Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.BKX7X4 Arachis hypogaea HOM05D005697 ORTHO05D006951 1.5e-116 422.9 227 100.0
arahy.Tifrunner.gnm1.ann1.1SMG72 Arachis hypogaea HOM05D005697 ORTHO05D006951 3.6e-110 401.7 233 94.4
Glyma.20G081000 Glycine max HOM05D005697 ORTHO05D006951 1.4e-85 320.1 227 77.1
Glyma.10G130200 Glycine max HOM05D005697 ORTHO05D006951 7.1e-82 307.8 227 76.7
VMungo0720G1671 Vigna mungo HOM05D005697 ORTHO05D006951 3.4e-76 288.9 227 71.8
TPR.G23989 Trifolium pratense HOM05D005697 ORTHO05D006951 1.4e-74 283.5 230 69.6
Lalb_Chr03g0036851 Lupinus albus HOM05D005697 ORTHO05D006951 2.4e-69 266.2 224 68.3
Lj6g0023034 Lotus japonicus HOM05D005697 ORTHO05D006951 1.9e-66 256.5 227 67.0
Phvul.007G233100 Phaseolus vulgaris HOM05D005697 ORTHO05D006951 5.5e-66 255.0 188 76.1
Lalb_Chr19g0128591 Lupinus albus HOM05D005697 ORTHO05D006951 3.5e-65 252.3 194 72.7
Medtr1g046070 Medicago truncatula HOM05D005697 ORTHO05D006951 3.9e-64 248.8 232 63.4
CiPaw.01G174800 Carya illinoinensis HOM05D005697 ORTHO05D006951 6.1e-57 224.9 211 60.7
Prupe.1G054100 Prunus persica HOM05D005697 ORTHO05D006951 2.8e-54 216.1 220 60.5
QL06p022167 Quercus lobata HOM05D005697 ORTHO05D006951 2.8e-54 216.1 210 60.0
Haze_11516 Corylus avellana HOM05D005697 ORTHO05D006951 4.1e-53 212.2 212 58.5
Thecc.04G218700 Theobroma cacao HOM05D005697 ORTHO05D006951 4.1e-53 212.2 209 57.4
Haze_11522 Corylus avellana HOM05D005697 ORTHO05D006951 9.1e-53 211.1 212 58.0
FvH4_4g05260 Fragaria vesca HOM05D005697 ORTHO05D006951 1.2e-52 210.7 234 55.6
CiPaw.02G104000 Carya illinoinensis HOM05D005697 ORTHO05D006951 2.6e-52 209.5 216 56.5
RcHm_v2.0_Chr4g0396171 Rosa chinensis HOM05D005697 ORTHO05D006951 2.6e-52 209.5 233 54.9
FAN12G1366 Fragaria x ananassa HOM05D005697 ORTHO05D006951 4.5e-52 208.8 234 55.1
MD13G1226700 Malus domestica HOM05D005697 ORTHO05D006951 2.9e-51 206.1 241 53.5
FAN22G1047 Fragaria x ananassa HOM05D005697 ORTHO05D006951 1.9e-50 203.4 234 55.1
FAN07G2767 Fragaria x ananassa HOM05D005697 ORTHO05D006951 4.2e-50 202.2 234 54.7
FAN17G2424 Fragaria x ananassa HOM05D005697 ORTHO05D006951 2.1e-49 199.9 234 54.7
Duzib151G0493 Durio zibethinus HOM05D005697 ORTHO05D006951 1.4e-48 197.2 212 53.8
Cpa.g.sc59.48 Carica papaya HOM05D005697 ORTHO05D006951 2.0e-47 193.4 204 56.9
Atru.chr4.1856 Acer truncatum HOM05D005697 ORTHO05D006951 5.7e-47 191.8 236 49.2
Potri.010G062600 Populus trichocarpa HOM05D005697 ORTHO05D006951 2.8e-46 189.5 200 57.5
Sabra10G0044100 Salix brachista HOM05D005697 ORTHO05D006951 4.8e-46 188.7 204 55.4
Potri.008G174400 Populus trichocarpa HOM05D005697 ORTHO05D006951 6.3e-46 188.3 229 51.5
Cfa014837 Carpinus fangiana HOM05D005697 ORTHO05D006951 1.4e-45 187.2 219 53.4
Nn1g03052 Nelumbo nucifera HOM05D005697 ORTHO05D006951 1.4e-45 187.2 202 54.0
COL.COLO4_07143 Corchorus olitorius HOM05D005697 ORTHO05D006951 1.2e-44 184.1 214 52.3
ClCG06G017260 Citrullus lanatus HOM05D005697 ORTHO05D006951 2.0e-44 183.3 198 55.6
Duzib212G0179 Durio zibethinus HOM05D005697 ORTHO05D006951 2.0e-44 183.3 214 51.9
Eucgr.H02876 Eucalyptus grandis HOM05D005697 ORTHO05D006951 2.0e-44 183.3 212 54.2
Manes.15G047800 Manihot esculenta HOM05D005697 ORTHO05D006951 2.0e-44 183.3 212 52.4
CsaV3_1G001240 Cucumis sativus L. HOM05D005697 ORTHO05D006951 5.9e-44 181.8 195 54.4
Sed0003887 Sechium edule HOM05D005697 ORTHO05D006951 2.2e-43 179.9 194 52.6
TWI09G0842 Tripterygium wilfordii HOM05D005697 ORTHO05D006951 2.2e-43 179.9 217 53.0
CANSAT78G1745 Cannabis sativa HOM05D005697 ORTHO05D006951 2.9e-43 179.5 208 50.5
TWI53G2060 Tripterygium wilfordii HOM05D005697 ORTHO05D006951 2.9e-43 179.5 224 49.6
Sabra08G0132900 Salix brachista HOM05D005697 ORTHO05D006951 8.5e-43 177.9 215 52.1
TAR365G1050 Trochodendron aralioides HOM05D005697 ORTHO05D006951 1.9e-42 176.8 225 47.6
Manes.03G155600 Manihot esculenta HOM05D005697 ORTHO05D006951 4.2e-42 175.6 199 53.3
MBI07_g15425_MAGBIO Magnolia biondii HOM05D005697 ORTHO05D006951 9.4e-42 174.5 214 50.5
Dinv27139 Davidia involucrata HOM05D005697 ORTHO05D006951 1.6e-41 173.7 223 48.9
Gorai.006G218600 Gossypium raimondii HOM05D005697 ORTHO05D006951 4.7e-41 172.2 231 48.5
Hund24861 Selenicereus undatus HOM05D005697 ORTHO05D006951 6.1e-41 171.8 198 51.0
AUR62035897 Chenopodium quinoa HOM05D005697 ORTHO05D006951 8.0e-41 171.4 227 49.3
AUR62035343 Chenopodium quinoa HOM05D005697 ORTHO05D006951 2.3e-40 169.9 199 50.8
Gohir.D09G195200 Gossypium hirsutum HOM05D005697 ORTHO05D006951 2.3e-40 169.9 231 48.5
vmacro15494 Vaccinium macrocarpon HOM05D005697 ORTHO05D006951 6.7e-40 168.3 222 47.3
Sed0013611 Sechium edule HOM05D005697 ORTHO05D006951 2.0e-39 166.8 211 50.7
Rhsim02G0049300 Rhododendron simsii HOM05D005697 ORTHO05D006951 5.7e-39 165.2 189 52.4
Cc03_g06970 Coffea canephora HOM05D005697 ORTHO05D006951 9.7e-39 164.5 218 47.2
MELO3C026270.2 Cucumis melo HOM05D005697 ORTHO05D006951 1.7e-38 163.7 195 50.8
EL10Ac3g06730 Beta vulgaris HOM05D005697 ORTHO05D006951 6.3e-38 161.8 239 47.3
Oeu008818.1 Olea europaea HOM05D005697 ORTHO05D006951 6.3e-38 161.8 211 46.4
Lsat_1_v5_gn_6_67840 Lactuca sativa HOM05D005697 ORTHO05D006951 1.8e-37 160.2 206 47.1
TAR362G0923 Trochodendron aralioides HOM05D005697 ORTHO05D006951 2.4e-37 159.8 210 48.1
Oeu007537.1 Olea europaea HOM05D005697 ORTHO05D006951 5.3e-37 158.7 208 47.1
Nn3g19835 Nelumbo nucifera HOM05D005697 ORTHO05D006951 7.0e-37 158.3 221 46.6
Peaxi162Scf01007g00013 Petunia axillaris HOM05D005697 ORTHO05D006951 1.2e-36 157.5 221 43.4
Solyc09g091060.3 Solanum lycopersicum HOM05D005697 ORTHO05D006951 1.3e-35 154.1 214 44.4
DCAR_024305 Daucus carota HOM05D005697 ORTHO05D006951 3.8e-35 152.5 231 44.6
SalBow3G1865 Salvia bowleyana HOM05D005697 ORTHO05D006951 8.5e-35 151.4 218 44.0
SalBow3G3550 Salvia bowleyana HOM05D005697 ORTHO05D006951 8.5e-35 151.4 218 44.0
Gohir.A09G201000 Gossypium hirsutum HOM05D005697 ORTHO05D006951 1.1e-34 151.0 231 44.6
MSTRG.24645 Avicennia marina HOM05D005697 ORTHO05D006951 2.5e-34 149.8 228 47.4
Glyma.14G108200 Glycine max HOM05D005697 ORTHO05D006951 1.6e-33 147.1 114 69.3
Sopen09g034040 Solanum pennellii HOM05D005697 ORTHO05D006951 2.1e-33 146.7 214 43.0
Solyc12g097060.1 Solanum lycopersicum HOM05D005697 ORTHO05D006951 6.1e-33 145.2 219 42.9
Psat6g106680 Pisum sativum HOM05D005697 ORTHO05D006951 1.0e-32 144.4 105 72.4
CSS0038279 Camellia sinensis var. sinensis HOM05D005697 ORTHO05D006951 2.3e-32 143.3 252 41.7
Nitab4.5_0002738g0060 Nicotiana tabacum HOM05D005697 ORTHO05D006951 2.3e-32 143.3 205 45.4
CAN.G812.40 Capsicum annuum HOM05D005697 ORTHO05D006951 6.8e-32 141.7 218 41.7
PSO063G5372 Papaver somniferum HOM05D005697 ORTHO05D006951 1.5e-31 140.6 230 40.9
PGSC0003DMG400008629 Solanum tuberosum HOM05D005697 ORTHO05D006951 1.5e-31 140.6 212 42.0
Peaxi162Scf00125g01016 Petunia axillaris HOM05D005697 ORTHO05D006951 2.0e-31 140.2 224 43.3
ECA233G3140 Erigeron canadensis HOM05D005697 ORTHO05D006951 3.4e-31 139.4 175 49.7
PSO339G1845 Papaver somniferum HOM05D005697 ORTHO05D006951 3.4e-31 139.4 230 40.0
Nitab4.5_0001998g0050 Nicotiana tabacum HOM05D005697 ORTHO05D006951 2.2e-30 136.7 207 42.0
MSTRG.21934 Avicennia marina HOM05D005697 ORTHO05D006951 4.8e-30 135.6 215 44.7
Sc19g0005740 Simmondsia chinensis HOM05D005697 ORTHO05D006951 6.3e-30 135.2 159 52.2
Ah.13g075010 Amaranthus hybridus HOM05D005697 ORTHO05D006951 1.8e-29 133.7 243 41.2
GSVIVG01001870001 Vitis vinifera HOM05D005697 ORTHO05D006951 2.0e-28 130.2 127 57.5
Ciclev10005805m.g Citrus clementina HOM05D005697 ORTHO05D006951 1.0e-27 127.9 160 48.8
THA.LOC104804567 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 2.9e-27 126.3 187 46.5
CDE05G2497 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 1.5e-26 124.0 224 38.8
Actinidia39942 Actinidia chinensis HOM05D005697 ORTHO05D006951 2.1e-25 120.2 175 48.0
THA.LOC104808734 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 2.7e-25 119.8 222 43.2
THA.LOC104821627 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 2.3e-24 116.7 176 46.6
CARHR219170 Cardamine hirsuta HOM05D005697 ORTHO05D006951 6.8e-24 115.2 208 42.8
Actinidia11384 Actinidia chinensis HOM05D005697 ORTHO05D006951 1.5e-23 114.0 99 59.6
BcaC02g09418 Brassica carinata HOM05D005697 ORTHO05D006951 2.6e-23 113.2 208 41.3
BolC4t25821H Brassica oleracea HOM05D005697 ORTHO05D006951 2.6e-23 113.2 208 41.3
Migut.N00325 Erythranthe guttata HOM05D005697 ORTHO05D006951 2.6e-23 113.2 200 40.5
A04p08640 Brassica napus HOM05D005697 ORTHO05D006951 9.8e-23 111.3 167 46.7
C04p42400 Brassica napus HOM05D005697 ORTHO05D006951 1.7e-22 110.5 208 40.9
AT4G13540 Arabidopsis thaliana HOM05D005697 ORTHO05D006951 2.8e-22 109.8 209 41.1
AL7G43130 Arabidopsis lyrata HOM05D005697 ORTHO05D006951 4.9e-22 109.0 208 41.8
Carub.0007s2900 Capsella rubella HOM05D005697 ORTHO05D006951 4.9e-22 109.0 209 40.7
CDE02G0931 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 4.9e-22 109.0 185 39.5
Sp7g11140 Schrenkiella parvula HOM05D005697 ORTHO05D006951 6.3e-22 108.6 218 39.9
BcaB06g26605 Brassica carinata HOM05D005697 ORTHO05D006951 1.1e-21 107.8 221 43.0
Thhalv10026312m.g Eutrema salsugineum HOM05D005697 ORTHO05D006951 1.4e-21 107.5 205 41.0
CARHR100340 Cardamine hirsuta HOM05D005697 ORTHO05D006951 2.4e-21 106.7 185 43.2
BcaB03g16086 Brassica carinata HOM05D005697 ORTHO05D006951 4.1e-21 105.9 208 40.9
BraA07t28595Z Brassica rapa HOM05D005697 ORTHO05D006951 7.0e-21 105.1 219 42.0
Aa31LG9G4120 Aethionema arabicum HOM05D005697 ORTHO05D006951 2.0e-20 103.6 210 41.9
SGA_v2.0_scaffold31G12607 Striga asiatica HOM05D005697 ORTHO05D006951 2.3e-19 100.1 211 36.0
BcaC06g35669 Brassica carinata HOM05D005697 ORTHO05D006951 2.9e-19 99.8 219 41.1
C07p12260 Brassica napus HOM05D005697 ORTHO05D006951 2.9e-19 99.8 219 41.1
BolC7t41693H Brassica oleracea HOM05D005697 ORTHO05D006951 2.9e-19 99.8 219 41.1
A07p08110 Brassica napus HOM05D005697 ORTHO05D006951 3.8e-19 99.4 234 39.7
PGSC0003DMG400011585 Solanum tuberosum HOM05D005697 ORTHO05D006951 4.3e-18 95.9 146 41.1
AT3G23930 Arabidopsis thaliana HOM05D005697 ORTHO05D006951 4.7e-17 92.4 114 50.9
Carub.0003s2459 Capsella rubella HOM05D005697 ORTHO05D006951 2.3e-16 90.1 114 50.9
CAN.G566.3 Capsicum annuum HOM05D005697 ORTHO05D006951 3.0e-16 89.7 125 43.2
HPP92_005453 Vanilla planifolia HOM05D005697 ORTHO05D006951 1.2e-15 87.8 214 36.9
Aa31LG8G10940 Aethionema arabicum HOM05D005697 ORTHO05D006951 2.0e-15 87.0 178 40.4
Nitab4.5_0000451g0070 Nicotiana tabacum HOM05D005697 ORTHO05D006951 2.0e-15 87.0 121 44.6
unitig_26.g9545 Utricularia gibba HOM05D005697 ORTHO05D006951 2.6e-15 86.7 205 33.2
BraA04t16558Z Brassica rapa HOM05D005697 ORTHO05D006951 7.5e-15 85.1 131 44.3
AL3G39620 Arabidopsis lyrata HOM05D005697 ORTHO05D006951 9.8e-15 84.7 116 48.3
Thhalv10002645m.g Eutrema salsugineum HOM05D005697 ORTHO05D006951 9.8e-15 84.7 217 37.8
CDE08G0630 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 8.3e-14 81.6 142 37.3
Sp3g22030 Schrenkiella parvula HOM05D005697 ORTHO05D006951 9.2e-13 78.2 223 36.3
Nitab4.5_0000867g0050 Nicotiana tabacum HOM05D005697 ORTHO05D006951 1.4e-08 64.3 122 36.9
ATR0088G022 Amborella trichopoda HOM05D005697 ORTHO05D006951 8.3e-06 55.1 143 33.6


User provided reference genes

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