Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.B51XMH Arachis hypogaea HOM05D006847 ORTHO05D008685 1.3e-229 799.3 392 100.0
arahy.Tifrunner.gnm1.ann1.9XA9EY Arachis hypogaea HOM05D006847 ORTHO05D008685 8.2e-227 790.0 392 99.0
Psat4g123400 Pisum sativum HOM05D006847 ORTHO05D008685 4.5e-185 651.4 403 77.9
Ca_22680_v3 Cicer arietinum L. HOM05D006847 ORTHO05D008685 5.2e-181 637.9 403 77.4
Glyma.02G124600 Glycine max HOM05D006847 ORTHO05D008685 4.1e-178 628.2 401 77.1
LjContig00408g0014580 Lotus japonicus HOM05D006847 ORTHO05D008685 3.6e-174 615.1 395 75.9
Lj2g0006896 Lotus japonicus HOM05D006847 ORTHO05D008685 4.1e-170 601.7 405 73.6
Gohir.A03G107200 Gossypium hirsutum HOM05D006847 ORTHO05D008685 7.8e-169 597.4 399 73.2
Ca_05192_v3 Cicer arietinum L. HOM05D006847 ORTHO05D008685 1.0e-168 597.0 404 74.0
Medtr0328s0040 Medicago truncatula HOM05D006847 ORTHO05D008685 8.6e-168 594.0 401 73.6
Gorai.005G148200 Gossypium raimondii HOM05D006847 ORTHO05D008685 1.5e-167 593.2 399 72.4
Lj6C772T8 Lonicera japonica HOM05D006847 ORTHO05D008685 3.6e-166 588.6 410 69.3
MD13G1054900 Malus domestica HOM05D006847 ORTHO05D008685 8.0e-166 587.4 406 69.5
Dinv33999 Davidia involucrata HOM05D006847 ORTHO05D008685 3.1e-165 585.5 408 69.6
Medtr8g065720 Medicago truncatula HOM05D006847 ORTHO05D008685 5.2e-165 584.7 402 72.4
Potri.008G113000 Populus trichocarpa HOM05D006847 ORTHO05D008685 4.4e-164 581.6 402 71.4
Thecc.02G320200 Theobroma cacao HOM05D006847 ORTHO05D008685 5.8e-164 581.3 408 71.3
ClCG05G023430 Citrullus lanatus HOM05D006847 ORTHO05D008685 1.7e-163 579.7 400 71.0
COL.COLO4_27774 Corchorus olitorius HOM05D006847 ORTHO05D008685 1.7e-163 579.7 402 71.4
Haze_11844 Corylus avellana HOM05D006847 ORTHO05D008685 3.7e-163 578.6 402 70.1
TAR622G1172 Trochodendron aralioides HOM05D006847 ORTHO05D008685 6.4e-163 577.8 407 68.6
Ciclev10031661m.g Citrus clementina HOM05D006847 ORTHO05D008685 1.4e-162 576.6 405 70.9
Cfa008830 Carpinus fangiana HOM05D006847 ORTHO05D008685 7.0e-162 574.3 403 69.2
Oeu001640.1 Olea europaea HOM05D006847 ORTHO05D008685 2.0e-161 572.8 409 68.2
TPR.G20006 Trifolium pratense HOM05D006847 ORTHO05D008685 2.0e-161 572.8 406 72.2
Actinidia24040 Actinidia chinensis HOM05D006847 ORTHO05D008685 6.0e-161 571.2 399 69.2
PGR119G0337 Punica granatum HOM05D006847 ORTHO05D008685 7.8e-161 570.9 417 68.3
GSVIVG01010124001 Vitis vinifera HOM05D006847 ORTHO05D008685 7.8e-161 570.9 408 69.6
Potri.010G136300 Populus trichocarpa HOM05D006847 ORTHO05D008685 1.0e-160 570.5 398 69.8
Duzib268G0361 Durio zibethinus HOM05D006847 ORTHO05D008685 1.3e-160 570.1 407 68.8
MD16G1053800 Malus domestica HOM05D006847 ORTHO05D008685 1.7e-160 569.7 402 68.4
Eucgr.G02408 Eucalyptus grandis HOM05D006847 ORTHO05D008685 3.9e-160 568.5 405 68.6
Manes.14G092000 Manihot esculenta HOM05D006847 ORTHO05D008685 3.9e-160 568.5 403 69.2
CSS0010285 Camellia sinensis var. sinensis HOM05D006847 ORTHO05D008685 1.1e-159 567.0 401 67.8
SalBow2G2641 Salvia bowleyana HOM05D006847 ORTHO05D008685 1.1e-159 567.0 407 66.3
Gohir.D02G132300 Gossypium hirsutum HOM05D006847 ORTHO05D008685 4.3e-159 565.1 398 69.8
Sed0007808 Sechium edule HOM05D006847 ORTHO05D008685 4.3e-159 565.1 394 68.5
Lj3C1026T6 Lonicera japonica HOM05D006847 ORTHO05D008685 5.6e-159 564.7 408 67.4
TAR374G0132 Trochodendron aralioides HOM05D006847 ORTHO05D008685 5.6e-159 564.7 410 69.0
DCAR_023729 Daucus carota HOM05D006847 ORTHO05D008685 7.3e-159 564.3 409 68.5
MELO3C012175.2 Cucumis melo HOM05D006847 ORTHO05D008685 9.5e-159 563.9 394 70.6
Cc11_g11380 Coffea canephora HOM05D006847 ORTHO05D008685 1.2e-158 563.5 411 67.4
CANSAT64G2316 Cannabis sativa HOM05D006847 ORTHO05D008685 1.6e-158 563.1 404 68.3
FAN17G2474 Fragaria x ananassa HOM05D006847 ORTHO05D008685 1.6e-158 563.1 422 65.6
Aqoxy3G03766 Aquilegia oxysepala HOM05D006847 ORTHO05D008685 2.8e-158 562.4 406 66.3
Lsat_1_v5_gn_8_36700 Lactuca sativa HOM05D006847 ORTHO05D008685 2.8e-158 562.4 404 68.6
Atru.chr11.1527 Acer truncatum HOM05D006847 ORTHO05D008685 6.2e-158 561.2 405 67.7
Nitab4.5_0002309g0040 Nicotiana tabacum HOM05D006847 ORTHO05D008685 1.1e-157 560.5 406 67.5
FAN12G2539 Fragaria x ananassa HOM05D006847 ORTHO05D008685 1.4e-157 560.1 423 65.7
CsaV3_5G033580 Cucumis sativus L. HOM05D006847 ORTHO05D008685 1.8e-157 559.7 399 68.7
Sed0008138 Sechium edule HOM05D006847 ORTHO05D008685 2.3e-157 559.3 394 67.8
Migut.L01151 Erythranthe guttata HOM05D006847 ORTHO05D008685 3.1e-157 558.9 395 68.6
Sopen05g006440 Solanum pennellii HOM05D006847 ORTHO05D008685 3.1e-157 558.9 405 69.4
CiPaw.06G095800 Carya illinoinensis HOM05D006847 ORTHO05D008685 4.0e-157 558.5 404 67.8
HanXRQChr08g0215061 Helianthus annuus HOM05D006847 ORTHO05D008685 4.0e-157 558.5 408 66.2
PGSC0003DMG400019650 Solanum tuberosum HOM05D006847 ORTHO05D008685 4.0e-157 558.5 404 68.8
CAN.G869.31 Capsicum annuum HOM05D006847 ORTHO05D008685 6.8e-157 557.8 410 67.3
Migut.N00803 Erythranthe guttata HOM05D006847 ORTHO05D008685 3.4e-156 555.4 391 68.0
TWI75G1304 Tripterygium wilfordii HOM05D006847 ORTHO05D008685 3.4e-156 555.4 401 68.8
Sopen01g032850 Solanum pennellii HOM05D006847 ORTHO05D008685 4.4e-156 555.1 402 66.9
Nitab4.5_0000259g0050 Nicotiana tabacum HOM05D006847 ORTHO05D008685 7.5e-156 554.3 403 67.2
MBI14_g08222_MAGBIO Magnolia biondii HOM05D006847 ORTHO05D008685 9.8e-156 553.9 406 67.0
ECA233G1196 Erigeron canadensis HOM05D006847 ORTHO05D008685 1.3e-155 553.5 404 66.1
MSTRG.7721 Avicennia marina HOM05D006847 ORTHO05D008685 2.2e-155 552.7 405 67.7
PGSC0003DMG400001803 Solanum tuberosum HOM05D006847 ORTHO05D008685 4.1e-154 548.5 404 66.6
Oeu021813.1 Olea europaea HOM05D006847 ORTHO05D008685 7.1e-154 547.7 402 68.2
Hma1.2p1_1348F.1_g277280 Hydrangea macrophylla HOM05D006847 ORTHO05D008685 1.5e-151 540.0 403 67.0
Aqoxy3G00572 Aquilegia oxysepala HOM05D006847 ORTHO05D008685 2.1e-142 509.6 410 62.9
ATR0691G250 Amborella trichopoda HOM05D006847 ORTHO05D008685 5.2e-141 505.0 401 61.1
FAN22G0943 Fragaria x ananassa HOM05D006847 ORTHO05D008685 2.0e-140 503.1 426 60.1
HPP92_020537 Vanilla planifolia HOM05D006847 ORTHO05D008685 1.8e-133 479.9 402 56.5
TPR.G29773 Trifolium pratense HOM05D006847 ORTHO05D008685 8.7e-120 434.5 309 70.9
RcHm_v2.0_Chr4g0437071 Rosa chinensis HOM05D006847 ORTHO05D008685 4.3e-119 432.2 323 65.0
Actinidia19898 Actinidia chinensis HOM05D006847 ORTHO05D008685 5.3e-117 425.2 241 80.5
Actinidia31921 Actinidia chinensis HOM05D006847 ORTHO05D008685 1.2e-116 424.1 297 70.0
HPP92_020469 Vanilla planifolia HOM05D006847 ORTHO05D008685 1.6e-113 413.7 390 52.3
Pp3c6_17060 Physcomitrium patens HOM05D006847 ORTHO05D008685 2.5e-111 406.4 421 49.2
AagrBONN_evm.TU.Sc2ySwM_368.2780 Anthoceros agrestis HOM05D006847 ORTHO05D008685 1.3e-110 404.1 394 52.5
ATR0691G163 Amborella trichopoda HOM05D006847 ORTHO05D008685 1.6e-110 403.7 336 60.4
Mapoly0024s0128 Marchantia polymorpha HOM05D006847 ORTHO05D008685 6.9e-109 398.3 415 49.2
HPP92_026164 Vanilla planifolia HOM05D006847 ORTHO05D008685 5.5e-106 388.7 375 51.7
Pp3c5_12950 Physcomitrium patens HOM05D006847 ORTHO05D008685 1.0e-104 384.4 428 46.7
FvH4_4g28930 Fragaria vesca HOM05D006847 ORTHO05D008685 2.5e-103 379.8 293 64.5
Pp3c27_4530 Physcomitrium patens HOM05D006847 ORTHO05D008685 9.1e-101 371.3 437 44.2
Pp3c4_7760 Physcomitrium patens HOM05D006847 ORTHO05D008685 1.3e-94 350.9 444 43.5
Pp3c3_23290 Physcomitrium patens HOM05D006847 ORTHO05D008685 6.7e-88 328.6 457 40.7
Peaxi162Scf00188g00923 Petunia axillaris HOM05D006847 ORTHO05D008685 1.2e-81 307.8 260 63.1
Psat2g097480 Pisum sativum HOM05D006847 ORTHO05D008685 5.3e-77 292.4 248 64.9
Psat2g097440 Pisum sativum HOM05D006847 ORTHO05D008685 1.0e-67 261.5 147 81.6
Cpa.g.c44692 Carica papaya HOM05D006847 ORTHO05D008685 2.9e-67 260.0 141 83.7
Medtr8g069545 Medicago truncatula HOM05D006847 ORTHO05D008685 2.9e-67 260.0 145 82.8
Nn4g23575 Nelumbo nucifera HOM05D006847 ORTHO05D008685 2.8e-65 253.4 149 76.5
CSS0031083 Camellia sinensis var. sinensis HOM05D006847 ORTHO05D008685 3.6e-65 253.1 291 48.1
SMO198G0052 Selaginella moellendorffii HOM05D006847 ORTHO05D008685 2.0e-60 237.3 166 60.2
SEGI_24845 Sequoiadendron giganteum HOM05D006847 ORTHO05D008685 4.3e-58 229.6 262 46.9
CSS0029748 Camellia sinensis var. sinensis HOM05D006847 ORTHO05D008685 6.4e-54 215.7 256 50.4
Sabra10G0104800 Salix brachista HOM05D006847 ORTHO05D008685 1.6e-52 211.1 257 47.9
Solyc05g010640.3 Solanum lycopersicum HOM05D006847 ORTHO05D008685 3.1e-48 196.8 196 56.1
Nn4g23574 Nelumbo nucifera HOM05D006847 ORTHO05D008685 1.1e-40 171.8 128 68.0
Pp3c16_11950 Physcomitrium patens HOM05D006847 ORTHO05D008685 1.7e-38 164.5 144 50.7
Solyc05g010630.4 Solanum lycopersicum HOM05D006847 ORTHO05D008685 4.9e-38 162.9 92 80.4
arahy.Tifrunner.gnm1.ann1.UQ0TL8 Arachis hypogaea HOM05D006847 ORTHO05D008685 3.3e-34 150.2 94 81.9
AagrBONN_evm.TU.Sc2ySwM_117.3731 Anthoceros agrestis HOM05D006847 ORTHO05D008685 1.6e-33 147.9 122 57.4
CSS0043445 Camellia sinensis var. sinensis HOM05D006847 ORTHO05D000152 1.1e-32 145.2 150 50.0
arahy.Tifrunner.gnm1.ann1.JA47JZ Arachis hypogaea HOM05D006847 ORTHO05D008685 5.8e-23 112.8 50 100.0
AagrBONN_evm.TU.Sc2ySwM_117.3730 Anthoceros agrestis HOM05D006847 ORTHO05D008685 1.7e-22 111.3 210 34.8
Cre06.g263550 Chlamydomonas reinhardtii HOM05D006847 ORTHO05D008685 1.1e-21 108.6 171 36.3
CAN.G992.5 Capsicum annuum HOM05D006847 ORTHO05D008685 4.3e-18 96.7 194 35.1
Sabra10G0104900 Salix brachista HOM05D006847 ORTHO05D008685 4.3e-18 96.7 103 51.5
SMO143G0243 Selaginella moellendorffii HOM05D006847 ORTHO05D008685 3.6e-17 93.6 103 43.7
Actinidia31922 Actinidia chinensis HOM05D006847 ORTHO05D008685 1.4e-16 91.7 57 73.7
SMO143G0192 Selaginella moellendorffii HOM05D006847 ORTHO05D008685 6.9e-16 89.4 103 40.8
SMO186G0008 Selaginella moellendorffii HOM05D006847 ORTHO05D008685 1.7e-14 84.7 103 39.8
MCO10G065 Micromonas commoda HOM05D006847 ORTHO05D008685 3.8e-14 83.6 138 38.4
SMO265G0021 Selaginella moellendorffii HOM05D006847 ORTHO05D008685 2.4e-13 80.9 103 38.8
Solyc01g081280.3 Solanum lycopersicum HOM05D006847 ORTHO05D008685 4.2e-13 80.1 51 66.7
Mapoly0013s0125 Marchantia polymorpha HOM05D016606 ORTHO05D018318 3.7e-09 67.0 161 27.3
Aa31LG5G22570 Aethionema arabicum HOM05D007024 ORTHO05D008865 1.1e-08 65.5 168 28.6
Manes.08G001700 Manihot esculenta HOM05D007024 ORTHO05D008865 1.4e-08 65.1 175 27.4
GSVIVG01025554001 Vitis vinifera HOM05D007024 ORTHO05D008865 2.2e-06 57.8 160 25.6


User provided reference genes

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