Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.B9FWIC Arachis hypogaea HOM05D005769 ORTHO05D006851 2.0e-89 332.4 170 100.0
arahy.Tifrunner.gnm1.ann1.B7V00M Arachis hypogaea HOM05D005769 ORTHO05D006851 1.4e-87 326.2 170 98.2
LjContig00351g0007061 Lotus japonicus HOM05D005769 ORTHO05D006851 2.2e-59 232.6 175 74.9
Lalb_Chr04g0248581 Lupinus albus HOM05D005769 ORTHO05D006851 6.3e-59 231.1 170 70.6
Lj4g0016834 Lotus japonicus HOM05D005769 ORTHO05D006851 3.1e-58 228.8 175 74.3
Glyma.14G025400 Glycine max HOM05D005769 ORTHO05D006851 4.7e-54 214.9 172 71.5
Medtr5g092090 Medicago truncatula HOM05D005769 ORTHO05D006851 2.3e-53 212.6 180 70.0
Phvul.008G265600 Phaseolus vulgaris HOM05D005769 ORTHO05D006851 2.3e-53 212.6 172 69.8
VMungo0647G1996 Vigna mungo HOM05D005769 ORTHO05D006851 5.7e-52 208.0 175 69.1
Ca_06306_v3 Cicer arietinum L. HOM05D005769 ORTHO05D006851 4.9e-51 204.9 180 70.6
Glyma.02G289500 Glycine max HOM05D005769 ORTHO05D006851 2.3e-48 196.1 174 66.1
Thecc.07G043800 Theobroma cacao HOM05D005769 ORTHO05D006851 2.5e-47 192.6 170 61.2
Duzib213G1024 Durio zibethinus HOM05D005769 ORTHO05D006851 3.3e-47 192.2 170 62.9
Duzib170G0312 Durio zibethinus HOM05D005769 ORTHO05D006851 1.8e-45 186.4 170 60.0
COL.COLO4_09632 Corchorus olitorius HOM05D005769 ORTHO05D006851 2.3e-45 186.0 171 58.5
Potri.001G421000 Populus trichocarpa HOM05D005769 ORTHO05D006851 3.1e-45 185.7 168 57.1
QL08p011874 Quercus lobata HOM05D005769 ORTHO05D006851 5.2e-45 184.9 171 59.1
Prupe.4G209200 Prunus persica HOM05D005769 ORTHO05D006851 1.2e-44 183.7 170 58.8
Haze_09647 Corylus avellana HOM05D005769 ORTHO05D006851 5.8e-44 181.4 170 58.8
QL08p012043 Quercus lobata HOM05D005769 ORTHO05D006851 5.8e-44 181.4 171 57.9
Cfa020385 Carpinus fangiana HOM05D005769 ORTHO05D006851 1.3e-43 180.3 170 58.8
Gorai.002G086700 Gossypium raimondii HOM05D005769 ORTHO05D006851 3.7e-43 178.7 172 57.6
MD11G1222100 Malus domestica HOM05D005769 ORTHO05D006851 3.7e-43 178.7 170 56.5
Gohir.D01G065000 Gossypium hirsutum HOM05D005769 ORTHO05D006851 6.4e-43 177.9 170 57.6
TWI38G1097 Tripterygium wilfordii HOM05D005769 ORTHO05D006851 4.1e-42 175.3 171 56.1
CiPaw.12G128000 Carya illinoinensis HOM05D005769 ORTHO05D006851 9.2e-42 174.1 170 58.8
Potri.011G136600 Populus trichocarpa HOM05D005769 ORTHO05D006851 2.7e-41 172.6 170 54.7
Nn1g03582 Nelumbo nucifera HOM05D005769 ORTHO05D006851 6.0e-41 171.4 172 56.4
CiPaw.11G187200 Carya illinoinensis HOM05D005769 ORTHO05D006851 1.3e-40 170.2 170 55.9
Sabra16G0285900 Salix brachista HOM05D005769 ORTHO05D006851 1.3e-40 170.2 166 56.0
Dinv40735 Davidia involucrata HOM05D005769 ORTHO05D006851 1.7e-40 169.9 168 55.4
Gohir.A01G077900 Gossypium hirsutum HOM05D005769 ORTHO05D006851 1.7e-40 169.9 172 57.0
TWI39G0743 Tripterygium wilfordii HOM05D005769 ORTHO05D006851 3.0e-40 169.1 170 53.5
Manes.03G126700 Manihot esculenta HOM05D005769 ORTHO05D006851 3.9e-40 168.7 170 54.1
Gorai.009G425000 Gossypium raimondii HOM05D005769 ORTHO05D006851 1.5e-39 166.8 171 55.0
Cpa.g.sc97.35 Carica papaya HOM05D005769 ORTHO05D006851 1.9e-39 166.4 170 56.5
Gohir.A04G019100 Gossypium hirsutum HOM05D005769 ORTHO05D006851 1.9e-39 166.4 171 55.0
PGR031G3409 Punica granatum HOM05D005769 ORTHO05D006851 1.9e-39 166.4 170 56.5
Ciclev10010329m.g Citrus clementina HOM05D005769 ORTHO05D006851 2.5e-39 166.0 170 57.6
FvH4_3g22210 Fragaria vesca HOM05D005769 ORTHO05D006851 2.5e-39 166.0 171 56.1
FAN11G0604 Fragaria x ananassa HOM05D005769 ORTHO05D006851 2.5e-39 166.0 171 56.1
Gohir.D05G366600 Gossypium hirsutum HOM05D005769 ORTHO05D006851 2.5e-39 166.0 171 55.0
RcHm_v2.0_Chr5g0038281 Rosa chinensis HOM05D005769 ORTHO05D006851 5.6e-39 164.9 171 55.0
FAN16G0333 Fragaria x ananassa HOM05D005769 ORTHO05D006851 7.3e-39 164.5 171 55.6
Atru.chr2.3278 Acer truncatum HOM05D005769 ORTHO05D006851 1.2e-38 163.7 169 55.0
Lj6g0021335 Lotus japonicus HOM05D005769 ORTHO05D006851 2.8e-38 162.5 167 57.5
FAN21G0668 Fragaria x ananassa HOM05D005769 ORTHO05D006851 3.6e-38 162.2 171 55.6
Psat2g015240 Pisum sativum HOM05D005769 ORTHO05D006851 4.7e-38 161.8 180 57.2
Glyma.18G101700 Glycine max HOM05D005769 ORTHO05D006851 6.2e-38 161.4 165 55.8
FAN25G3736 Fragaria x ananassa HOM05D005769 ORTHO05D006851 1.1e-37 160.6 171 55.0
TAR626G0147 Trochodendron aralioides HOM05D005769 ORTHO05D006851 2.6e-36 156.0 170 50.0
Manes.15G073700 Manihot esculenta HOM05D005769 ORTHO05D006851 3.4e-36 155.6 170 52.4
THA.LOC104813420 Tarenaya hassleriana HOM05D005769 ORTHO05D006851 9.8e-36 154.1 169 51.5
Hma1.2p1_1271F.1_g271830 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 3.7e-35 152.1 170 50.6
Hma1.2p1_1609F.1_g293426 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 3.7e-35 152.1 170 50.6
VMungo0540G0361 Vigna mungo HOM05D005769 ORTHO05D006851 3.7e-35 152.1 165 55.2
CANSAT21G1553 Cannabis sativa HOM05D005769 ORTHO05D006851 1.4e-34 150.2 171 53.2
Nitab4.5_0000749g0110 Nicotiana tabacum HOM05D005769 ORTHO05D006851 1.4e-34 150.2 170 51.2
Glyma.09G100100 Glycine max HOM05D005769 ORTHO05D006851 3.2e-34 149.1 165 54.5
Nitab4.5_0000653g0070 Nicotiana tabacum HOM05D005769 ORTHO05D006851 9.2e-34 147.5 170 50.6
Rhsim04G0001000 Rhododendron simsii HOM05D005769 ORTHO05D006851 2.1e-33 146.4 171 49.7
Aqoxy1G03294 Aquilegia oxysepala HOM05D005769 ORTHO05D006851 6.0e-33 144.8 171 50.9
Rhsim04G0002100 Rhododendron simsii HOM05D005769 ORTHO05D006851 6.0e-33 144.8 171 49.1
PGSC0003DMG400014393 Solanum tuberosum HOM05D005769 ORTHO05D006851 1.0e-32 144.1 172 47.1
arahy.Tifrunner.gnm1.ann1.0M423A Arachis hypogaea HOM05D005769 ORTHO05D006851 6.6e-32 141.4 172 50.6
Sopen10g002310 Solanum pennellii HOM05D005769 ORTHO05D006851 1.1e-31 140.6 172 47.1
Solyc10g006360.2 Solanum lycopersicum HOM05D005769 ORTHO05D006851 1.9e-31 139.8 172 47.1
Lj8E167T2 Lonicera japonica HOM05D005769 ORTHO05D006851 2.8e-30 136.0 171 49.7
Nitab4.5_0000397g0340 Nicotiana tabacum HOM05D005769 ORTHO05D006851 3.6e-30 135.6 171 48.0
Oeu005460.1 Olea europaea HOM05D005769 ORTHO05D006851 6.2e-30 134.8 169 45.6
MSTRG.6907 Avicennia marina HOM05D005769 ORTHO05D006851 1.8e-29 133.3 166 47.6
Lj1P869T51 Lonicera japonica HOM05D005769 ORTHO05D006851 3.1e-29 132.5 169 46.2
Peaxi162Scf01097g00025 Petunia axillaris HOM05D005769 ORTHO05D006851 3.1e-29 132.5 170 42.4
ClCG05G014450 Citrullus lanatus HOM05D005769 ORTHO05D006851 4.0e-29 132.1 168 45.2
Nitab4.5_0013016g0010 Nicotiana tabacum HOM05D005769 ORTHO05D006851 4.0e-29 132.1 159 47.2
Cc05_g13510 Coffea canephora HOM05D005769 ORTHO05D006851 8.9e-29 131.0 170 47.1
Peaxi162Scf00450g00084 Petunia axillaris HOM05D005769 ORTHO05D006851 2.0e-28 129.8 167 48.5
Phvul.006G038800 Phaseolus vulgaris HOM05D005769 ORTHO05D006851 3.4e-28 129.0 165 49.1
PGSC0003DMG400001093 Solanum tuberosum HOM05D005769 ORTHO05D006851 7.6e-28 127.9 170 45.9
AT5G54850 Arabidopsis thaliana HOM05D005769 ORTHO05D006851 3.8e-27 125.6 215 40.9
CAN.G337.106 Capsicum annuum HOM05D005769 ORTHO05D006851 1.1e-26 124.0 171 45.0
unitig_0.g2389 Utricularia gibba HOM05D005769 ORTHO05D006851 1.1e-26 124.0 170 42.9
Aa31LG3G10760 Aethionema arabicum HOM05D005769 ORTHO05D006851 1.4e-26 123.6 170 42.9
Sed0023999 Sechium edule HOM05D005769 ORTHO05D006851 5.4e-26 121.7 168 40.5
Migut.M01783 Erythranthe guttata HOM05D005769 ORTHO05D006851 7.1e-26 121.3 166 44.0
AL8G30290 Arabidopsis lyrata HOM05D005769 ORTHO05D006851 9.2e-26 120.9 215 40.0
PSO675G2145 Papaver somniferum HOM05D005769 ORTHO05D006851 9.2e-26 120.9 165 44.2
Solyc07g064320.3 Solanum lycopersicum HOM05D005769 ORTHO05D006851 2.7e-25 119.4 171 43.9
Sopen07g032470 Solanum pennellii HOM05D005769 ORTHO05D006851 3.5e-25 119.0 171 43.9
PGSC0003DMG400013920 Solanum tuberosum HOM05D005769 ORTHO05D006851 3.5e-25 119.0 171 45.0
Sed0008399 Sechium edule HOM05D005769 ORTHO05D006851 6.0e-25 118.2 168 41.1
Migut.H01842 Erythranthe guttata HOM05D005769 ORTHO05D006851 7.8e-25 117.9 172 44.8
BcaC04g20292 Brassica carinata HOM05D005769 ORTHO05D006851 1.0e-24 117.5 175 42.9
C09p45400 Brassica napus HOM05D005769 ORTHO05D006851 1.0e-24 117.5 175 42.9
BolC9t57410H Brassica oleracea HOM05D005769 ORTHO05D006851 1.0e-24 117.5 175 42.9
BraA10t43314Z Brassica rapa HOM05D005769 ORTHO05D006851 1.0e-24 117.5 175 42.9
Lalb_Chr10g0106921 Lupinus albus HOM05D005769 ORTHO05D006851 1.3e-24 117.1 129 55.0
BcaB08g35851 Brassica carinata HOM05D005769 ORTHO05D006851 1.7e-24 116.7 193 42.0
CARHR268180 Cardamine hirsuta HOM05D005769 ORTHO05D006851 2.3e-24 116.3 195 40.0
SalBow7G1695 Salvia bowleyana HOM05D005769 ORTHO05D006851 1.9e-23 113.2 171 45.0
A10p12180 Brassica napus HOM05D005769 ORTHO05D006851 4.3e-23 112.1 209 38.8
PSO541G5959 Papaver somniferum HOM05D005769 ORTHO05D006851 5.6e-23 111.7 165 43.6
PSO832G0238 Papaver somniferum HOM05D005769 ORTHO05D006851 1.6e-22 110.2 167 41.3
MELO3C018076.2 Cucumis melo HOM05D005769 ORTHO05D006851 2.1e-22 109.8 171 41.5
CsaV3_3G023280 Cucumis sativus L. HOM05D005769 ORTHO05D006851 3.6e-22 109.0 170 41.2
MBI18_g09843_MAGBIO Magnolia biondii HOM05D005769 ORTHO05D006851 1.8e-21 106.7 142 52.1
AUR62020499 Chenopodium quinoa HOM05D005769 ORTHO05D006851 3.1e-21 105.9 178 42.7
Thhalv10014809m.g Eutrema salsugineum HOM05D005769 ORTHO05D006851 4.0e-21 105.5 194 36.6
Sc16g0006260 Simmondsia chinensis HOM05D005769 ORTHO05D006851 4.0e-21 105.5 209 39.7
Carub.0008s1514 Capsella rubella HOM05D005769 ORTHO05D006851 6.9e-21 104.8 177 37.9
HanXRQChr11g0336271 Helianthus annuus HOM05D005769 ORTHO05D006851 1.2e-20 104.0 170 43.5
Sp6g16810 Schrenkiella parvula HOM05D005769 ORTHO05D006851 1.2e-20 104.0 195 36.9
Actinidia09713 Actinidia chinensis HOM05D005769 ORTHO05D006851 1.5e-20 103.6 156 43.6
AUR62015707 Chenopodium quinoa HOM05D005769 ORTHO05D006851 4.4e-20 102.1 171 42.1
Hma1.2p1_0328F.1_g126860 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 9.9e-20 100.9 166 38.6
Hma1.2p1_1748F.1_g300680 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 1.3e-19 100.5 165 38.2
ECA236G2121 Erigeron canadensis HOM05D005769 ORTHO05D006851 3.8e-19 99.0 177 39.0
Oeu062604.3 Olea europaea HOM05D005769 ORTHO05D006851 8.4e-19 97.8 145 46.9
Oeu042920.1 Olea europaea HOM05D005249 ORTHO05D006457 1.2e-17 94.0 153 43.1
SGA_v2.0_scaffold8G04301 Striga asiatica HOM05D005769 ORTHO05D006851 2.1e-17 93.2 171 36.8
Ah.04g165680 Amaranthus hybridus HOM05D005769 ORTHO05D006851 3.5e-17 92.4 159 42.8
Zm00001eb322840 Zea mays HOM05D005769 ORTHO05D006851 6.0e-17 91.7 166 41.0
HPP92_014114 Vanilla planifolia HOM05D005769 ORTHO05D006851 7.8e-17 91.3 163 41.7
ATR0752G130 Amborella trichopoda HOM05D005769 ORTHO05D006851 1.7e-16 90.1 195 36.9
CSS0032413 Camellia sinensis var. sinensis HOM05D005769 ORTHO05D006851 1.7e-16 90.1 155 34.8
ECA234G1543 Erigeron canadensis HOM05D005769 ORTHO05D006851 1.1e-15 87.4 161 36.0
CDE02G4799 Ceratophyllum demersum HOM05D005249 ORTHO05D006457 3.6e-14 82.4 159 38.4
Cc05_g04810 Coffea canephora HOM05D005769 ORTHO05D006851 6.2e-14 81.6 156 33.3
Lsat_1_v5_gn_5_125321 Lactuca sativa HOM05D005769 ORTHO05D006851 2.0e-12 76.6 170 31.2
HanXRQChr05g0159131 Helianthus annuus HOM05D005769 ORTHO05D006851 2.4e-10 69.7 167 37.7
DCAR_021174 Daucus carota HOM05D005769 ORTHO05D006851 4.6e-09 65.5 162 30.9
HPP92_012322 Vanilla planifolia HOM05D005769 ORTHO05D006851 1.1e-07 60.8 162 33.3
HPP92_012395 Vanilla planifolia HOM05D005769 ORTHO05D006851 1.1e-07 60.8 162 32.7
Oeu021395.2 Olea europaea HOM05D005769 ORTHO05D006851 5.6e-07 58.5 72 41.7
SEGI_38354 Sequoiadendron giganteum HOM05D005769 ORTHO05D006851 6.2e-06 55.1 226 23.9


User provided reference genes

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