Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.BC78PS Arachis hypogaea HOM05D007278 ORTHO05D009280 9.4e-166 587.0 350 100.0
arahy.Tifrunner.gnm1.ann1.E9ZV4R Arachis hypogaea HOM05D007278 ORTHO05D009280 1.2e-160 570.1 350 97.7
Lj6g0007693 Lotus japonicus HOM05D007278 ORTHO05D009280 6.6e-87 325.1 334 57.8
Glyma.18G074900 Glycine max HOM05D007278 ORTHO05D009280 4.9e-82 308.9 323 56.7
Phvul.006G059206 Phaseolus vulgaris HOM05D007278 ORTHO05D009280 3.9e-79 299.3 333 53.2
Ca_12446_v3 Cicer arietinum L. HOM05D007278 ORTHO05D009280 8.7e-79 298.1 347 51.6
VMungo0540G0529 Vigna mungo HOM05D007278 ORTHO05D009280 8.7e-79 298.1 339 51.3
Lalb_Chr20g0114071 Lupinus albus HOM05D007278 ORTHO05D009280 3.7e-77 292.7 334 52.7
TPR.G17958 Trifolium pratense HOM05D007278 ORTHO05D009280 1.7e-74 283.9 350 50.9
QL08p003254 Quercus lobata HOM05D007278 ORTHO05D009280 2.5e-65 253.4 347 45.5
Cfa016926 Carpinus fangiana HOM05D007278 ORTHO05D009280 3.2e-65 253.1 367 44.4
Ca_14732_v3 Cicer arietinum L. HOM05D007278 ORTHO05D009280 1.3e-63 247.7 262 53.4
CiPaw.11G206100 Carya illinoinensis HOM05D007278 ORTHO05D009280 8.7e-63 245.0 344 44.8
Prupe.6G026900 Prunus persica HOM05D007278 ORTHO05D009280 2.5e-62 243.4 323 45.5
Ciclev10010817m.g Citrus clementina HOM05D007278 ORTHO05D009280 5.7e-62 242.3 331 44.1
Haze_09857 Corylus avellana HOM05D007278 ORTHO05D009280 6.3e-61 238.8 349 43.3
GSVIVG01014732001 Vitis vinifera HOM05D007278 ORTHO05D009280 6.3e-61 238.8 345 43.8
Sabra16G0243500 Salix brachista HOM05D007278 ORTHO05D009280 1.2e-59 234.6 285 48.1
MD11G1036100 Malus domestica HOM05D007278 ORTHO05D009280 5.9e-59 232.3 283 45.6
Gohir.D13G134500 Gossypium hirsutum HOM05D007278 ORTHO05D009280 1.0e-58 231.5 343 42.6
Atru.chr2.3762 Acer truncatum HOM05D007278 ORTHO05D009280 1.3e-58 231.1 351 41.3
Gohir.A13G131200 Gossypium hirsutum HOM05D007278 ORTHO05D009280 1.3e-58 231.1 284 46.8
Dinv10356 Davidia involucrata HOM05D007278 ORTHO05D009280 1.7e-58 230.7 349 43.3
Gorai.013G150800 Gossypium raimondii HOM05D007278 ORTHO05D009280 2.9e-58 229.9 343 42.0
Potri.001G370700 Populus trichocarpa HOM05D007278 ORTHO05D009280 6.5e-58 228.8 322 44.4
TAR626G0410 Trochodendron aralioides HOM05D007278 ORTHO05D009280 8.5e-58 228.4 290 46.2
TWI38G0395 Tripterygium wilfordii HOM05D007278 ORTHO05D009280 9.4e-57 224.9 292 43.8
Cpa.g.sc12.134 Carica papaya HOM05D007278 ORTHO05D009280 2.1e-56 223.8 301 45.2
Duzib213G0397 Durio zibethinus HOM05D007278 ORTHO05D009280 6.1e-56 222.2 342 41.8
Atru.chr2.3748 Acer truncatum HOM05D007278 ORTHO05D009280 7.9e-56 221.9 351 40.5
FAN21G2048 Fragaria x ananassa HOM05D007278 ORTHO05D009280 1.4e-55 221.1 287 43.9
FvH4_3g42411 Fragaria vesca HOM05D007278 ORTHO05D009280 3.0e-55 219.9 287 43.6
Lj8A180T100 Lonicera japonica HOM05D007278 ORTHO05D009280 3.9e-55 219.5 290 44.1
Actinidia03626 Actinidia chinensis HOM05D007278 ORTHO05D009280 6.7e-55 218.8 353 39.7
MD03G1032400 Malus domestica HOM05D007278 ORTHO05D009280 6.7e-55 218.8 273 46.9
RcHm_v2.0_Chr5g0075911 Rosa chinensis HOM05D007278 ORTHO05D009280 8.8e-55 218.4 287 48.8
Thecc.07G008600 Theobroma cacao HOM05D007278 ORTHO05D009280 8.8e-55 218.4 320 42.8
Psat5g165280 Pisum sativum HOM05D007278 ORTHO05D009280 2.0e-54 217.2 247 53.4
Eucgr.F03677 Eucalyptus grandis HOM05D007278 ORTHO05D009280 2.5e-54 216.9 279 53.4
FAN11G3173 Fragaria x ananassa HOM05D007278 ORTHO05D009280 3.3e-54 216.5 287 42.9
Nn7g37466 Nelumbo nucifera HOM05D007278 ORTHO05D009280 4.3e-54 216.1 283 42.8
FAN28G1934 Fragaria x ananassa HOM05D007278 ORTHO05D009280 2.2e-53 213.8 287 42.5
Hma1.2p1_1094F.1_g256380 Hydrangea macrophylla HOM05D007278 ORTHO05D009280 3.7e-53 213.0 319 43.6
CsaV3_3G004120 Cucumis sativus L. HOM05D007278 ORTHO05D009280 6.3e-53 212.2 333 40.2
PGR031G2600 Punica granatum HOM05D007278 ORTHO05D009280 8.2e-53 211.8 334 39.5
CANSAT11G0150 Cannabis sativa HOM05D007278 ORTHO05D009280 1.8e-52 210.7 266 52.3
MELO3C014108.2 Cucumis melo HOM05D007278 ORTHO05D009280 3.1e-52 209.9 316 40.5
ClCG10G004340 Citrullus lanatus HOM05D007278 ORTHO05D009280 5.3e-52 209.1 337 39.2
FAN16G1801 Fragaria x ananassa HOM05D007278 ORTHO05D009280 1.5e-51 207.6 275 42.9
COL.COLO4_07734 Corchorus olitorius HOM05D007278 ORTHO05D009280 5.9e-51 205.7 254 46.5
Rhsim04G0010900 Rhododendron simsii HOM05D007278 ORTHO05D009280 1.0e-50 204.9 361 38.0
Sed0005179 Sechium edule HOM05D007278 ORTHO05D009280 1.0e-50 204.9 268 42.9
vmacro09628 Vaccinium macrocarpon HOM05D007278 ORTHO05D009280 5.0e-50 202.6 281 45.2
CSS0042987 Camellia sinensis var. sinensis HOM05D007278 ORTHO05D009280 7.2e-49 198.7 342 36.8
Oeu005473.1 Olea europaea HOM05D007278 ORTHO05D009280 7.2e-49 198.7 310 46.5
Aa31LG10G360 Aethionema arabicum HOM05D007278 ORTHO05D009280 5.1e-47 192.6 341 38.1
CAN.G623.31 Capsicum annuum HOM05D007278 ORTHO05D009280 1.1e-46 191.4 343 35.6
SalBow8G0318 Salvia bowleyana HOM05D007278 ORTHO05D009280 2.6e-46 190.3 261 44.1
SalBow8G0571 Salvia bowleyana HOM05D007278 ORTHO05D009280 2.6e-46 190.3 261 44.1
THA.LOC104822724 Tarenaya hassleriana HOM05D007278 ORTHO05D009280 2.6e-46 190.3 288 39.9
PSO210G1309 Papaver somniferum HOM05D007278 ORTHO05D009280 7.4e-46 188.7 273 42.1
Peaxi162Scf00139g00103 Petunia axillaris HOM05D007278 ORTHO05D009280 6.3e-45 185.7 343 35.0
Solyc07g065760.3 Solanum lycopersicum HOM05D007278 ORTHO05D009280 6.3e-45 185.7 283 38.9
Sopen07g033970 Solanum pennellii HOM05D007278 ORTHO05D009280 8.2e-45 185.3 283 38.9
PGSC0003DMG400022161 Solanum tuberosum HOM05D007278 ORTHO05D009280 2.4e-44 183.7 283 38.2
Nitab4.5_0000152g0330 Nicotiana tabacum HOM05D007278 ORTHO05D009280 4.1e-44 183.0 288 38.5
Nitab4.5_0010643g0030 Nicotiana tabacum HOM05D007278 ORTHO05D009280 5.3e-44 182.6 288 37.8
Migut.M01628 Erythranthe guttata HOM05D007278 ORTHO05D009280 2.0e-43 180.6 384 33.6
AL1G63950 Arabidopsis lyrata HOM05D007278 ORTHO05D009280 5.9e-43 179.1 335 37.9
EL10Ac4g07533 Beta vulgaris HOM05D007278 ORTHO05D009280 5.9e-43 179.1 273 39.9
HanXRQChr11g0334411 Helianthus annuus HOM05D007278 ORTHO05D009280 1.0e-42 178.3 318 33.3
BcaB07g33186 Brassica carinata HOM05D007278 ORTHO05D009280 2.9e-42 176.8 340 36.2
AUR62035670 Chenopodium quinoa HOM05D007278 ORTHO05D009280 2.9e-42 176.8 266 41.7
Lsat_1_v5_gn_7_114160 Lactuca sativa HOM05D007278 ORTHO05D009280 2.9e-42 176.8 260 41.5
AUR62017137 Chenopodium quinoa HOM05D007278 ORTHO05D009280 5.0e-42 176.0 266 41.4
Cc05_g15160 Coffea canephora HOM05D007278 ORTHO05D009280 6.5e-42 175.6 316 38.0
AT1G55830 Arabidopsis thaliana HOM05D007278 ORTHO05D009280 8.5e-42 175.3 332 35.8
Carub.0001s4440 Capsella rubella HOM05D007278 ORTHO05D009280 9.4e-41 171.8 280 38.6
Sp1g41410 Schrenkiella parvula HOM05D007278 ORTHO05D009280 9.4e-41 171.8 305 37.4
BcaC08g43656 Brassica carinata HOM05D007278 ORTHO05D009280 1.4e-39 167.9 283 38.2
C06p10730 Brassica napus HOM05D007278 ORTHO05D009280 1.4e-39 167.9 283 38.2
CARHR045530 Cardamine hirsuta HOM05D007278 ORTHO05D009280 1.4e-39 167.9 347 35.2
BolC6t36159H Brassica oleracea HOM05D007278 ORTHO05D009280 8.8e-39 165.2 271 38.7
Manes.15G057600 Manihot esculenta HOM05D007278 ORTHO05D009280 1.1e-38 164.9 196 49.0
Thhalv10011545m.g Eutrema salsugineum HOM05D007278 ORTHO05D009280 1.5e-38 164.5 310 35.5
Hund23054 Selenicereus undatus HOM05D007278 ORTHO05D000105 2.0e-38 164.1 359 33.7
SEGI_11808 Sequoiadendron giganteum HOM05D007278 ORTHO05D009280 1.7e-37 161.0 290 34.5
BraSC56t46403Z Brassica rapa HOM05D007278 ORTHO05D009280 1.6e-35 154.5 285 36.8
Aqoxy1G02222 Aquilegia oxysepala HOM05D007278 ORTHO05D009280 4.5e-35 152.9 289 33.2
MD03G1032000 Malus domestica HOM05D007278 ORTHO05D009280 4.5e-35 152.9 140 60.0
ECA236G2022 Erigeron canadensis HOM05D007278 ORTHO05D009280 5.0e-34 149.4 303 38.6
ATR0751G235 Amborella trichopoda HOM05D007278 ORTHO05D009280 1.5e-33 147.9 298 31.5
CDE10G0141 Ceratophyllum demersum HOM05D007278 ORTHO05D009280 1.1e-25 121.7 295 31.5
Mapoly0076s0093 Marchantia polymorpha HOM05D007278 ORTHO05D009280 1.1e-25 121.7 256 30.5
AagrBONN_evm.TU.Sc2ySwM_344.4166 Anthoceros agrestis HOM05D007278 ORTHO05D009280 2.0e-22 110.9 282 29.1
Pp3c7_290 Physcomitrium patens HOM05D007278 ORTHO05D009280 3.7e-21 106.7 324 26.2
Hma1.2p1_0604F.1_g187790 Hydrangea macrophylla HOM05D007278 ORTHO05D009280 1.4e-12 78.2 77 51.9
HPP92_028502 Vanilla planifolia HOM05D007278 ORTHO05D009280 2.7e-11 73.9 192 26.0
Hma1.2p1_0292F.1_g115510 Hydrangea macrophylla HOM05D007278 ORTHO05D009280 1.7e-10 71.2 66 50.0
BraA06t23216Z Brassica rapa HOM05D007278 ORTHO05D009280 1.1e-09 68.6 88 46.6


User provided reference genes

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