.1e-58 231.5 331 42.9
FAN05G1983 Fragaria x ananassa HOM05D002582 ORTHO05D002781 1.1e-39 168.3 103 75.7
MBI04_g27060_MAGBIO Magnolia biondii HOM05D007180 ORTHO05D009028 2.6e-28 130.6 107 57.0
FAN09G3228 Fragaria x ananassa HOM05D007180 ORTHO05D009028 3.2e-26 123.6 113 57.5
vmacro02767 Vaccinium macrocarpon HOM05D063291 ORTHO05D009028 1.9e-07 61.2 40 70.0


User provided reference genes

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