Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.B5C26Y Arachis hypogaea HOM05D002744 ORTHO05D008989 9.3e-125 450.3 238 100.0
arahy.Tifrunner.gnm1.ann1.N80L0Z Arachis hypogaea HOM05D002744 ORTHO05D008989 2.2e-94 349.4 187 97.9
arahy.Tifrunner.gnm1.ann1.HIE7A8 Arachis hypogaea HOM05D002744 ORTHO05D008989 6.5e-94 347.8 187 98.4
Glyma.18G022300 Glycine max HOM05D002744 ORTHO05D008989 3.8e-78 295.4 187 80.2
Phvul.001G248100 Phaseolus vulgaris HOM05D002744 ORTHO05D008989 5.0e-78 295.0 187 81.3
Glyma.11G234700 Glycine max HOM05D002744 ORTHO05D008989 6.5e-78 294.7 187 79.7
Ca_15179_v3 Cicer arietinum L. HOM05D002744 ORTHO05D008989 1.8e-72 276.6 187 75.9
Lalb_Chr08g0231351 Lupinus albus HOM05D002744 ORTHO05D008989 1.6e-71 273.5 187 75.9
TPR.G28641 Trifolium pratense HOM05D002744 ORTHO05D008989 3.8e-70 268.9 187 74.9
Medtr3g072120 Medicago truncatula HOM05D002744 ORTHO05D008989 5.0e-70 268.5 188 74.5
Lj6g0011522 Lotus japonicus HOM05D002744 ORTHO05D008989 1.1e-69 267.3 189 73.5
CiPaw.02G197300 Carya illinoinensis HOM05D002744 ORTHO05D008989 5.5e-69 265.0 187 71.7
Ciclev10032836m.g Citrus clementina HOM05D002744 ORTHO05D008989 2.1e-68 263.1 187 70.6
Haze_17321 Corylus avellana HOM05D002744 ORTHO05D008989 6.8e-67 258.1 185 71.9
GSVIVG01032723001 Vitis vinifera HOM05D002744 ORTHO05D008989 2.2e-65 253.1 187 67.9
QL08p064284 Quercus lobata HOM05D002744 ORTHO05D008989 2.8e-65 252.7 187 68.4
Dinv21809 Davidia involucrata HOM05D002744 ORTHO05D008989 4.9e-65 251.9 188 69.7
Cc02_g05720 Coffea canephora HOM05D002744 ORTHO05D008989 8.3e-65 251.1 187 69.5
Eucgr.G03110 Eucalyptus grandis HOM05D002744 ORTHO05D008989 1.8e-64 250.0 191 67.5
Thecc.10G007100 Theobroma cacao HOM05D002744 ORTHO05D008989 4.5e-63 245.4 187 66.8
Gohir.D04G071200 Gossypium hirsutum HOM05D002744 ORTHO05D008989 7.8e-63 244.6 187 66.3
Rhsim09G0182800 Rhododendron simsii HOM05D002744 ORTHO05D008989 1.3e-62 243.8 188 68.6
MD07G1229300 Malus domestica HOM05D002744 ORTHO05D008989 2.9e-62 242.7 190 65.3
TWI38G2197 Tripterygium wilfordii HOM05D002744 ORTHO05D008989 2.9e-62 242.7 181 69.1
RcHm_v2.0_Chr1g0371481 Rosa chinensis HOM05D002744 ORTHO05D008989 3.8e-62 242.3 194 62.4
VMungo1383G3724 Vigna mungo HOM05D002744 ORTHO05D008989 3.8e-62 242.3 155 79.4
FvH4_7g25501 Fragaria vesca HOM05D002744 ORTHO05D008989 1.5e-61 240.4 190 62.1
Actinidia00986 Actinidia chinensis HOM05D002744 ORTHO05D008989 2.5e-61 239.6 186 69.4
FAN06G0491 Fragaria x ananassa HOM05D002744 ORTHO05D006546 3.3e-61 239.2 190 61.6
Gohir.A05G332500 Gossypium hirsutum HOM05D002744 ORTHO05D008989 3.3e-61 239.2 189 65.6
Hund13513 Selenicereus undatus HOM05D002744 ORTHO05D008989 4.3e-61 238.8 187 65.8
PGR142G3983 Punica granatum HOM05D002744 ORTHO05D008989 5.6e-61 238.4 187 64.7
MD01G1161400 Malus domestica HOM05D002744 ORTHO05D008989 2.8e-60 236.1 187 63.1
Potri.008G075600 Populus trichocarpa HOM05D002744 ORTHO05D008989 2.8e-60 236.1 186 67.2
Nitab4.5_0000928g0050 Nicotiana tabacum HOM05D002744 ORTHO05D008989 3.6e-60 235.7 191 67.0
FAN03G1008 Fragaria x ananassa HOM05D002744 ORTHO05D006546 6.1e-60 235.0 190 61.1
Peaxi162Scf00284g00123 Petunia axillaris HOM05D002744 ORTHO05D008989 1.0e-59 234.2 192 65.6
FAN10G0428 Fragaria x ananassa HOM05D002744 ORTHO05D006546 2.3e-59 233.0 190 61.1
Sopen02g021690 Solanum pennellii HOM05D002744 ORTHO05D008989 2.3e-59 233.0 192 66.7
Sabra08G0056200 Salix brachista HOM05D002744 ORTHO05D008989 1.2e-58 230.7 180 66.7
Duzib114G0765 Durio zibethinus HOM05D002744 ORTHO05D008989 1.5e-58 230.3 189 63.0
Cpa.g.sc19.99 Carica papaya HOM05D002744 ORTHO05D008989 2.0e-58 229.9 181 65.7
MSTRG.12212 Avicennia marina HOM05D002744 ORTHO05D008989 4.4e-58 228.8 178 65.2
Gorai.012G080100 Gossypium raimondii HOM05D002744 ORTHO05D008989 4.4e-58 228.8 199 61.8
CsaV3_5G010720 Cucumis sativus L. HOM05D002744 ORTHO05D008989 1.3e-57 227.3 189 61.9
Sed0024728 Sechium edule HOM05D002744 ORTHO05D008989 1.7e-57 226.9 187 60.4
vmacro09984 Vaccinium macrocarpon HOM05D002744 ORTHO05D008989 1.7e-57 226.9 221 57.5
COL.COLO4_25825 Corchorus olitorius HOM05D002744 ORTHO05D006546 2.2e-57 226.5 174 66.1
EL10Ac2g04293 Beta vulgaris HOM05D002744 ORTHO05D008989 3.7e-57 225.7 187 61.5
AUR62022976 Chenopodium quinoa HOM05D002744 ORTHO05D008989 4.9e-57 225.3 186 62.9
Nn2g11068 Nelumbo nucifera HOM05D002744 ORTHO05D008989 4.9e-57 225.3 186 62.4
CANSAT56G2966 Cannabis sativa HOM05D002744 ORTHO05D008989 6.4e-57 224.9 187 58.3
Hma1.2p1_1240F.1_g269640 Hydrangea macrophylla HOM05D002744 ORTHO05D008989 6.4e-57 224.9 155 72.9
HanXRQChr17g0560791 Helianthus annuus HOM05D002744 ORTHO05D008989 1.4e-56 223.8 193 59.1
Atru.BG.256.p Acer truncatum HOM05D002744 ORTHO05D008989 1.9e-56 223.4 153 74.5
Manes.10G008400 Manihot esculenta HOM05D002744 ORTHO05D008989 4.1e-56 222.2 188 61.2
Carub.0005s2299 Capsella rubella HOM05D002744 ORTHO05D008989 1.6e-55 220.3 184 57.6
AL5G37530 Arabidopsis lyrata HOM05D002744 ORTHO05D008989 2.0e-55 219.9 184 58.2
THA.LOC104824346 Tarenaya hassleriana HOM05D002744 ORTHO05D008989 2.0e-55 219.9 184 60.3
Sp5g06290 Schrenkiella parvula HOM05D002744 ORTHO05D008989 4.6e-55 218.8 184 59.8
CSS0017108 Camellia sinensis var. sinensis HOM05D002744 ORTHO05D006546 7.8e-55 218.0 153 71.9
Migut.A01076 Erythranthe guttata HOM05D002744 ORTHO05D008989 1.0e-54 217.6 186 61.3
Thhalv10006252m.g Eutrema salsugineum HOM05D002744 ORTHO05D008989 1.0e-54 217.6 184 59.2
PSO017G6389 Papaver somniferum HOM05D002744 ORTHO05D008989 3.9e-54 215.7 192 54.7
ECA233G4001 Erigeron canadensis HOM05D002744 ORTHO05D008989 6.6e-54 214.9 195 56.4
PSO170G0776 Papaver somniferum HOM05D002744 ORTHO05D008989 1.9e-53 213.4 190 54.7
DCAR_011891 Daucus carota HOM05D002744 ORTHO05D008989 2.5e-53 213.0 155 67.7
Nitab4.5_0000263g0100 Nicotiana tabacum HOM05D002744 ORTHO05D008989 5.6e-53 211.8 160 69.4
SGA_v2.0_scaffold36G14267 Striga asiatica HOM05D002744 ORTHO05D008989 9.5e-53 211.1 177 65.0
Lju41C22T0 Lonicera japonica HOM05D002744 ORTHO05D008989 1.6e-52 210.3 159 67.3
AUR62012334 Chenopodium quinoa HOM05D002744 ORTHO05D008989 2.1e-52 209.9 153 66.7
Lj8C58T1 Lonicera japonica HOM05D002744 ORTHO05D008989 2.1e-52 209.9 159 67.3
AT3G56210 Arabidopsis thaliana HOM05D002744 ORTHO05D008989 2.8e-52 209.5 183 57.9
BcaB08g34630 Brassica carinata HOM05D002744 ORTHO05D008989 3.6e-52 209.1 184 57.6
FAN01G1994 Fragaria x ananassa HOM05D002744 ORTHO05D006546 1.8e-51 206.8 212 51.4
A09p49190 Brassica napus HOM05D002744 ORTHO05D008989 1.2e-50 204.1 185 57.3
CARHR166360 Cardamine hirsuta HOM05D002744 ORTHO05D008989 2.0e-50 203.4 163 60.7
SalBow3G4547 Salvia bowleyana HOM05D002744 ORTHO05D008989 4.4e-50 202.2 183 57.4
BraA09t40372Z Brassica rapa HOM05D002744 ORTHO05D008989 2.2e-49 199.9 193 54.4
Os03g0665800 Oryza sativa ssp. japonica HOM05D002744 ORTHO05D008989 3.7e-49 199.1 163 60.1
Lsat_1_v5_gn_8_13401 Lactuca sativa HOM05D002744 ORTHO05D008989 9.2e-48 194.5 155 60.6
TAR369G0133 Trochodendron aralioides HOM05D000826 ORTHO05D001831 1.0e-46 191.0 147 66.0
HPP92_013966 Vanilla planifolia HOM05D002744 ORTHO05D008989 1.3e-46 190.7 171 58.5
Oeu026180.1 Olea europaea HOM05D002744 ORTHO05D008989 3.0e-46 189.5 137 67.9
Hma1.2p1_1240F.1_g269630 Hydrangea macrophylla HOM05D002744 ORTHO05D008989 1.1e-45 187.6 134 72.4
unitig_32.g11706 Utricularia gibba HOM05D002744 ORTHO05D008989 1.2e-44 184.1 179 53.1
unitig_33.g30211 Utricularia gibba HOM05D002744 ORTHO05D008989 1.2e-44 184.1 179 53.1
EL10Ac2g04295 Beta vulgaris HOM05D002744 ORTHO05D008989 3.6e-44 182.6 146 63.7
C08p31530 Brassica napus HOM05D002744 ORTHO05D008989 1.4e-43 180.6 147 62.6
ATR0681G046 Amborella trichopoda HOM05D000826 ORTHO05D008989 4.0e-43 179.1 209 48.3
BcaC07g39936 Brassica carinata HOM05D002744 ORTHO05D008989 5.2e-43 178.7 145 62.8
Prupe.2G259500 Prunus persica HOM05D002744 ORTHO05D008989 1.2e-42 177.6 135 68.1
SEGI_09795 Sequoiadendron giganteum HOM05D002744 ORTHO05D008989 7.5e-42 174.9 183 51.9
ClCG07G004800 Citrullus lanatus HOM05D002744 ORTHO05D008989 1.9e-40 170.2 189 49.7
Lj1A963T49 Lonicera japonica HOM05D002744 ORTHO05D008989 5.4e-40 168.7 111 74.8
CDE02G4284 Ceratophyllum demersum HOM05D002744 ORTHO05D008989 9.2e-40 167.9 133 62.4
Zm00001eb065520 Zea mays HOM05D002744 ORTHO05D008989 4.6e-39 165.6 121 63.6
PGSC0003DMG400010239 Solanum tuberosum HOM05D002744 ORTHO05D008989 1.1e-37 161.0 124 69.4
Solyc02g076790.4 Solanum lycopersicum HOM05D002744 ORTHO05D008989 3.3e-37 159.5 124 68.5
BcaB01g00016 Brassica carinata HOM05D002744 ORTHO05D008989 5.6e-37 158.7 152 54.6
BolC8t50775H Brassica oleracea HOM05D002744 ORTHO05D008989 1.2e-36 157.5 184 46.2
TAR623G0678 Trochodendron aralioides HOM05D002744 ORTHO05D008989 4.0e-35 152.5 121 66.1
MELO3C020107.2 Cucumis melo HOM05D002744 ORTHO05D008989 6.8e-35 151.8 189 46.0
Psat5g130160 Pisum sativum HOM05D002744 ORTHO05D008989 1.5e-34 150.6 102 72.5
Aa31LG10G11120 Aethionema arabicum HOM05D002744 ORTHO05D008989 3.8e-33 146.0 117 61.5
BcaB01g00017 Brassica carinata HOM05D002744 ORTHO05D008989 9.2e-32 141.4 167 47.3
Gohir.A10G240750 Gossypium hirsutum HOM05D002744 ORTHO05D008989 1.0e-30 137.9 116 61.2
SEGI_38813 Sequoiadendron giganteum HOM05D002744 ORTHO05D008989 2.3e-30 136.7 107 62.6
Hma1.2p1_0322F.1_g124790 Hydrangea macrophylla HOM05D002744 ORTHO05D008989 4.4e-26 122.5 151 45.7
Mapoly0001s0439 Marchantia polymorpha HOM05D002744 ORTHO05D008989 1.7e-25 120.6 162 41.4
Sc10g0002800 Simmondsia chinensis HOM05D002744 ORTHO05D008989 1.1e-24 117.9 131 51.1
CDE01G0559 Ceratophyllum demersum HOM05D002744 ORTHO05D008989 3.1e-19 99.8 140 40.7
Psat5g125520 Pisum sativum HOM05D002744 ORTHO05D008989 2.4e-16 90.1 61 68.9
Pp3c8_1670 Physcomitrium patens HOM05D002744 ORTHO05D008989 6.0e-15 85.5 98 44.9
SMO147G0318 Selaginella moellendorffii HOM05D002744 ORTHO05D008989 7.4e-13 78.6 148 35.8
C06p23580 Brassica napus HOM05D002744 ORTHO05D008989 4.9e-09 65.9 49 57.1
CAN.G118.19 Capsicum annuum HOM05D002744 ORTHO05D008989 3.0e-06 56.6 49 61.2


User provided reference genes

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