Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.B7Q2TL Arachis hypogaea HOM05D004124 ORTHO05D004779 2.0e-170 602.4 324 100.0
arahy.Tifrunner.gnm1.ann1.JS6392 Arachis hypogaea HOM05D004124 ORTHO05D004779 2.1e-143 512.7 297 96.0
CANSAT01G0376 Cannabis sativa HOM05D004124 ORTHO05D004779 1.1e-128 463.8 296 85.8
Glyma.18G005700 Glycine max HOM05D004124 ORTHO05D004779 3.2e-128 462.2 296 88.2
Lj6g0002227 Lotus japonicus HOM05D004124 ORTHO05D004779 2.1e-127 459.5 297 87.5
Glyma.11G251300 Glycine max HOM05D004124 ORTHO05D004779 1.8e-126 456.4 296 87.5
Ca_16453_v3 Cicer arietinum L. HOM05D004124 ORTHO05D004779 6.7e-126 454.5 296 86.5
Haze_12426 Corylus avellana HOM05D004124 ORTHO05D004779 6.7e-126 454.5 297 86.2
VMungo1383G0738 Vigna mungo HOM05D004124 ORTHO05D004779 1.5e-125 453.4 301 85.0
Phvul.001G262500 Phaseolus vulgaris HOM05D004124 ORTHO05D004779 2.0e-125 453.0 296 86.8
Potri.001G056000 Populus trichocarpa HOM05D004124 ORTHO05D004779 5.7e-125 451.4 297 84.5
Manes.12G010400 Manihot esculenta HOM05D004124 ORTHO05D004779 1.1e-123 447.2 296 83.4
Duzib251G0523 Durio zibethinus HOM05D004124 ORTHO05D004779 2.4e-123 446.0 296 83.1
COL.COLO4_20412 Corchorus olitorius HOM05D004124 ORTHO05D004779 1.5e-122 443.4 251 84.1
RcHm_v2.0_Chr4g0430131 Rosa chinensis HOM05D004124 ORTHO05D004779 2.6e-122 442.6 296 81.8
GSVIVG01010495001 Vitis vinifera HOM05D004124 ORTHO05D004779 5.9e-122 441.4 296 84.8
Sabra01G0040400 Salix brachista HOM05D004124 ORTHO05D004779 1.3e-121 440.3 296 83.1
Gorai.012G176300 Gossypium raimondii HOM05D004124 ORTHO05D004779 1.7e-121 439.9 297 81.1
TWI18G0339 Tripterygium wilfordii HOM05D004124 ORTHO05D004779 3.8e-121 438.7 296 82.4
Gohir.A04G140100 Gossypium hirsutum HOM05D004124 ORTHO05D004779 5.0e-121 438.3 296 81.1
CiPaw.06G103200 Carya illinoinensis HOM05D004124 ORTHO05D004779 1.1e-120 437.2 296 84.1
MELO3C011859.2 Cucumis melo HOM05D004124 ORTHO05D004779 1.1e-120 437.2 296 81.8
CsaV3_5G030210 Cucumis sativus L. HOM05D004124 ORTHO05D004779 1.1e-120 437.2 296 81.8
FAN17G0270 Fragaria x ananassa HOM05D004124 ORTHO05D004779 1.1e-120 437.2 296 79.7
Psat5g096680 Pisum sativum HOM05D004124 ORTHO05D004779 2.5e-120 436.0 300 82.0
Gohir.D04G183300 Gossypium hirsutum HOM05D004124 ORTHO05D004779 9.4e-120 434.1 298 80.5
Ciclev10033913m.g Citrus clementina HOM05D004124 ORTHO05D004779 1.2e-119 433.7 318 78.3
FvH4_4g23660 Fragaria vesca HOM05D004124 ORTHO05D004779 1.6e-119 433.3 296 80.1
FAN12G0357 Fragaria x ananassa HOM05D004124 ORTHO05D004779 1.6e-119 433.3 296 80.1
FAN22G1987 Fragaria x ananassa HOM05D004124 ORTHO05D004779 2.7e-119 432.6 296 80.1
PGR102G1761 Punica granatum HOM05D004124 ORTHO05D004779 3.6e-119 432.2 296 81.4
Dinv10949 Davidia involucrata HOM05D004124 ORTHO05D004779 4.7e-119 431.8 296 82.1
Eucgr.H04636 Eucalyptus grandis HOM05D004124 ORTHO05D004779 6.1e-119 431.4 296 81.1
Potri.003G172500 Populus trichocarpa HOM05D004124 ORTHO05D004779 6.1e-119 431.4 296 82.8
FAN07G1336 Fragaria x ananassa HOM05D004124 ORTHO05D004779 8.0e-119 431.0 296 79.1
Lalb_Chr11g0075781 Lupinus albus HOM05D004124 ORTHO05D004779 2.3e-118 429.5 296 81.4
MD16G1120200 Malus domestica HOM05D004124 ORTHO05D004779 8.8e-118 427.6 298 81.2
QL03p052498 Quercus lobata HOM05D004124 ORTHO05D004779 8.8e-118 427.6 296 80.1
Medtr3g085190 Medicago truncatula HOM05D004124 ORTHO05D004779 2.0e-117 426.4 299 80.3
Cc11_g16980 Coffea canephora HOM05D004124 ORTHO05D004779 2.6e-117 426.0 299 78.6
Atru.chr11.2334 Acer truncatum HOM05D004124 ORTHO05D004779 2.8e-116 422.5 298 80.9
Gorai.005G166600 Gossypium raimondii HOM05D004124 ORTHO05D004779 4.8e-116 421.8 298 80.2
Prupe.1G225000 Prunus persica HOM05D004124 ORTHO05D004779 1.4e-115 420.2 297 80.5
Gohir.A03G125700 Gossypium hirsutum HOM05D004124 ORTHO05D004779 4.5e-114 415.2 297 79.5
Gohir.D02G148500 Gossypium hirsutum HOM05D004124 ORTHO05D004779 4.5e-114 415.2 299 80.3
Nn5g26967 Nelumbo nucifera HOM05D004124 ORTHO05D004779 7.7e-114 414.5 304 78.3
TPR.G17791 Trifolium pratense HOM05D004124 ORTHO05D004779 1.7e-113 413.3 297 80.1
Duzib248G0967 Durio zibethinus HOM05D004124 ORTHO05D004779 5.5e-112 408.3 296 79.4
Lalb_Chr08g0230601 Lupinus albus HOM05D004124 ORTHO05D004779 5.5e-112 408.3 296 80.4
Lalb_Chr13g0294351 Lupinus albus HOM05D004124 ORTHO05D004779 1.6e-111 406.8 296 78.4
Sabra03G0126200 Salix brachista HOM05D004124 ORTHO05D004779 2.7e-111 406.0 279 81.0
Nn8g41237 Nelumbo nucifera HOM05D004124 ORTHO05D004779 6.1e-111 404.8 296 76.7
TAR626G1310 Trochodendron aralioides HOM05D004124 ORTHO05D004779 6.1e-111 404.8 251 77.3
Rhsim12G0025300 Rhododendron simsii HOM05D004124 ORTHO05D004779 4.4e-109 398.7 298 76.8
TAR383G0859 Trochodendron aralioides HOM05D004124 ORTHO05D004779 1.3e-108 397.1 249 76.7
MSTRG.8009 Avicennia marina HOM05D004124 ORTHO05D004779 6.3e-108 394.8 251 76.1
Lalb_Chr07g0187111 Lupinus albus HOM05D004124 ORTHO05D004779 1.4e-107 393.7 298 77.9
Sed0002251 Sechium edule HOM05D004124 ORTHO05D004779 1.4e-107 393.7 296 77.7
MBI13_g33572_MAGBIO Magnolia biondii HOM05D004124 ORTHO05D004779 3.1e-107 392.5 253 75.9
MSTRG.500 Avicennia marina HOM05D004124 ORTHO05D004779 1.6e-106 390.2 251 73.7
Actinidia09646 Actinidia chinensis HOM05D004124 ORTHO05D004779 2.0e-106 389.8 242 78.1
AUR62005628 Chenopodium quinoa HOM05D004124 ORTHO05D004779 4.5e-106 388.7 300 75.7
AUR62028920 Chenopodium quinoa HOM05D004124 ORTHO05D004779 1.1e-104 384.0 300 75.3
PSO063G2768 Papaver somniferum HOM05D004124 ORTHO05D004779 2.5e-104 382.9 257 73.9
Nitab4.5_0000861g0060 Nicotiana tabacum HOM05D004124 ORTHO05D004779 3.2e-104 382.5 299 73.2
PSO170G5699 Papaver somniferum HOM05D004124 ORTHO05D004779 7.2e-104 381.3 257 73.5
Actinidia30642 Actinidia chinensis HOM05D004124 ORTHO05D004779 9.4e-104 380.9 296 75.3
Aa31sc584G20 Aethionema arabicum HOM05D004124 ORTHO05D004779 1.2e-103 380.6 297 73.7
Thhalv10018870m.g Eutrema salsugineum HOM05D004124 ORTHO05D004779 1.6e-103 380.2 253 73.5
THA.LOC104807133 Tarenaya hassleriana HOM05D004124 ORTHO05D004779 1.6e-103 380.2 297 74.1
Peaxi162Scf00128g01335 Petunia axillaris HOM05D004124 ORTHO05D004779 8.0e-103 377.9 249 73.9
Carub.0002s1361 Capsella rubella HOM05D004124 ORTHO05D004779 1.4e-102 377.1 251 72.5
EL10Ac6g13513 Beta vulgaris HOM05D004124 ORTHO05D004779 2.3e-102 376.3 298 73.2
PGSC0003DMG400034304 Solanum tuberosum HOM05D004124 ORTHO05D004779 3.0e-102 375.9 296 73.6
Thecc.02G206600 Theobroma cacao HOM05D004124 ORTHO05D004779 3.0e-102 375.9 221 82.4
Sopen05g010890 Solanum pennellii HOM05D004124 ORTHO05D004779 5.2e-102 375.2 296 73.6
THA.LOC104825500 Tarenaya hassleriana HOM05D004124 ORTHO05D004779 6.8e-102 374.8 322 68.9
THA.LOC104807526 Tarenaya hassleriana HOM05D004124 ORTHO05D004779 8.8e-102 374.4 296 70.9
DCAR_024098 Daucus carota HOM05D004124 ORTHO05D004779 1.5e-101 373.6 252 71.8
AL2G25860 Arabidopsis lyrata HOM05D004124 ORTHO05D004779 4.4e-101 372.1 252 72.2
Migut.K00950 Erythranthe guttata HOM05D004124 ORTHO05D004779 1.3e-100 370.5 296 72.3
Sp5g22270 Schrenkiella parvula HOM05D004124 ORTHO05D004779 1.7e-100 370.2 253 72.7
Solyc05g015500.4 Solanum lycopersicum HOM05D004124 ORTHO05D004779 2.2e-100 369.8 294 73.1
Actinidia08066 Actinidia chinensis HOM05D004124 ORTHO05D004779 3.7e-100 369.0 331 68.3
AT1G67325 Arabidopsis thaliana HOM05D004124 ORTHO05D004779 1.1e-99 367.5 252 71.4
vmacro01057 Vaccinium macrocarpon HOM05D004124 ORTHO05D004779 1.1e-99 367.5 353 64.3
CAN.G163.7 Capsicum annuum HOM05D004124 ORTHO05D004779 1.4e-99 367.1 246 73.2
Hund25468 Selenicereus undatus HOM05D004124 ORTHO05D004779 1.4e-99 367.1 319 69.6
Hund06093 Selenicereus undatus HOM05D004124 ORTHO05D004779 9.1e-99 364.4 252 71.4
CARHR059820 Cardamine hirsuta HOM05D004124 ORTHO05D004779 1.2e-98 364.0 252 71.4
SGA_v2.0_scaffold391G50628 Striga asiatica HOM05D004124 ORTHO05D004779 1.6e-98 363.6 297 71.0
Manes.13G011200 Manihot esculenta HOM05D004124 ORTHO05D004779 1.7e-97 360.1 299 70.2
ATR0626G238 Amborella trichopoda HOM05D004124 ORTHO05D004779 4.7e-95 352.1 299 69.2
Lj6A827G48 Lonicera japonica HOM05D004124 ORTHO05D004779 8.0e-95 351.3 221 75.1
DCAR_026459 Daucus carota HOM05D004124 ORTHO05D004779 1.2e-93 347.4 233 70.0
ECA233G0726 Erigeron canadensis HOM05D004124 ORTHO05D004779 2.0e-93 346.7 296 69.9
Aqoxy7G02609 Aquilegia oxysepala HOM05D004124 ORTHO05D004779 3.4e-93 345.9 253 69.2
ECA234G0541 Erigeron canadensis HOM05D004124 ORTHO05D004779 5.7e-93 345.1 245 67.8
CiPaw.05G108900 Carya illinoinensis HOM05D004124 ORTHO05D004779 7.5e-93 344.7 253 79.8
Sed0008103 Sechium edule HOM05D004124 ORTHO05D004779 9.8e-93 344.4 296 69.9
BcaB03g15346 Brassica carinata HOM05D004124 ORTHO05D004779 1.3e-92 344.0 254 68.5
Lj3A1069T45 Lonicera japonica HOM05D004124 ORTHO05D004779 1.1e-91 340.9 232 70.3
Eucgr.B03499 Eucalyptus grandis HOM05D004124 ORTHO05D004779 2.7e-90 336.3 299 68.9
HanXRQChr17g0569011 Helianthus annuus HOM05D004124 ORTHO05D004779 3.3e-88 329.3 250 66.0
C06p38790 Brassica napus HOM05D004124 ORTHO05D004779 5.6e-88 328.6 256 66.4
Duzib268G1736 Durio zibethinus HOM05D004124 ORTHO05D004779 9.5e-88 327.8 241 79.7
BolC6t38971H Brassica oleracea HOM05D004124 ORTHO05D004779 2.8e-87 326.2 308 66.6
HanXRQChr12g0372641 Helianthus annuus HOM05D004124 ORTHO05D004779 6.1e-87 325.1 251 65.7
BraA07t30886Z Brassica rapa HOM05D004124 ORTHO05D004779 3.7e-84 315.8 311 65.3
A07p32620 Brassica napus HOM05D004124 ORTHO05D004779 4.9e-84 315.5 309 65.4
Sc04g0010190 Simmondsia chinensis HOM05D004124 ORTHO05D004779 1.1e-83 314.3 299 67.6
A07p33920 Brassica napus HOM05D000660 ORTHO05D000766 2.4e-83 313.2 257 64.2
C06p42940 Brassica napus HOM05D004124 ORTHO05D004779 3.2e-83 312.8 254 64.2
CSS0020706 Camellia sinensis var. sinensis HOM05D004124 ORTHO05D004779 3.2e-83 312.8 240 77.5
ClCG11G013590 Citrullus lanatus HOM05D004124 ORTHO05D004779 9.2e-83 311.2 302 64.2
unitig_749.g13306 Utricularia gibba HOM05D004124 ORTHO05D004779 1.2e-82 310.8 251 63.3
CSS0002767 Camellia sinensis var. sinensis HOM05D004124 ORTHO05D004779 1.6e-82 310.5 207 74.9
HanXRQChr12g0361221 Helianthus annuus HOM05D004124 ORTHO05D004779 3.0e-81 306.2 251 63.3
BolC6t39143H Brassica oleracea HOM05D004124 ORTHO05D004779 8.6e-81 304.7 253 63.2
BraA07t31018Z Brassica rapa HOM05D000660 ORTHO05D000766 1.5e-80 303.9 254 63.4
Lsat_1_v5_gn_4_400 Lactuca sativa HOM05D004124 ORTHO05D004779 2.5e-80 303.1 261 63.6
Ah.03g136110 Amaranthus hybridus HOM05D004124 ORTHO05D004779 1.1e-75 287.7 243 61.7
Oeu006524.1 Olea europaea HOM05D004124 ORTHO05D004779 2.1e-74 283.5 208 66.3
Zm00001eb174550 Zea mays HOM05D004124 ORTHO05D004779 4.7e-71 272.3 255 57.3
Oeu049141.1 Olea europaea HOM05D004124 ORTHO05D004779 1.4e-70 270.8 228 61.0
Nitab4.5_0003900g0010 Nicotiana tabacum HOM05D004124 ORTHO05D004779 8.9e-70 268.1 240 68.3
CDE04G3109 Ceratophyllum demersum HOM05D004124 ORTHO05D004779 3.7e-68 262.7 250 58.4
Zm00001eb035500 Zea mays HOM05D004124 ORTHO05D004779 1.7e-65 253.8 255 53.3
HPP92_015269 Vanilla planifolia HOM05D004124 ORTHO05D004779 5.1e-65 252.3 210 61.0
Lsat_1_v5_gn_8_147801 Lactuca sativa HOM05D004124 ORTHO05D004779 1.5e-64 250.8 255 55.7
Os08g0521400 Oryza sativa ssp. japonica HOM05D004124 ORTHO05D004779 3.9e-57 226.1 257 50.6
Cpa.g.sc43.62 Carica papaya HOM05D004124 ORTHO05D004779 1.1e-46 191.4 212 47.6
Lsat_1_v5_gn_5_94821 Lactuca sativa HOM05D004124 ORTHO05D004779 1.9e-43 180.6 257 56.0
HanXRQChr08g0221261 Helianthus annuus HOM05D004124 ORTHO05D004779 2.4e-43 180.3 131 67.2
Pp3c4_8110 Physcomitrium patens HOM05D004124 ORTHO05D004779 1.0e-33 148.3 248 40.7
AagrBONN_evm.TU.Sc2ySwM_340.309 Anthoceros agrestis HOM05D004124 ORTHO05D004779 1.8e-33 147.5 260 37.3
SMO200G0023 Selaginella moellendorffii HOM05D004124 ORTHO05D004779 1.9e-32 144.1 244 38.5
PGR083G0898 Punica granatum HOM05D004124 ORTHO05D004779 4.5e-29 132.9 184 45.7
Mapoly0005s0267 Marchantia polymorpha HOM05D004124 ORTHO05D004779 3.8e-28 129.8 258 33.7
CiPaw.13G027200 Carya illinoinensis HOM05D002637 ORTHO05D008095 1.9e-27 127.5 246 38.2
CiPaw.14G021000 Carya illinoinensis HOM05D004124 ORTHO05D004779 1.9e-27 127.5 249 36.1
arahy.Tifrunner.gnm1.ann1.FNBZ5S Arachis hypogaea HOM05D004124 ORTHO05D004779 1.3e-25 121.3 240 38.3
Cfa011079 Carpinus fangiana HOM05D002637 ORTHO05D008095 3.3e-24 116.7 270 33.3
Glyma.18G252600 Glycine max HOM05D004124 ORTHO05D004779 5.7e-24 115.9 241 35.7
Nn1g00866 Nelumbo nucifera HOM05D004124 ORTHO05D004779 9.7e-24 115.2 248 36.3
TAR375G0412 Trochodendron aralioides HOM05D004124 ORTHO05D004779 2.8e-23 113.6 248 36.7
PSO782G3756 Papaver somniferum HOM05D004124 ORTHO05D004779 3.7e-23 113.2 243 35.0
TAR374G0532 Trochodendron aralioides HOM05D004124 ORTHO05D004779 3.7e-23 113.2 238 36.1
Aqoxy3G02746 Aquilegia oxysepala HOM05D004124 ORTHO05D004779 6.3e-23 112.5 248 33.5
arahy.Tifrunner.gnm1.ann1.4H3LGZ Arachis hypogaea HOM05D004124 ORTHO05D004779 2.4e-22 110.5 252 36.1
BcaNung07398 Brassica carinata HOM05D004124 ORTHO05D004779 3.1e-22 110.2 53 94.3
Lj3g0004507 Lotus japonicus HOM05D004124 ORTHO05D004779 6.9e-22 109.0 244 34.8
CDE06G1866 Ceratophyllum demersum HOM05D004124 ORTHO05D004779 7.7e-21 105.5 258 32.2
Phvul.008G046200 Phaseolus vulgaris HOM05D004124 ORTHO05D004779 1.3e-20 104.8 244 34.8
CDE06G1514 Ceratophyllum demersum HOM05D004124 ORTHO05D004779 1.4e-19 101.3 225 33.8
CBR_g53713 Chara braunii HOM05D004124 ORTHO05D004779 4.2e-19 99.8 263 33.5
Ca_14066_v3 Cicer arietinum L. HOM05D004124 ORTHO05D004779 7.2e-19 99.0 248 31.9
Os07g0490600 Oryza sativa ssp. japonica HOM05D004124 ORTHO05D004779 1.5e-16 91.3 260 30.0
PGR083G1960 Punica granatum HOM05D000500 ORTHO05D000367 2.5e-16 90.5 56 73.2
Eucgr.L03169 Eucalyptus grandis HOM05D004124 ORTHO05D004779 3.3e-16 90.1 103 50.5
Zm00001eb105300 Zea mays HOM05D004124 ORTHO05D004779 5.7e-16 89.4 257 31.5
GSVIVG01018266001 Vitis vinifera HOM05D004124 ORTHO05D004779 9.7e-16 88.6 218 33.0
Glyma.09G242400 Glycine max HOM05D004124 ORTHO05D004779 1.7e-15 87.8 174 35.6
Actinidia20714 Actinidia chinensis HOM05D004124 ORTHO05D004779 1.4e-14 84.7 39 92.3
AagrBONN_evm.TU.Sc2ySwM_368.334 Anthoceros agrestis HOM05D004124 ORTHO05D004779 2.4e-14 84.0 213 30.0
HanXRQChr12g0379451 Helianthus annuus HOM05D004124 ORTHO05D004779 5.3e-14 82.8 54 68.5
QL04p030567 Quercus lobata HOM05D004124 ORTHO05D004779 4.5e-13 79.7 177 31.6
Psat7g021520 Pisum sativum HOM05D004124 ORTHO05D004779 2.9e-12 77.0 258 27.1
CANSAT21G0875 Cannabis sativa HOM05D004124 ORTHO05D004779 5.0e-12 76.3 174 35.6
PSO063G6881 Papaver somniferum HOM05D004124 ORTHO05D004779 9.4e-11 72.0 173 33.5
QL04p030562 Quercus lobata HOM05D004124 ORTHO05D000004 1.8e-09 67.8 51 56.9
Haze_02835 Corylus avellana HOM05D004124 ORTHO05D004779 4.4e-08 63.2 148 33.1
ATR0057G076 Amborella trichopoda HOM05D004124 ORTHO05D004779 1.7e-07 61.2 51 49.0
SMO181G0003 Selaginella moellendorffii HOM05D004124 ORTHO05D004779 1.1e-06 58.5 30 73.3
Zm00001eb321720 Zea mays HOM05D004124 ORTHO05D004779 1.1e-06 58.5 58 44.8


User provided reference genes

Program Settings