Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.B9ILCP Arachis hypogaea HOM05D007229 ORTHO05D009131 6.9e-93 344.0 175 100.0
arahy.Tifrunner.gnm1.ann1.I1HNZH Arachis hypogaea HOM05D007229 ORTHO05D009131 1.1e-90 336.7 175 97.7
Glyma.04G221700 Glycine max HOM05D007229 ORTHO05D009131 1.0e-72 276.9 173 81.5
VMungo1309G1820 Vigna mungo HOM05D007229 ORTHO05D009131 6.7e-72 274.2 173 81.5
Glyma.06G143700 Glycine max HOM05D007229 ORTHO05D009131 8.2e-70 267.3 174 80.5
Lj1g0022940 Lotus japonicus HOM05D007229 ORTHO05D009131 2.4e-69 265.8 174 82.2
Phvul.009G142501 Phaseolus vulgaris HOM05D007229 ORTHO05D009131 2.4e-69 265.8 173 78.6
Lalb_Chr11g0067841 Lupinus albus HOM05D007229 ORTHO05D009131 2.0e-68 262.7 173 80.3
Medtr3g094080 Medicago truncatula HOM05D007229 ORTHO05D009131 2.1e-65 252.7 174 75.3
Psat5g069080 Pisum sativum HOM05D007229 ORTHO05D009131 6.7e-64 247.7 177 72.9
Prupe.2G263300 Prunus persica HOM05D007229 ORTHO05D009131 8.8e-64 247.3 177 75.1
TPR.G16113 Trifolium pratense HOM05D007229 ORTHO05D009131 2.0e-63 246.1 179 74.9
Haze_17350 Corylus avellana HOM05D000154 ORTHO05D000092 4.4e-63 245.0 176 73.9
Hma1.2p1_2086F.1_g313730 Hydrangea macrophylla HOM05D007229 ORTHO05D009131 5.7e-63 244.6 177 72.3
Ciclev10033477m.g Citrus clementina HOM05D007229 ORTHO05D009131 1.7e-62 243.0 173 71.1
GSVIVG01032702001 Vitis vinifera HOM05D007229 ORTHO05D009131 1.7e-62 243.0 175 72.6
FvH4_7g25840 Fragaria vesca HOM05D007229 ORTHO05D009131 1.1e-61 240.4 177 73.4
FAN06G3440 Fragaria x ananassa HOM05D007229 ORTHO05D009131 1.1e-61 240.4 177 73.4
QL08p064765 Quercus lobata HOM05D007229 ORTHO05D009131 1.1e-61 240.4 177 72.3
Manes.07G139500 Manihot esculenta HOM05D007229 ORTHO05D009131 7.0e-61 237.7 176 72.7
RcHm_v2.0_Chr1g0372111 Rosa chinensis HOM05D007229 ORTHO05D009131 2.6e-60 235.7 177 72.9
COL.COLO4_19452 Corchorus olitorius HOM05D007229 ORTHO05D009131 3.5e-60 235.3 177 70.1
Duzib114G0482 Durio zibethinus HOM05D007229 ORTHO05D009131 3.5e-60 235.3 177 72.3
MD07G1232800 Malus domestica HOM05D007229 ORTHO05D009131 4.5e-60 235.0 174 71.3
Thecc.10G183800 Theobroma cacao HOM05D007229 ORTHO05D009131 4.5e-60 235.0 176 72.7
Manes.10G004800 Manihot esculenta HOM05D007229 ORTHO05D009131 1.3e-59 233.4 179 70.9
Gohir.A05G403900 Gossypium hirsutum HOM05D007229 ORTHO05D009131 2.9e-59 232.3 179 70.9
Gohir.D04G011900 Gossypium hirsutum HOM05D007229 ORTHO05D009131 3.8e-59 231.9 179 70.9
Gorai.012G014100 Gossypium raimondii HOM05D007229 ORTHO05D009131 3.8e-59 231.9 179 70.9
Cc02_g05510 Coffea canephora HOM05D007229 ORTHO05D009131 2.5e-58 229.2 179 69.3
TWI53G0143 Tripterygium wilfordii HOM05D007229 ORTHO05D009131 2.5e-58 229.2 175 69.7
PGSC0003DMG400024310 Solanum tuberosum HOM05D007229 ORTHO05D009131 5.5e-58 228.0 178 67.4
Oeu020108.1 Olea europaea HOM05D007229 ORTHO05D009131 2.1e-57 226.1 182 68.1
PGR044G2361 Punica granatum HOM05D007229 ORTHO05D009131 2.1e-57 226.1 179 69.3
Potri.019G056400 Populus trichocarpa HOM05D007229 ORTHO05D009131 2.7e-57 225.7 176 68.2
Rhsim09G0184500 Rhododendron simsii HOM05D007229 ORTHO05D009131 2.7e-57 225.7 178 68.5
TAR369G0442 Trochodendron aralioides HOM05D007229 ORTHO05D009131 2.7e-57 225.7 176 68.2
Dinv26059 Davidia involucrata HOM05D007229 ORTHO05D009131 3.6e-57 225.3 178 67.4
Lsat_1_v5_gn_8_13541 Lactuca sativa HOM05D007229 ORTHO05D009131 4.7e-57 224.9 181 66.9
Sopen06g015630 Solanum pennellii HOM05D007229 ORTHO05D009131 1.8e-56 223.0 180 65.6
Hund13463 Selenicereus undatus HOM05D007229 ORTHO05D009131 4.0e-56 221.9 183 67.2
Lj1A965T45 Lonicera japonica HOM05D007229 ORTHO05D009131 6.8e-56 221.1 183 65.0
Solyc06g050170.4 Solanum lycopersicum HOM05D000154 ORTHO05D000092 1.5e-55 219.9 183 63.4
ECA233G6234 Erigeron canadensis HOM05D007229 ORTHO05D009131 2.6e-55 219.2 180 64.4
Peaxi162Scf00739g00125 Petunia axillaris HOM05D000154 ORTHO05D000092 2.6e-55 219.2 180 66.7
Sabra19G0072100 Salix brachista HOM05D007229 ORTHO05D009131 2.6e-55 219.2 177 67.8
Cpa.g.sc19.82 Carica papaya HOM05D007229 ORTHO05D009131 4.4e-55 218.4 141 78.7
CiPaw.01G306000 Carya illinoinensis HOM05D007229 ORTHO05D009131 7.5e-55 217.6 180 65.0
HanXRQChr08g0222581 Helianthus annuus HOM05D007229 ORTHO05D009131 7.5e-55 217.6 183 65.0
PSO339G1638 Papaver somniferum HOM05D007229 ORTHO05D009131 1.3e-54 216.9 147 78.2
Sc14g0005610 Simmondsia chinensis HOM05D007229 ORTHO05D009131 1.3e-54 216.9 174 69.0
PSO384G2154 Papaver somniferum HOM05D007229 ORTHO05D009131 3.7e-54 215.3 129 82.9
MBI15_g35108_MAGBIO Magnolia biondii HOM05D007229 ORTHO05D009131 6.3e-54 214.5 172 66.9
CDE12G0285 Ceratophyllum demersum HOM05D007229 ORTHO05D009131 8.3e-54 214.2 148 73.6
Duzib106G0259 Durio zibethinus HOM05D007229 ORTHO05D009131 1.1e-53 213.8 137 80.3
Actinidia00993 Actinidia chinensis HOM05D007229 ORTHO05D009131 1.4e-53 213.4 178 64.0
MSTRG.27273 Avicennia marina HOM05D007229 ORTHO05D009131 1.4e-53 213.4 169 68.6
SalBow3G2298 Salvia bowleyana HOM05D007229 ORTHO05D009131 3.1e-53 212.2 170 66.5
CAN.G55.3 Capsicum annuum HOM05D007229 ORTHO05D009131 5.4e-53 211.5 118 84.7
EL10Ac2g04250 Beta vulgaris HOM05D007229 ORTHO05D009131 1.2e-52 210.3 199 61.3
AT3G56290 Arabidopsis thaliana HOM05D007229 ORTHO05D009131 2.7e-52 209.1 177 64.4
Migut.F00594 Erythranthe guttata HOM05D007229 ORTHO05D009131 5.9e-52 208.0 119 82.4
SGA_v2.0_scaffold60G20901 Striga asiatica HOM05D007229 ORTHO05D009131 1.0e-51 207.2 137 77.4
CSS0032880 Camellia sinensis var. sinensis HOM05D007229 ORTHO05D009131 2.2e-51 206.1 179 62.0
MELO3C020131.2 Cucumis melo HOM05D007229 ORTHO05D009131 2.2e-51 206.1 168 63.1
DCAR_019811 Daucus carota HOM05D007229 ORTHO05D009131 2.2e-51 206.1 123 82.1
C06p23470 Brassica napus HOM05D007229 ORTHO05D009131 2.9e-51 205.7 177 63.8
BcaC08g44777 Brassica carinata HOM05D007229 ORTHO05D009131 3.8e-51 205.3 177 63.8
A07p22880 Brassica napus HOM05D007229 ORTHO05D009131 3.8e-51 205.3 177 63.8
BraA07t29954Z Brassica rapa HOM05D007229 ORTHO05D009131 3.8e-51 205.3 177 63.8
CARHR166450 Cardamine hirsuta HOM05D007229 ORTHO05D009131 3.8e-51 205.3 177 63.8
BolC6t37520H Brassica oleracea HOM05D007229 ORTHO05D009131 5.0e-51 204.9 177 63.8
CsaV3_5G010830 Cucumis sativus L. HOM05D007229 ORTHO05D009131 5.0e-51 204.9 144 72.9
BcaB01g00004 Brassica carinata HOM05D007229 ORTHO05D009131 6.5e-51 204.5 179 64.2
BcaB01g00005 Brassica carinata HOM05D007229 ORTHO05D009131 6.5e-51 204.5 179 64.2
Carub.0005s2307 Capsella rubella HOM05D007229 ORTHO05D009131 1.1e-50 203.8 179 63.7
Sp5g06210 Schrenkiella parvula HOM05D007229 ORTHO05D009131 1.5e-50 203.4 177 63.8
Sed0026302 Sechium edule HOM05D007229 ORTHO05D009131 5.5e-50 201.4 178 61.8
ClCG07G004950 Citrullus lanatus HOM05D007229 ORTHO05D009131 7.2e-50 201.1 174 63.8
BcaC07g39946 Brassica carinata HOM05D007229 ORTHO05D009131 9.4e-50 200.7 136 74.3
C08p31620 Brassica napus HOM05D007229 ORTHO05D009131 9.4e-50 200.7 136 74.3
BolC8t50783H Brassica oleracea HOM05D007229 ORTHO05D009131 9.4e-50 200.7 136 74.3
HPP92_017919 Vanilla planifolia HOM05D007229 ORTHO05D009131 1.2e-49 200.3 136 70.6
A09p49260 Brassica napus HOM05D007229 ORTHO05D009131 1.6e-49 199.9 135 74.1
BraA09t40379Z Brassica rapa HOM05D007229 ORTHO05D009131 1.6e-49 199.9 135 74.1
THA.LOC104824356 Tarenaya hassleriana HOM05D007229 ORTHO05D009131 2.7e-49 199.1 119 81.5
AUR62012362 Chenopodium quinoa HOM05D007229 ORTHO05D009131 3.6e-49 198.7 177 63.8
SEGI_31216 Sequoiadendron giganteum HOM05D007229 ORTHO05D009131 2.3e-48 196.1 156 63.5
Os01g0823600 Oryza sativa ssp. japonica HOM05D007229 ORTHO05D009131 3.0e-48 195.7 141 68.8
Aqoxy2G00722 Aquilegia oxysepala HOM05D007229 ORTHO05D009131 8.8e-48 194.1 174 63.8
AL5G37620 Arabidopsis lyrata HOM05D007229 ORTHO05D009131 1.5e-47 193.4 175 61.1
Thhalv10006268m.g Eutrema salsugineum HOM05D007229 ORTHO05D009131 2.0e-47 193.0 179 60.9
Aa31LG10G11190 Aethionema arabicum HOM05D007229 ORTHO05D009131 5.7e-47 191.4 185 57.8
AUR62031491 Chenopodium quinoa HOM05D000154 ORTHO05D000092 5.7e-47 191.4 137 71.5
Pp3c19_14460 Physcomitrium patens HOM05D007229 ORTHO05D009131 1.2e-44 183.7 117 74.4
BcaB02g07659 Brassica carinata HOM05D007229 ORTHO05D009131 5.9e-44 181.4 185 57.3
Mapoly0032s0114 Marchantia polymorpha HOM05D007229 ORTHO05D009131 1.3e-43 180.3 116 70.7
SMO230G0076 Selaginella moellendorffii HOM05D007229 ORTHO05D009131 3.6e-41 172.2 126 67.5
Nitab4.5_0003695g0030 Nicotiana tabacum HOM05D007229 ORTHO05D009131 4.7e-41 171.8 177 56.5
Nitab4.5_0000109g0540 Nicotiana tabacum HOM05D000154 ORTHO05D009131 1.0e-40 170.6 166 57.8
vmacro09972 Vaccinium macrocarpon HOM05D007229 ORTHO05D009131 1.8e-40 169.9 177 54.2
ATR0681G125 Amborella trichopoda HOM05D007229 ORTHO05D009131 6.8e-40 167.9 113 76.1
SMO230G0102 Selaginella moellendorffii HOM05D007229 ORTHO05D009131 1.4e-32 143.7 106 67.9
SMO230G0113 Selaginella moellendorffii HOM05D007229 ORTHO05D009131 1.4e-32 143.7 106 67.9
Ah.10g035980 Amaranthus hybridus HOM05D007229 ORTHO05D009131 2.9e-30 136.0 175 52.6
SabraUnG0004000 Salix brachista HOM05D007229 ORTHO05D009131 3.0e-27 125.9 123 61.8
Sed0009884 Sechium edule HOM05D007229 ORTHO05D009131 5.0e-27 125.2 124 55.6
FAN01G1364 Fragaria x ananassa HOM05D007229 ORTHO05D009131 1.5e-23 113.6 113 62.8
Nn2g10342 Nelumbo nucifera HOM05D000154 ORTHO05D000092 9.8e-23 110.9 67 76.1
MD01G1165900 Malus domestica HOM05D000154 ORTHO05D000092 2.4e-21 106.3 58 81.0
AagrBONN_evm.TU.Sc2ySwM_344.3614 Anthoceros agrestis HOM05D007229 ORTHO05D009131 2.1e-20 103.2 117 51.3
Zm00001eb149430 Zea mays HOM05D007229 ORTHO05D009131 7.8e-20 101.3 118 54.2
Eucgr.J00129 Eucalyptus grandis HOM05D007229 ORTHO05D009131 3.3e-10 69.3 95 52.6


User provided reference genes

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