Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.BKS1TA Arachis hypogaea HOM05D003182 ORTHO05D003829 1.0e-44 183.0 90 100.0
arahy.Tifrunner.gnm1.ann1.005C3Q Arachis hypogaea HOM05D003182 ORTHO05D003829 1.9e-30 135.6 64 96.9
arahy.Tifrunner.gnm1.ann1.P43H24 Arachis hypogaea HOM05D003182 ORTHO05D003829 4.4e-27 124.4 64 89.1
arahy.Tifrunner.gnm1.ann1.3N6FKX Arachis hypogaea HOM05D003182 ORTHO05D003829 1.3e-26 122.9 64 89.1
Lalb_Chr05g0228151 Lupinus albus HOM05D003182 ORTHO05D003829 1.6e-21 105.9 59 81.4
Hma1.2p1_0867F.1_g230210 Hydrangea macrophylla HOM05D003182 ORTHO05D003829 2.8e-21 105.1 62 75.8
SGA_v2.0_scaffold165G38249 Striga asiatica HOM05D003182 ORTHO05D003829 2.8e-21 105.1 64 73.4
Cc11_g14640 Coffea canephora HOM05D003182 ORTHO05D003829 6.2e-21 104.0 61 78.7
Lj3C1051T18 Lonicera japonica HOM05D003182 ORTHO05D003829 6.2e-21 104.0 64 70.3
Dinv15303 Davidia involucrata HOM05D003182 ORTHO05D003829 8.1e-21 103.6 64 71.9
Oeu003450.3 Olea europaea HOM05D003182 ORTHO05D003829 8.1e-21 103.6 64 73.4
RcHm_v2.0_Chr4g0443921 Rosa chinensis HOM05D003182 ORTHO05D003829 1.1e-20 103.2 64 71.9
Migut.L01410 Erythranthe guttata HOM05D003182 ORTHO05D003829 1.8e-20 102.4 64 73.4
Atru.chr11.2009 Acer truncatum HOM05D003182 ORTHO05D003829 2.4e-20 102.1 64 68.8
SalBow2G3598 Salvia bowleyana HOM05D003182 ORTHO05D003829 2.4e-20 102.1 64 71.9
Dinv24862 Davidia involucrata HOM05D003182 ORTHO05D003829 3.1e-20 101.7 64 70.3
Manes.15G182900 Manihot esculenta HOM05D003182 ORTHO05D003829 8.9e-20 100.1 64 64.1
Atru.chr11.2016 Acer truncatum HOM05D003182 ORTHO05D003829 1.2e-19 99.8 64 70.3
DCAR_007091 Daucus carota HOM05D003182 ORTHO05D003829 1.2e-19 99.8 64 67.2
Peaxi162Scf00338g00024 Petunia axillaris HOM05D003182 ORTHO05D003829 1.5e-19 99.4 64 71.9
Ca_04599_v3 Cicer arietinum L. HOM05D003182 ORTHO05D003829 2.0e-19 99.0 64 67.2
Nn3g16899 Nelumbo nucifera HOM05D003182 ORTHO05D003829 2.0e-19 99.0 64 62.5
Atru.chr6.2291 Acer truncatum HOM05D003182 ORTHO05D003829 2.6e-19 98.6 64 64.1
CSS0021280 Camellia sinensis var. sinensis HOM05D003182 ORTHO05D003829 2.6e-19 98.6 64 68.8
CSS0050117 Camellia sinensis var. sinensis HOM05D003182 ORTHO05D003829 2.6e-19 98.6 64 68.8
CAN.G376.8 Capsicum annuum HOM05D003182 ORTHO05D003829 2.6e-19 98.6 66 69.7
Haze_12174 Corylus avellana HOM05D003182 ORTHO05D003829 2.6e-19 98.6 64 67.2
Medtr5g034420 Medicago truncatula HOM05D003182 ORTHO05D003829 2.6e-19 98.6 67 68.7
Psat2g106920 Pisum sativum HOM05D003182 ORTHO05D003829 2.6e-19 98.6 64 68.8
GSVIVG01020236001 Vitis vinifera HOM05D003182 ORTHO05D003829 2.6e-19 98.6 64 68.8
Aqoxy3G02981 Aquilegia oxysepala HOM05D003182 ORTHO05D003829 3.4e-19 98.2 64 60.9
PGR083G0239 Punica granatum HOM05D003182 ORTHO05D003829 3.4e-19 98.2 64 64.1
TAR374G1615 Trochodendron aralioides HOM05D003182 ORTHO05D003829 3.4e-19 98.2 64 65.6
HPP92_003803 Vanilla planifolia HOM05D003182 ORTHO05D003829 3.4e-19 98.2 64 65.6
Actinidia08167 Actinidia chinensis HOM05D003182 ORTHO05D003829 4.4e-19 97.8 64 67.2
arahy.Tifrunner.gnm1.ann1.5NVD8S Arachis hypogaea HOM05D003182 ORTHO05D003829 4.4e-19 97.8 64 59.4
Manes.12G029366 Manihot esculenta HOM05D003182 ORTHO05D003829 4.4e-19 97.8 64 67.2
Medtr6g007210 Medicago truncatula HOM05D003182 ORTHO05D003829 4.4e-19 97.8 64 64.1
Sc11g0001200 Simmondsia chinensis HOM05D003182 ORTHO05D003829 5.8e-19 97.4 61 68.9
PGSC0003DMG400030991 Solanum tuberosum HOM05D003182 ORTHO05D003829 5.8e-19 97.4 64 70.3
arahy.Tifrunner.gnm1.ann1.L7KCN6 Arachis hypogaea HOM05D003182 ORTHO05D003829 7.6e-19 97.1 64 59.4
arahy.Tifrunner.gnm1.ann1.ZL6HLN Arachis hypogaea HOM05D003182 ORTHO05D003829 7.6e-19 97.1 64 59.4
Duzib248G0927 Durio zibethinus HOM05D003182 ORTHO05D003829 7.6e-19 97.1 64 65.6
unitig_8.g3167 Utricularia gibba HOM05D003182 ORTHO05D003829 7.6e-19 97.1 64 70.3
C04p46940 Brassica napus HOM05D003182 ORTHO05D003829 9.9e-19 96.7 64 62.5
BolC4t26288H Brassica oleracea HOM05D003182 ORTHO05D003829 9.9e-19 96.7 64 62.5
Ciclev10017499m.g Citrus clementina HOM05D003182 ORTHO05D003829 9.9e-19 96.7 64 64.1
SEGI_37434 Sequoiadendron giganteum HOM05D003182 ORTHO05D003829 9.9e-19 96.7 64 62.5
GSVIVG01032486001 Vitis vinifera HOM05D003182 ORTHO05D003829 9.9e-19 96.7 64 62.5
Actinidia01705 Actinidia chinensis HOM05D003182 ORTHO05D003829 1.3e-18 96.3 64 65.6
COL.COLO4_36968 Corchorus olitorius HOM05D003182 ORTHO05D003829 1.3e-18 96.3 64 65.6
MBI16_g36058_MAGBIO Magnolia biondii HOM05D003182 ORTHO05D003829 1.3e-18 96.3 64 62.5
Nitab4.5_0000113g0300 Nicotiana tabacum HOM05D003182 ORTHO05D003829 1.3e-18 96.3 64 70.3
TPR.G2315 Trifolium pratense HOM05D003182 ORTHO05D003829 1.3e-18 96.3 64 60.9
Dinv35057 Davidia involucrata HOM05D003182 ORTHO05D003829 1.7e-18 95.9 64 62.5
Lju41C35G6 Lonicera japonica HOM05D003182 ORTHO05D003829 1.7e-18 95.9 64 59.4
VMungo0464G0504 Vigna mungo HOM05D003182 ORTHO05D003829 1.7e-18 95.9 64 60.9
Ah.04g163460 Amaranthus hybridus HOM05D003182 ORTHO05D003829 2.2e-18 95.5 64 60.9
A04p13190 Brassica napus HOM05D003182 ORTHO05D003829 2.2e-18 95.5 64 62.5
BraA04t16978Z Brassica rapa HOM05D003182 ORTHO05D003829 2.2e-18 95.5 64 62.5
CDE04G2631 Ceratophyllum demersum HOM05D003182 ORTHO05D003829 2.2e-18 95.5 59 66.1
Thhalv10027741m.g Eutrema salsugineum HOM05D003182 ORTHO05D003829 2.2e-18 95.5 64 64.1
Carub.0007s3536 Capsella rubella HOM05D003182 ORTHO05D003829 2.9e-18 95.1 64 60.9
ECA233G4670 Erigeron canadensis HOM05D003182 ORTHO05D003829 2.9e-18 95.1 68 64.7
Eucgr.J02205 Eucalyptus grandis HOM05D003182 ORTHO05D003829 2.9e-18 95.1 84 53.6
Glyma.19G009400 Glycine max HOM05D003182 ORTHO05D003829 2.9e-18 95.1 64 57.8
Lsat_1_v5_gn_8_157280 Lactuca sativa HOM05D003182 ORTHO05D003829 2.9e-18 95.1 83 56.6
MD16G1092000 Malus domestica HOM05D003182 ORTHO05D003829 2.9e-18 95.1 64 65.6
RcHm_v2.0_Chr2g0171401 Rosa chinensis HOM05D003182 ORTHO05D003829 2.9e-18 95.1 64 62.5
Sc16g0005420 Simmondsia chinensis HOM05D003182 ORTHO05D003829 2.9e-18 95.1 59 66.1
BcaB06g27467 Brassica carinata HOM05D003182 ORTHO05D003829 3.8e-18 94.7 64 62.5
MELO3C009954.2 Cucumis melo HOM05D003182 ORTHO05D003829 3.8e-18 94.7 64 62.5
DCAR_011207 Daucus carota HOM05D003182 ORTHO05D003829 3.8e-18 94.7 64 59.4
HanXRQChr12g0368591 Helianthus annuus HOM05D003182 ORTHO05D003829 3.8e-18 94.7 84 57.1
EL10Ac6g13670 Beta vulgaris HOM05D003182 ORTHO05D003829 4.9e-18 94.4 64 62.5
CiPaw.05G150700 Carya illinoinensis HOM05D003182 ORTHO05D003829 4.9e-18 94.4 59 74.6
CsaV3_3G042400 Cucumis sativus L. HOM05D003182 ORTHO05D003829 4.9e-18 94.4 64 62.5
Actinidia27785 Actinidia chinensis HOM05D003182 ORTHO05D003829 6.4e-18 94.0 63 65.1
ATR0730G138 Amborella trichopoda HOM05D003182 ORTHO05D003829 6.4e-18 94.0 64 60.9
CSS0022412 Camellia sinensis var. sinensis HOM05D003182 ORTHO05D003829 6.4e-18 94.0 64 59.4
FvH4_6g50610 Fragaria vesca HOM05D003182 ORTHO05D003829 6.4e-18 94.0 64 62.5
FAN02G2729 Fragaria x ananassa HOM05D003182 ORTHO05D003829 6.4e-18 94.0 64 62.5
FAN09G2145 Fragaria x ananassa HOM05D003182 ORTHO05D003829 6.4e-18 94.0 64 62.5
FAN14G0389 Fragaria x ananassa HOM05D003182 ORTHO05D003829 6.4e-18 94.0 64 62.5
FAN14G5751 Fragaria x ananassa HOM05D003182 ORTHO05D003829 6.4e-18 94.0 64 62.5
Potri.009G147800 Populus trichocarpa HOM05D003182 ORTHO05D003829 6.4e-18 94.0 64 57.8
Sabra09G0116500 Salix brachista HOM05D003182 ORTHO05D003829 6.4e-18 94.0 64 57.8
Thecc.04G008600 Theobroma cacao HOM05D003182 ORTHO05D003829 6.4e-18 94.0 64 60.9
FvH4_4g34540 Fragaria vesca HOM05D003182 ORTHO05D003829 8.4e-18 93.6 61 68.9
FAN12G1714 Fragaria x ananassa HOM05D003182 ORTHO05D003829 8.4e-18 93.6 61 68.9
Phvul.004G016800 Phaseolus vulgaris HOM05D003182 ORTHO05D003829 8.4e-18 93.6 64 59.4
RhsimUnG0091000 Rhododendron simsii HOM05D003182 ORTHO05D003829 8.4e-18 93.6 64 64.1
Hund05992 Selenicereus undatus HOM05D003182 ORTHO05D003829 8.4e-18 93.6 64 62.5
TAR622G1170 Trochodendron aralioides HOM05D003182 ORTHO05D003829 8.4e-18 93.6 64 62.5
Ca_04201_v3 Cicer arietinum L. HOM05D003182 ORTHO05D003829 1.1e-17 93.2 64 57.8
Sabra09G0114000 Salix brachista HOM05D003182 ORTHO05D003829 1.1e-17 93.2 59 62.7
Sp7g01670 Schrenkiella parvula HOM05D003182 ORTHO05D003829 1.1e-17 93.2 64 60.9
Sopen05g001610 Solanum pennellii HOM05D003182 ORTHO05D003829 1.1e-17 93.2 64 67.2
SGA_v2.0_scaffold205G41704 Striga asiatica HOM05D003182 ORTHO05D003829 1.1e-17 93.2 72 55.6
THA.LOC104805399 Tarenaya hassleriana HOM05D003182 ORTHO05D003829 1.1e-17 93.2 64 62.5
MSTRG.24015 Avicennia marina HOM05D003182 ORTHO05D003829 1.4e-17 92.8 70 58.6
Gohir.D02G162900 Gossypium hirsutum HOM05D003182 ORTHO05D003829 1.4e-17 92.8 64 62.5
Gorai.005G182900 Gossypium raimondii HOM05D003182 ORTHO05D003829 1.4e-17 92.8 64 62.5
Lalb_Chr02g0160081 Lupinus albus HOM05D003182 ORTHO05D003829 1.4e-17 92.8 64 56.2
Lalb_Chr02g0160261 Lupinus albus HOM05D003182 ORTHO05D003829 1.4e-17 92.8 64 56.2
PGR119G1400 Punica granatum HOM05D003182 ORTHO05D003829 1.4e-17 92.8 66 60.6
ClCG10G014240 Citrullus lanatus HOM05D003182 ORTHO05D003829 1.9e-17 92.4 64 60.9
FAN05G3372 Fragaria x ananassa HOM05D003182 ORTHO05D003829 1.9e-17 92.4 64 60.9
FAN22G1320 Fragaria x ananassa HOM05D003182 ORTHO05D003829 1.9e-17 92.4 61 67.2
AL7G49710 Arabidopsis lyrata HOM05D003182 ORTHO05D003829 2.4e-17 92.0 64 59.4
Duzib147G1033 Durio zibethinus HOM05D003182 ORTHO05D003829 2.4e-17 92.0 64 57.8
Glyma.02G034400 Glycine max HOM05D003182 ORTHO05D003829 2.4e-17 92.0 64 65.6
TWI56G0688 Tripterygium wilfordii HOM05D003182 ORTHO05D003829 2.4e-17 92.0 64 60.9
AT5G40290 Arabidopsis thaliana HOM05D003182 ORTHO05D003829 3.2e-17 91.7 64 59.4
CiPaw.03G037600 Carya illinoinensis HOM05D003182 ORTHO05D003829 3.2e-17 91.7 64 60.9
Ciclev10031446m.g Citrus clementina HOM05D003182 ORTHO05D003829 3.2e-17 91.7 64 64.1
DCAR_031100 Daucus carota HOM05D003182 ORTHO05D003829 3.2e-17 91.7 59 64.4
Glyma.13G169200 Glycine max HOM05D003182 ORTHO05D003829 3.2e-17 91.7 64 56.2
Thecc.02G248300 Theobroma cacao HOM05D003182 ORTHO05D003829 3.2e-17 91.7 64 62.5
vmacro01182 Vaccinium macrocarpon HOM05D003182 ORTHO05D003829 3.2e-17 91.7 64 62.5
CANSAT01G2334 Cannabis sativa HOM05D003182 ORTHO05D003829 4.2e-17 91.3 61 67.2
COL.COLO4_28945 Corchorus olitorius HOM05D003182 ORTHO05D003829 4.2e-17 91.3 64 57.8
Rhsim08G0055300 Rhododendron simsii HOM05D003182 ORTHO05D003829 4.2e-17 91.3 64 59.4
Hund25344 Selenicereus undatus HOM05D003182 ORTHO05D003829 4.2e-17 91.3 64 60.9
Solyc05g005600.1 Solanum lycopersicum HOM05D003182 ORTHO05D003829 4.2e-17 91.3 64 65.6
SGA_v2.0_scaffold135G34859 Striga asiatica HOM05D003182 ORTHO05D003829 4.2e-17 91.3 72 52.8
THA.LOC104825287 Tarenaya hassleriana HOM05D003182 ORTHO05D003829 4.2e-17 91.3 84 51.2
TPR.G13577 Trifolium pratense HOM05D003182 ORTHO05D003829 4.2e-17 91.3 59 69.5
EL10Ac4g08569 Beta vulgaris HOM05D003182 ORTHO05D003829 5.4e-17 90.9 64 57.8
AUR62014036 Chenopodium quinoa HOM05D003182 ORTHO05D003829 5.4e-17 90.9 64 59.4
Cc07_g02310 Coffea canephora HOM05D003182 ORTHO05D003829 5.4e-17 90.9 71 54.9
Prupe.1G254300 Prunus persica HOM05D003182 ORTHO05D003829 5.4e-17 90.9 64 62.5
Sed0022900 Sechium edule HOM05D003182 ORTHO05D003829 5.4e-17 90.9 64 59.4
Prupe.3G283700 Prunus persica HOM05D003182 ORTHO05D003829 7.1e-17 90.5 64 59.4
Haze_14666 Corylus avellana HOM05D003182 ORTHO05D003829 9.2e-17 90.1 64 62.5
Lj2g0017775 Lotus japonicus HOM05D003182 ORTHO05D003829 9.2e-17 90.1 64 59.4
MD09G1034800 Malus domestica HOM05D003182 ORTHO05D003829 9.2e-17 90.1 64 59.4
Nitab4.5_0003337g0070 Nicotiana tabacum HOM05D003182 ORTHO05D003829 9.2e-17 90.1 71 59.2
Nitab4.5_0005176g0070 Nicotiana tabacum HOM05D003182 ORTHO05D003829 9.2e-17 90.1 71 57.7
vmacro18240 Vaccinium macrocarpon HOM05D003182 ORTHO05D003829 9.2e-17 90.1 64 59.4
AT5G40270 Arabidopsis thaliana HOM05D003182 ORTHO05D003829 1.2e-16 89.7 64 59.4
Gohir.A03G140101 Gossypium hirsutum HOM05D003182 ORTHO05D003829 1.2e-16 89.7 64 60.9
Oeu043063.1 Olea europaea HOM05D003182 ORTHO05D003829 1.2e-16 89.7 64 53.1
PSO063G3727 Papaver somniferum HOM05D003182 ORTHO05D003829 1.2e-16 89.7 64 59.4
PSO832G1777 Papaver somniferum HOM05D003182 ORTHO05D003829 1.2e-16 89.7 64 59.4
Rhsim12G0047300 Rhododendron simsii HOM05D003182 ORTHO05D003829 1.2e-16 89.7 64 62.5
Sabra08G0144400 Salix brachista HOM05D003182 ORTHO05D003829 1.2e-16 89.7 64 62.5
TWI18G0345 Tripterygium wilfordii HOM05D003182 ORTHO05D003829 1.2e-16 89.7 64 60.9
AL7G49680 Arabidopsis lyrata HOM05D003182 ORTHO05D003829 1.6e-16 89.4 64 56.2
AUR62005374 Chenopodium quinoa HOM05D003182 ORTHO05D003829 2.1e-16 89.0 59 64.4
Gohir.D11G071300 Gossypium hirsutum HOM05D003182 ORTHO05D003829 2.1e-16 89.0 64 56.2
Gorai.007G076600 Gossypium raimondii HOM05D003182 ORTHO05D003829 2.1e-16 89.0 64 56.2
Potri.008G190200 Populus trichocarpa HOM05D003182 ORTHO05D003829 2.1e-16 89.0 64 62.5
Aa31LG9G1350 Aethionema arabicum HOM05D003182 ORTHO05D003829 2.7e-16 88.6 64 56.2
CANSAT64G2540 Cannabis sativa HOM05D003182 ORTHO05D003829 2.7e-16 88.6 64 57.8
Cpa.g.sc39.93 Carica papaya HOM05D003182 ORTHO05D003829 2.7e-16 88.6 56 66.1
Actinidia35739 Actinidia chinensis HOM05D003182 ORTHO05D003829 3.5e-16 88.2 64 54.7
Ah.02g129910 Amaranthus hybridus HOM05D003182 ORTHO05D003829 3.5e-16 88.2 64 59.4
CARHR261820 Cardamine hirsuta HOM05D003182 ORTHO05D003829 3.5e-16 88.2 64 59.4
Peaxi162Scf00129g01034 Petunia axillaris HOM05D003182 ORTHO05D003829 3.5e-16 88.2 59 66.1
unitig_62.g23158 Utricularia gibba HOM05D003182 ORTHO05D003829 3.5e-16 88.2 64 57.8
FAN07G1249 Fragaria x ananassa HOM05D003182 ORTHO05D003829 4.6e-16 87.8 72 56.9
SMO141G0095 Selaginella moellendorffii HOM05D003182 ORTHO05D003829 4.6e-16 87.8 66 59.1
Gohir.A11G067400 Gossypium hirsutum HOM05D003182 ORTHO05D003829 6.0e-16 87.4 64 54.7
Mapoly0016s0133 Marchantia polymorpha HOM05D003182 ORTHO05D003829 6.0e-16 87.4 64 56.2
Migut.H00124 Erythranthe guttata HOM05D003182 ORTHO05D003829 7.8e-16 87.0 70 52.9
SMO170G0050 Selaginella moellendorffii HOM05D003182 ORTHO05D003829 7.8e-16 87.0 69 56.5
CAN.G206.33 Capsicum annuum HOM05D003182 ORTHO05D003829 1.3e-15 86.3 65 58.5
PGSC0003DMG402000497 Solanum tuberosum HOM05D003182 ORTHO05D003829 1.3e-15 86.3 64 59.4
QL02p076707 Quercus lobata HOM05D003182 ORTHO05D003829 3.0e-15 85.1 64 56.2
Solyc02g086900.4 Solanum lycopersicum HOM05D003182 ORTHO05D003829 3.0e-15 85.1 64 57.8
Sopen02g031670 Solanum pennellii HOM05D003182 ORTHO05D003829 3.0e-15 85.1 64 57.8
PGSC0003DMG401000497 Solanum tuberosum HOM05D003182 ORTHO05D003829 3.0e-15 85.1 59 64.4
Pp3c17_2920 Physcomitrium patens HOM05D003182 ORTHO05D003829 6.6e-15 84.0 64 56.2
Zm00001eb126510 Zea mays HOM05D003182 ORTHO05D003829 1.9e-14 82.4 61 59.0
SMO356G0066 Selaginella moellendorffii HOM05D003182 ORTHO05D003829 1.2e-13 79.7 64 56.2
Os01g0109300 Oryza sativa ssp. japonica HOM05D003182 ORTHO05D003829 1.6e-13 79.3 64 53.1
Zm00001eb334290 Zea mays HOM05D003182 ORTHO05D003829 3.6e-13 78.2 59 59.3
PRCOL_00005819 Prasinoderma coloniale HOM05D003182 ORTHO05D003829 4.4e-11 71.2 68 50.0
Oeu018700.3 Olea europaea HOM05D003182 ORTHO05D003829 8.4e-10 67.0 90 41.1
MCO11G698 Micromonas commoda HOM05D003182 ORTHO05D003829 1.2e-08 63.2 76 40.8
arahy.Tifrunner.gnm1.ann1.B34LYU Arachis hypogaea HOM05D003182 ORTHO05D003829 6.0e-08 60.8 28 92.9
Cpa.g.sc69.28 Carica papaya HOM05D003182 ORTHO05D003829 5.6e-06 54.3 29 75.9
Cre09.g409801 Chlamydomonas reinhardtii HOM05D003182 ORTHO05D003829 9.6e-06 53.5 73 38.4


User provided reference genes

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