Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.BEL8LE Arachis hypogaea HOM05D000023 ORTHO05D002750 3.4e-92 341.7 174 100.0
arahy.Tifrunner.gnm1.ann1.H35DJI Arachis hypogaea HOM05D000023 ORTHO05D002750 1.9e-58 229.6 204 66.7
arahy.Tifrunner.gnm1.ann1.1A1CKU Arachis hypogaea HOM05D000023 ORTHO05D000014 7.9e-57 224.2 204 62.7
arahy.Tifrunner.gnm1.ann1.TR6CUS Arachis hypogaea HOM05D000023 ORTHO05D000014 3.0e-56 222.2 204 62.7
arahy.Tifrunner.gnm1.ann1.8ZYM5I Arachis hypogaea HOM05D000023 ORTHO05D000014 6.7e-56 221.1 204 61.8
arahy.Tifrunner.gnm1.ann1.BDH6KM Arachis hypogaea HOM05D000023 ORTHO05D000014 6.7e-56 221.1 204 62.3
arahy.Tifrunner.gnm1.ann1.LM67GB Arachis hypogaea HOM05D000023 ORTHO05D000014 3.5e-44 182.2 191 56.5
arahy.Tifrunner.gnm1.ann1.JW9I8M Arachis hypogaea HOM05D000023 ORTHO05D002750 2.5e-42 176.0 190 57.4
arahy.Tifrunner.gnm1.ann1.4U464T Arachis hypogaea HOM05D000023 ORTHO05D000014 4.7e-41 171.8 197 56.9
arahy.Tifrunner.gnm1.ann1.A7X4FA Arachis hypogaea HOM05D000023 ORTHO05D000014 1.0e-40 170.6 180 57.2
arahy.Tifrunner.gnm1.ann1.267J95 Arachis hypogaea HOM05D000023 ORTHO05D000014 3.0e-40 169.1 204 52.0
arahy.Tifrunner.gnm1.ann1.0VDA6A Arachis hypogaea HOM05D000023 ORTHO05D000014 2.8e-38 162.5 147 66.0
arahy.Tifrunner.gnm1.ann1.7IR32M Arachis hypogaea HOM05D000023 ORTHO05D000014 4.5e-36 155.2 198 51.0
arahy.Tifrunner.gnm1.ann1.73CRYN Arachis hypogaea HOM05D000023 ORTHO05D000014 1.7e-35 153.3 115 73.9
arahy.Tifrunner.gnm1.ann1.76T3Y3 Arachis hypogaea HOM05D000023 ORTHO05D000014 8.5e-35 151.0 109 74.3
arahy.Tifrunner.gnm1.ann1.S4IY5A Arachis hypogaea HOM05D000023 ORTHO05D000014 3.2e-34 149.1 109 74.3
arahy.Tifrunner.gnm1.ann1.VS78B6 Arachis hypogaea HOM05D000023 ORTHO05D000014 7.5e-23 111.3 170 41.8
arahy.Tifrunner.gnm1.ann1.M9HV3F Arachis hypogaea HOM05D000023 ORTHO05D000014 2.8e-22 109.4 170 42.4
arahy.Tifrunner.gnm1.ann1.YCYQ9Q Arachis hypogaea HOM05D000023 ORTHO05D000014 3.7e-22 109.0 170 42.4
arahy.Tifrunner.gnm1.ann1.EKH796 Arachis hypogaea HOM05D000023 ORTHO05D000014 1.1e-21 107.5 165 41.8
Psat0s2862g0200 Pisum sativum HOM05D000023 ORTHO05D002750 1.8e-21 106.7 183 41.5
Phvul.007G137000 Phaseolus vulgaris HOM05D000023 ORTHO05D002750 3.1e-21 105.9 175 40.6
arahy.Tifrunner.gnm1.ann1.M4RITN Arachis hypogaea HOM05D000023 ORTHO05D000014 4.1e-21 105.5 169 42.0
arahy.Tifrunner.gnm1.ann1.CB97FM Arachis hypogaea HOM05D000023 ORTHO05D000014 7.0e-21 104.8 170 41.2
arahy.Tifrunner.gnm1.ann1.L2FX1G Arachis hypogaea HOM05D000023 ORTHO05D000014 1.3e-19 100.5 165 41.8
arahy.Tifrunner.gnm1.ann1.ZTC9IW Arachis hypogaea HOM05D000023 ORTHO05D002750 2.3e-19 99.8 178 41.6
Psat3g195360 Pisum sativum HOM05D000023 ORTHO05D002750 2.3e-19 99.8 172 41.3
arahy.Tifrunner.gnm1.ann1.PH2KI6 Arachis hypogaea HOM05D000023 ORTHO05D002750 2.5e-18 96.3 166 39.2
arahy.Tifrunner.gnm1.ann1.9438IN Arachis hypogaea HOM05D000023 ORTHO05D002750 5.6e-18 95.1 170 40.0
arahy.Tifrunner.gnm1.ann1.L4GJS9 Arachis hypogaea HOM05D000023 ORTHO05D000014 6.1e-17 91.7 171 33.3
PGR142G2542 Punica granatum HOM05D000023 ORTHO05D000014 1.8e-16 90.1 192 33.9
arahy.Tifrunner.gnm1.ann1.FK9547 Arachis hypogaea HOM05D000023 ORTHO05D000014 2.3e-16 89.7 174 33.3
PGR031G2723 Punica granatum HOM05D000023 ORTHO05D000014 2.3e-16 89.7 199 35.2
PGR102G0008 Punica granatum HOM05D000023 ORTHO05D000014 2.3e-16 89.7 192 33.9
PGR044G2632 Punica granatum HOM05D000023 ORTHO05D000014 4.0e-16 89.0 187 34.8
arahy.Tifrunner.gnm1.ann1.F05QJ0 Arachis hypogaea HOM05D000023 ORTHO05D000014 5.2e-16 88.6 171 32.7
arahy.Tifrunner.gnm1.ann1.0K28D6 Arachis hypogaea HOM05D000023 ORTHO05D000014 6.8e-16 88.2 171 32.7
arahy.Tifrunner.gnm1.ann1.WN5Q4L Arachis hypogaea HOM05D000023 ORTHO05D002750 6.8e-16 88.2 171 32.7
arahy.Tifrunner.gnm1.ann1.SNZ0M3 Arachis hypogaea HOM05D000023 ORTHO05D000014 8.9e-16 87.8 171 32.7
arahy.Tifrunner.gnm1.ann1.FNZK40 Arachis hypogaea HOM05D000023 ORTHO05D002750 1.2e-15 87.4 171 32.7
PGR004G2136 Punica granatum HOM05D000023 ORTHO05D000014 1.5e-15 87.0 192 33.9
PGR042G3428 Punica granatum HOM05D000023 ORTHO05D000014 2.0e-15 86.7 192 34.4
arahy.Tifrunner.gnm1.ann1.AECE52 Arachis hypogaea HOM05D000023 ORTHO05D000014 3.4e-15 85.9 171 32.7
TWI09G0787 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 3.4e-15 85.9 165 34.5
TWI38G0651 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 3.4e-15 85.9 165 34.5
TWI63G0881 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 3.4e-15 85.9 165 34.5
TWI63G1486 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 3.4e-15 85.9 165 34.5
TWI73G1202 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 3.4e-15 85.9 165 34.5
TWI81G1016 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 3.4e-15 85.9 165 34.5
arahy.Tifrunner.gnm1.ann1.90WA6W Arachis hypogaea HOM05D000023 ORTHO05D000014 5.8e-15 85.1 162 32.1
arahy.Tifrunner.gnm1.ann1.CR0MC9 Arachis hypogaea HOM05D000023 ORTHO05D000014 5.8e-15 85.1 171 32.2
Migut.A00455 Erythranthe guttata HOM05D000023 ORTHO05D000014 5.8e-15 85.1 160 35.6
arahy.Tifrunner.gnm1.ann1.6V4S4C Arachis hypogaea HOM05D000023 ORTHO05D000014 7.5e-15 84.7 171 31.6
Phvul.010G101300 Phaseolus vulgaris HOM05D000023 ORTHO05D002750 7.5e-15 84.7 186 31.7
arahy.Tifrunner.gnm1.ann1.NY0BH2 Arachis hypogaea HOM05D000023 ORTHO05D000014 1.3e-14 84.0 169 32.5
arahy.Tifrunner.gnm1.ann1.U56CX0 Arachis hypogaea HOM05D000023 ORTHO05D002750 1.3e-14 84.0 171 32.2
Lj2g0005504 Lotus japonicus HOM05D000023 ORTHO05D000014 1.3e-14 84.0 192 30.7
EL10Ac4g08562 Beta vulgaris HOM05D000023 ORTHO05D000014 1.7e-14 83.6 183 35.0
PGR102G0123 Punica granatum HOM05D000023 ORTHO05D000014 2.2e-14 83.2 192 32.8
PGR142G0273 Punica granatum HOM05D000023 ORTHO05D000014 2.2e-14 83.2 192 32.3
arahy.Tifrunner.gnm1.ann1.NE4L2N Arachis hypogaea HOM05D000023 ORTHO05D000014 2.9e-14 82.8 159 33.3
arahy.Tifrunner.gnm1.ann1.85V2S8 Arachis hypogaea HOM05D000023 ORTHO05D000014 6.4e-14 81.6 153 41.2
EL10Ac5g12068 Beta vulgaris HOM05D000023 ORTHO05D000014 1.1e-13 80.9 184 34.2
EL10Ac5g11764 Beta vulgaris HOM05D000023 ORTHO05D000014 2.4e-13 79.7 158 32.9
Psat7g023240 Pisum sativum HOM05D000023 ORTHO05D000014 1.2e-12 77.4 174 31.6
Psat7g195560 Pisum sativum HOM05D003065 ORTHO05D003802 1.2e-12 77.4 171 31.0
arahy.Tifrunner.gnm1.ann1.H7EX5A Arachis hypogaea HOM05D000023 ORTHO05D000014 2.0e-12 76.6 167 29.3
Lj1g0007652 Lotus japonicus HOM05D000023 ORTHO05D000014 2.0e-12 76.6 173 28.3
PGR044G1170 Punica granatum HOM05D000023 ORTHO05D000014 2.0e-12 76.6 192 33.3
Phvul.002G102700 Phaseolus vulgaris HOM05D000023 ORTHO05D002750 2.7e-12 76.3 177 31.1
arahy.Tifrunner.gnm1.ann1.81QLLK Arachis hypogaea HOM05D000023 ORTHO05D000014 3.5e-12 75.9 158 31.6
arahy.Tifrunner.gnm1.ann1.A80E9C Arachis hypogaea HOM05D000023 ORTHO05D002750 3.5e-12 75.9 152 30.3
TWI18G0310 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 3.5e-12 75.9 172 32.0
Psat6g192520 Pisum sativum HOM05D000023 ORTHO05D000014 6.0e-12 75.1 167 31.7
QL06p027029 Quercus lobata HOM05D000023 ORTHO05D000014 1.3e-11 73.9 173 30.1
QL06p051978 Quercus lobata HOM05D000023 ORTHO05D000014 1.3e-11 73.9 173 30.1
QL93p2004_0106 Quercus lobata HOM05D000023 ORTHO05D000014 1.3e-11 73.9 173 30.1
Lj2g0011725 Lotus japonicus HOM05D000023 ORTHO05D000014 3.9e-11 72.4 173 28.9
Phvul.001G085000 Phaseolus vulgaris HOM05D011816 ORTHO05D012474 1.5e-10 70.5 173 34.1
arahy.Tifrunner.gnm1.ann1.5VI8F7 Arachis hypogaea HOM05D000023 ORTHO05D000014 2.5e-10 69.7 74 51.4
arahy.Tifrunner.gnm1.ann1.TV2CKL Arachis hypogaea HOM05D000023 ORTHO05D000014 2.5e-10 69.7 80 51.2
arahy.Tifrunner.gnm1.ann1.YDA91A Arachis hypogaea HOM05D000023 ORTHO05D000014 2.5e-10 69.7 100 50.0
CSS0034207 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 4.3e-10 68.9 181 31.5
arahy.Tifrunner.gnm1.ann1.MQNH5H Arachis hypogaea HOM05D000023 ORTHO05D002750 5.6e-10 68.6 131 40.5
arahy.Tifrunner.gnm1.ann1.HGRY1C Arachis hypogaea HOM05D000023 ORTHO05D002750 1.6e-09 67.0 160 33.8
arahy.Tifrunner.gnm1.ann1.4CHZ3Z Arachis hypogaea HOM05D000023 ORTHO05D000014 2.1e-09 66.6 170 34.1
arahy.Tifrunner.gnm1.ann1.XA5JQ3 Arachis hypogaea HOM05D000023 ORTHO05D000014 2.1e-09 66.6 72 51.4
arahy.Tifrunner.gnm1.ann1.NA6FIB Arachis hypogaea HOM05D000023 ORTHO05D000014 2.8e-09 66.2 157 35.7
arahy.Tifrunner.gnm1.ann1.RDT0WI Arachis hypogaea HOM05D000023 ORTHO05D002750 3.6e-09 65.9 43 60.5
Glyma.19G056600 Glycine max HOM05D000023 ORTHO05D000014 3.6e-09 65.9 176 28.4
arahy.Tifrunner.gnm1.ann1.0D33HZ Arachis hypogaea HOM05D000023 ORTHO05D002750 6.2e-09 65.1 43 60.5
arahy.Tifrunner.gnm1.ann1.T6TQZ3 Arachis hypogaea HOM05D000023 ORTHO05D002750 1.1e-08 64.3 103 42.7
Glyma.18G154600 Glycine max HOM05D000023 ORTHO05D000014 1.1e-08 64.3 203 27.1
arahy.Tifrunner.gnm1.ann1.TAI6AY Arachis hypogaea HOM05D000023 ORTHO05D000014 1.4e-08 63.9 103 41.7
arahy.Tifrunner.gnm1.ann1.7VT6FH Arachis hypogaea HOM05D000023 ORTHO05D002750 1.8e-08 63.5 143 36.4
arahy.Tifrunner.gnm1.ann1.P9DFT3 Arachis hypogaea HOM05D000023 ORTHO05D000014 1.8e-08 63.5 82 48.8
Glyma.07G133300 Glycine max HOM05D000023 ORTHO05D000014 3.1e-08 62.8 177 27.7
Lj5g0009541 Lotus japonicus HOM05D000023 ORTHO05D000014 4.0e-08 62.4 173 25.4
CANSAT80G0651 Cannabis sativa HOM05D000023 ORTHO05D000014 5.2e-08 62.0 181 29.3
Glyma.18G158000 Glycine max HOM05D000023 ORTHO05D000014 6.8e-08 61.6 196 26.5
HanXRQChr13g0409081 Helianthus annuus HOM05D000023 ORTHO05D000014 2.6e-07 59.7 172 30.2
Lj5g0000093 Lotus japonicus HOM05D000023 ORTHO05D000014 2.6e-07 59.7 180 27.2
Oeu037629.1 Olea europaea HOM05D000023 ORTHO05D000014 2.6e-07 59.7 168 29.2
Psat4g012200 Pisum sativum HOM05D000023 ORTHO05D002750 2.6e-07 59.7 71 47.9
Zm00001eb431660 Zea mays HOM05D000023 ORTHO05D000014 2.6e-07 59.7 179 27.9
arahy.Tifrunner.gnm1.ann1.5XUJ2N Arachis hypogaea HOM05D000023 ORTHO05D000014 3.4e-07 59.3 137 37.2
AUR62014098 Chenopodium quinoa HOM05D000023 ORTHO05D002750 4.4e-07 58.9 52 51.9
PGR031G0470 Punica granatum HOM05D000023 ORTHO05D000014 4.4e-07 58.9 174 28.2
TPR.G26215 Trifolium pratense HOM05D000023 ORTHO05D000014 5.8e-07 58.5 176 30.1
AUR62001032 Chenopodium quinoa HOM05D000023 ORTHO05D002750 9.8e-07 57.8 52 50.0
C01p46790 Brassica napus HOM05D000023 ORTHO05D000014 1.7e-06 57.0 37 54.1
BolC1t04652H Brassica oleracea HOM05D000023 ORTHO05D000014 1.7e-06 57.0 37 54.1
Psat5g144320 Pisum sativum HOM05D000023 ORTHO05D002750 2.2e-06 56.6 116 36.2
PGR102G1141 Punica granatum HOM05D000023 ORTHO05D000014 2.2e-06 56.6 170 32.4
GSVIVG01007419001 Vitis vinifera HOM05D000023 ORTHO05D000014 2.2e-06 56.6 170 25.3
GSVIVG01017686001 Vitis vinifera HOM05D000023 ORTHO05D000014 2.2e-06 56.6 38 57.9
arahy.Tifrunner.gnm1.ann1.NS19M2 Arachis hypogaea HOM05D000023 ORTHO05D002750 2.9e-06 56.2 158 32.3
Psat1g116440 Pisum sativum HOM05D000023 ORTHO05D002750 2.9e-06 56.2 125 33.6
THA.LOC104802620 Tarenaya hassleriana HOM05D000023 ORTHO05D000014 2.9e-06 56.2 41 53.7
GSVIVG01027351001 Vitis vinifera HOM05D000023 ORTHO05D000014 3.7e-06 55.8 199 27.1
MBI19_g32734_MAGBIO Magnolia biondii HOM05D000023 ORTHO05D000014 4.9e-06 55.5 42 47.6
Rhsim03G0000500 Rhododendron simsii HOM05D000023 ORTHO05D000014 4.9e-06 55.5 173 25.4
RcHm_v2.0_Chr7g0202011 Rosa chinensis HOM05D000023 ORTHO05D000014 4.9e-06 55.5 171 27.5
arahy.Tifrunner.gnm1.ann1.4P6X72 Arachis hypogaea HOM05D000023 ORTHO05D002750 6.4e-06 55.1 162 27.2
arahy.Tifrunner.gnm1.ann1.Q0VZPJ Arachis hypogaea HOM05D000023 ORTHO05D002750 6.4e-06 55.1 115 31.3
EL10Ac2g02966 Beta vulgaris HOM05D000023 ORTHO05D002750 6.4e-06 55.1 40 52.5
Cc08_g13130 Coffea canephora HOM05D000023 ORTHO05D000014 6.4e-06 55.1 170 24.1
FvH4_5g00491 Fragaria vesca HOM05D000023 ORTHO05D000014 6.4e-06 55.1 171 26.3
Phvul.006G005600 Phaseolus vulgaris HOM05D000023 ORTHO05D002750 6.4e-06 55.1 67 44.8
Phvul.007G178500 Phaseolus vulgaris HOM05D000023 ORTHO05D012474 6.4e-06 55.1 97 40.2
TWI09G0737 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 6.4e-06 55.1 37 56.8
AL3G30530 Arabidopsis lyrata HOM05D000023 ORTHO05D000014 8.3e-06 54.7 37 54.1
AT3G17450 Arabidopsis thaliana HOM05D000023 ORTHO05D000014 8.3e-06 54.7 37 54.1
CARHR092770 Cardamine hirsuta HOM05D000023 ORTHO05D000014 8.3e-06 54.7 37 54.1
Thhalv10020031m.g Eutrema salsugineum HOM05D000023 ORTHO05D000014 8.3e-06 54.7 37 54.1
Prupe.1G105600 Prunus persica HOM05D000023 ORTHO05D000014 8.3e-06 54.7 39 53.8
RcHm_v2.0_Chr4g0427461 Rosa chinensis HOM05D000023 ORTHO05D000014 8.3e-06 54.7 39 53.8


User provided reference genes

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