Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.B9KQZT Arachis hypogaea HOM05D057642 ORTHO05D012132 1.2e-94 349.7 171 100.0
arahy.Tifrunner.gnm1.ann1.M2WR10 Arachis hypogaea HOM05D057642 ORTHO05D012132 1.2e-94 349.7 171 100.0
arahy.Tifrunner.gnm1.ann1.NZL2UA Arachis hypogaea HOM05D000340 ORTHO05D000821 3.3e-23 112.5 62 91.9
arahy.Tifrunner.gnm1.ann1.XX5QBN Arachis hypogaea HOM05D000340 ORTHO05D000821 3.3e-23 112.5 62 91.9
Phvul.008G255800 Phaseolus vulgaris HOM05D000340 ORTHO05D000821 1.6e-17 93.6 62 79.0
Glyma.08G222800 Glycine max HOM05D000340 ORTHO05D000821 1.0e-16 90.9 62 79.0
Glyma.07G003800 Glycine max HOM05D000340 ORTHO05D000821 3.9e-16 89.0 62 77.4
VMungo0647G1907 Vigna mungo HOM05D000340 ORTHO05D000821 1.9e-15 86.7 62 75.8
QL05p083249 Quercus lobata HOM05D000340 ORTHO05D000821 2.5e-15 86.3 62 69.4
Ca_20953_v3 Cicer arietinum L. HOM05D000340 ORTHO05D000821 7.4e-15 84.7 62 74.2
Lj3g0021505 Lotus japonicus HOM05D000340 ORTHO05D000821 9.6e-15 84.3 62 72.6
CSS0042822 Camellia sinensis var. sinensis HOM05D000340 ORTHO05D000821 2.1e-14 83.2 62 69.4
Dinv20357 Davidia involucrata HOM05D000340 ORTHO05D000821 2.1e-14 83.2 62 69.4
FvH4_6g37310 Fragaria vesca HOM05D000340 ORTHO05D000821 2.1e-14 83.2 63 69.8
FAN05G2591 Fragaria x ananassa HOM05D000340 ORTHO05D000821 2.1e-14 83.2 63 69.8
FAN09G4574 Fragaria x ananassa HOM05D000340 ORTHO05D000821 2.1e-14 83.2 63 69.8
FAN14G0043 Fragaria x ananassa HOM05D000340 ORTHO05D000821 2.1e-14 83.2 63 69.8
Medtr4g006010 Medicago truncatula HOM05D000340 ORTHO05D000821 2.8e-14 82.8 62 75.8
Psat7g263600 Pisum sativum HOM05D000340 ORTHO05D000821 3.7e-14 82.4 62 72.6
vmacro17062 Vaccinium macrocarpon HOM05D000340 ORTHO05D000821 4.8e-14 82.0 62 69.4
Rhsim12G0214200 Rhododendron simsii HOM05D000340 ORTHO05D000821 8.2e-14 81.3 62 67.7
TPR.G25624 Trifolium pratense HOM05D000340 ORTHO05D000821 8.2e-14 81.3 62 72.6
RcHm_v2.0_Chr2g0150131 Rosa chinensis HOM05D000340 ORTHO05D000821 2.4e-13 79.7 63 68.3
Prupe.3G167200 Prunus persica HOM05D000340 ORTHO05D000821 4.1e-13 79.0 62 66.1
arahy.Tifrunner.gnm1.ann1.5UIV2K Arachis hypogaea HOM05D000340 ORTHO05D012132 5.3e-13 78.6 42 88.1
arahy.Tifrunner.gnm1.ann1.Z7YW29 Arachis hypogaea HOM05D000340 ORTHO05D012132 5.3e-13 78.6 42 88.1
FAN02G3491 Fragaria x ananassa HOM05D000340 ORTHO05D000821 5.3e-13 78.6 63 66.7
Hma1.2p1_1104F.1_g257370 Hydrangea macrophylla HOM05D000340 ORTHO05D000821 1.5e-12 77.0 63 69.8
Nn2g12599 Nelumbo nucifera HOM05D000340 ORTHO05D000821 2.6e-12 76.3 62 64.5
Aqoxy7G03191 Aquilegia oxysepala HOM05D000340 ORTHO05D000821 5.8e-12 75.1 62 61.3
EL10Ac7g18227 Beta vulgaris HOM05D000340 ORTHO05D000821 1.0e-11 74.3 62 62.9
MD09G1158600 Malus domestica HOM05D000340 ORTHO05D000821 1.3e-11 73.9 63 63.5
Ah.15g094700 Amaranthus hybridus HOM05D000340 ORTHO05D000821 1.7e-11 73.6 62 66.1
Actinidia00636 Actinidia chinensis HOM05D000340 ORTHO05D000821 3.8e-11 72.4 63 63.5
Lsat_1_v5_gn_4_88681 Lactuca sativa HOM05D000340 ORTHO05D000821 5.0e-11 72.0 63 68.3
MD17G1144800 Malus domestica HOM05D000340 ORTHO05D000821 5.0e-11 72.0 63 61.9
PSO063G0184 Papaver somniferum HOM05D000340 ORTHO05D000821 5.0e-11 72.0 69 55.1
Actinidia31137 Actinidia chinensis HOM05D000340 ORTHO05D000821 6.5e-11 71.6 63 63.5
AUR62001370 Chenopodium quinoa HOM05D000340 ORTHO05D000821 8.4e-11 71.2 62 59.7
AUR62025586 Chenopodium quinoa HOM05D000340 ORTHO05D000821 8.4e-11 71.2 62 59.7
Cfa013293 Carpinus fangiana HOM05D000340 ORTHO05D000821 1.1e-10 70.9 62 59.7
CiPaw.07G210900 Carya illinoinensis HOM05D000340 ORTHO05D000821 1.1e-10 70.9 62 59.7
Medtr3g109040 Medicago truncatula HOM05D000340 ORTHO05D000821 1.1e-10 70.9 74 55.4
Prupe.1G457800 Prunus persica HOM05D000340 ORTHO05D000821 1.4e-10 70.5 62 59.7
Psat5g025120 Pisum sativum HOM05D000340 ORTHO05D000821 1.9e-10 70.1 62 58.1
Haze_21774 Corylus avellana HOM05D000340 ORTHO05D000821 3.2e-10 69.3 62 58.1
Eucgr.C02007 Eucalyptus grandis HOM05D000340 ORTHO05D000821 3.2e-10 69.3 62 58.1
Ca_15646_v3 Cicer arietinum L. HOM05D000340 ORTHO05D000821 5.5e-10 68.6 62 58.1
Ca_15648_v3 Cicer arietinum L. HOM05D000340 ORTHO05D000821 5.5e-10 68.6 62 58.1
Dinv37797 Davidia involucrata HOM05D000340 ORTHO05D000821 5.5e-10 68.6 62 61.3
Hund18616 Selenicereus undatus HOM05D000340 ORTHO05D000821 5.5e-10 68.6 64 62.5
Duzib187G0909 Durio zibethinus HOM05D000340 ORTHO05D000821 1.6e-09 67.0 62 56.5
Hund05686 Selenicereus undatus HOM05D000340 ORTHO05D000821 2.1e-09 66.6 62 59.7
MBI15_g26080_MAGBIO Magnolia biondii HOM05D000340 ORTHO05D000821 2.7e-09 66.2 62 54.8
TAR383G0929 Trochodendron aralioides HOM05D000340 ORTHO05D000821 2.7e-09 66.2 62 54.8
QL12p025605 Quercus lobata HOM05D000340 ORTHO05D000821 4.6e-09 65.5 62 53.2
Lalb_Chr23g0269191 Lupinus albus HOM05D000340 ORTHO05D000821 6.1e-09 65.1 63 58.7
Thecc.09G009300 Theobroma cacao HOM05D000340 ORTHO05D000821 6.1e-09 65.1 62 56.5
TPR.G12336 Trifolium pratense HOM05D000340 ORTHO05D000821 6.1e-09 65.1 62 56.5
CANSAT01G1318 Cannabis sativa HOM05D000340 ORTHO05D000821 7.9e-09 64.7 64 60.9
Gohir.A07G034760 Gossypium hirsutum HOM05D000340 ORTHO05D000821 7.9e-09 64.7 62 53.2
arahy.Tifrunner.gnm1.ann1.BXY830 Arachis hypogaea HOM05D000340 ORTHO05D000821 1.0e-08 64.3 62 54.8
COL.COLO4_19014 Corchorus olitorius HOM05D000340 ORTHO05D000821 1.3e-08 63.9 62 54.8
MD08G1126200 Malus domestica HOM05D000340 ORTHO05D000821 1.3e-08 63.9 62 56.5
CiPaw.08G020900 Carya illinoinensis HOM05D000340 ORTHO05D000821 1.8e-08 63.5 62 56.5
arahy.Tifrunner.gnm1.ann1.Q468GD Arachis hypogaea HOM05D000340 ORTHO05D000821 2.3e-08 63.2 62 54.8
CDE04G2399 Ceratophyllum demersum HOM05D000340 ORTHO05D000821 2.3e-08 63.2 63 55.6
Sed0021461 Sechium edule HOM05D000340 ORTHO05D000821 3.0e-08 62.8 62 54.8
CDE02G4650 Ceratophyllum demersum HOM05D000340 ORTHO05D000821 5.1e-08 62.0 63 55.6
Lj1g0024875 Lotus japonicus HOM05D000340 ORTHO05D000821 5.1e-08 62.0 62 56.5
Cc08_g06540 Coffea canephora HOM05D000340 ORTHO05D000821 6.7e-08 61.6 62 54.8
RcHm_v2.0_Chr6g0305191 Rosa chinensis HOM05D000340 ORTHO05D000821 6.7e-08 61.6 62 53.2
TAR266G0001 Trochodendron aralioides HOM05D000340 ORTHO05D000821 6.7e-08 61.6 63 50.8
VMungo1309G0104 Vigna mungo HOM05D000340 ORTHO05D000821 6.7e-08 61.6 62 56.5
Dinv08685 Davidia involucrata HOM05D000340 ORTHO05D000821 8.7e-08 61.2 62 54.8
Gohir.D07G038500 Gossypium hirsutum HOM05D000340 ORTHO05D000821 8.7e-08 61.2 62 50.0
Gorai.001G040500 Gossypium raimondii HOM05D000340 ORTHO05D000821 8.7e-08 61.2 62 50.0
MBI14_g30705_MAGBIO Magnolia biondii HOM05D000340 ORTHO05D000821 8.7e-08 61.2 62 54.8
Phvul.009G102200 Phaseolus vulgaris HOM05D000340 ORTHO05D000821 8.7e-08 61.2 62 54.8
ATR0580G249 Amborella trichopoda HOM05D000340 ORTHO05D000821 1.1e-07 60.8 62 50.0
CsaV3_3G047200 Cucumis sativus L. HOM05D000340 ORTHO05D000821 1.5e-07 60.5 62 51.6
Solyc08g006310.3 Solanum lycopersicum HOM05D000340 ORTHO05D000821 1.5e-07 60.5 62 51.6
Duzib168G2030 Durio zibethinus HOM05D000340 ORTHO05D000821 1.9e-07 60.1 62 53.2
FAN15G1548 Fragaria x ananassa HOM05D000340 ORTHO05D000821 1.9e-07 60.1 62 54.8
Manes.03G005200 Manihot esculenta HOM05D000340 ORTHO05D000821 1.9e-07 60.1 62 53.2
SEGI_02551 Sequoiadendron giganteum HOM05D000340 ORTHO05D000821 1.9e-07 60.1 62 54.8
Glyma.04G076500 Glycine max HOM05D000340 ORTHO05D000821 2.5e-07 59.7 62 56.5
Sabra18G0012800 Salix brachista HOM05D000340 ORTHO05D000821 2.5e-07 59.7 62 53.2
Sabra18G0016100 Salix brachista HOM05D000340 ORTHO05D000821 2.5e-07 59.7 62 53.2
Glyma.17G196700 Glycine max HOM05D000340 ORTHO05D000821 3.3e-07 59.3 63 57.1
MELO3C003616.2 Cucumis melo HOM05D000340 ORTHO05D000821 4.3e-07 58.9 62 51.6
Glyma.06G077700 Glycine max HOM05D000340 ORTHO05D000821 4.3e-07 58.9 62 56.5
Glyma.14G136900 Glycine max HOM05D000340 ORTHO05D000821 7.4e-07 58.2 63 57.1
Gohir.D05G065700 Gossypium hirsutum HOM05D000340 ORTHO05D000821 7.4e-07 58.2 62 51.6
Gorai.009G066500 Gossypium raimondii HOM05D000340 ORTHO05D000821 7.4e-07 58.2 62 51.6
ATR0736G149 Amborella trichopoda HOM05D000340 ORTHO05D012132 9.7e-07 57.8 63 50.8
Potri.018G009300 Populus trichocarpa HOM05D000340 ORTHO05D000821 9.7e-07 57.8 62 54.8
CAN.G137.61 Capsicum annuum HOM05D000340 ORTHO05D000821 1.3e-06 57.4 62 50.0
ClCG05G026400 Citrullus lanatus HOM05D000340 ORTHO05D000821 1.3e-06 57.4 62 51.6
Peaxi162Scf00045g01645 Petunia axillaris HOM05D000340 ORTHO05D000821 1.3e-06 57.4 62 46.8
Potri.006G270900 Populus trichocarpa HOM05D000340 ORTHO05D000821 1.3e-06 57.4 62 51.6
PGSC0003DMG400009536 Solanum tuberosum HOM05D000340 ORTHO05D000821 1.3e-06 57.4 62 50.0
Gohir.A05G063100 Gossypium hirsutum HOM05D000340 ORTHO05D000821 1.6e-06 57.0 62 51.6
Lj7C747T9 Lonicera japonica HOM05D000340 ORTHO05D000821 1.6e-06 57.0 62 45.2
MSTRG.25797 Avicennia marina HOM05D000340 ORTHO05D000821 2.2e-06 56.6 62 48.4
Gohir.A06G104500 Gossypium hirsutum HOM05D000340 ORTHO05D000821 2.2e-06 56.6 62 50.0
Sabra06G0210500 Salix brachista HOM05D000340 ORTHO05D000821 2.2e-06 56.6 62 50.0
Sopen08g002290 Solanum pennellii HOM05D000340 ORTHO05D000821 2.2e-06 56.6 62 50.0
BcaC09g51939 Brassica carinata HOM05D000340 ORTHO05D000821 3.7e-06 55.8 62 51.6
A01p06660 Brassica napus HOM05D000340 ORTHO05D000821 3.7e-06 55.8 62 50.0
BolC1t00724H Brassica oleracea HOM05D000340 ORTHO05D000821 3.7e-06 55.8 62 51.6
BraA01t00624Z Brassica rapa HOM05D000340 ORTHO05D000821 3.7e-06 55.8 62 50.0
Gohir.D06G106600 Gossypium hirsutum HOM05D000340 ORTHO05D000821 6.3e-06 55.1 62 46.8
C01p07420 Brassica napus HOM05D000340 ORTHO05D000821 8.2e-06 54.7 62 50.0


User provided reference genes

Program Settings