Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.B4KLFS Arachis hypogaea HOM05D002631 ORTHO05D002861 5.8e-189 664.1 338 100.0
arahy.Tifrunner.gnm1.ann1.Q8Q4RG Arachis hypogaea HOM05D002631 ORTHO05D002861 4.9e-63 245.7 126 98.4
Lj1g0010837 Lotus japonicus HOM05D002631 ORTHO05D002861 3.7e-26 123.2 150 54.0
Glyma.05G076300 Glycine max HOM05D002631 ORTHO05D002861 1.4e-25 121.3 139 54.7
Glyma.19G074200 Glycine max HOM05D002631 ORTHO05D002861 1.6e-24 117.9 141 51.8
Glyma.16G058500 Glycine max HOM05D002631 ORTHO05D002861 2.0e-24 117.5 147 54.4
Phvul.001G095300 Phaseolus vulgaris HOM05D002631 ORTHO05D002861 1.0e-23 115.2 147 53.1
Glyma.19G088700 Glycine max HOM05D002631 ORTHO05D002861 1.7e-23 114.4 144 53.5
COL.COLO4_17171 Corchorus olitorius HOM05D002631 ORTHO05D002861 1.1e-22 111.7 159 47.8
Medtr7g029620 Medicago truncatula HOM05D002631 ORTHO05D002861 1.1e-22 111.7 143 51.7
VMungo1383G3513 Vigna mungo HOM05D002631 ORTHO05D002861 2.5e-22 110.5 146 51.4
Phvul.004G055100 Phaseolus vulgaris HOM05D002631 ORTHO05D002861 7.2e-22 109.0 141 51.8
TPR.G38258 Trifolium pratense HOM05D002631 ORTHO05D002861 3.6e-21 106.7 146 50.7
Thecc.04G033600 Theobroma cacao HOM05D002631 ORTHO05D002861 4.7e-21 106.3 147 48.3
Lalb_Chr14g0363261 Lupinus albus HOM05D002631 ORTHO05D002861 1.8e-20 104.4 152 46.7
Medtr6g023580 Medicago truncatula HOM05D002631 ORTHO05D002861 1.8e-20 104.4 356 29.8
Manes.15G159300 Manihot esculenta HOM05D002631 ORTHO05D002861 5.2e-20 102.8 159 44.7
Gohir.D04G077800 Gossypium hirsutum HOM05D002631 ORTHO05D002861 1.2e-19 101.7 155 44.5
Gorai.012G087600 Gossypium raimondii HOM05D002631 ORTHO05D002861 1.2e-19 101.7 155 44.5
VMungo0464G1570 Vigna mungo HOM05D002631 ORTHO05D002861 1.2e-19 101.7 143 49.0
Lalb_Chr21g0317531 Lupinus albus HOM05D002631 ORTHO05D002861 9.8e-19 98.6 146 49.3
Gohir.D07G234300 Gossypium hirsutum HOM05D002631 ORTHO05D002861 2.2e-18 97.4 148 45.3
Manes.17G104100 Manihot esculenta HOM05D002631 ORTHO05D002861 2.2e-18 97.4 150 46.0
Gohir.A07G227200 Gossypium hirsutum HOM05D002631 ORTHO05D002861 2.8e-18 97.1 148 45.3
Psat7g264080 Pisum sativum HOM05D002631 ORTHO05D002861 2.8e-18 97.1 138 50.0
Psat1g085600 Pisum sativum HOM05D002631 ORTHO05D002861 3.7e-18 96.7 144 43.8
Ca_04425_v3 Cicer arietinum L. HOM05D002631 ORTHO05D002861 4.8e-18 96.3 144 44.4
TPR.G7520 Trifolium pratense HOM05D002631 ORTHO05D002861 6.3e-18 95.9 147 44.9
Gohir.A05G339300 Gossypium hirsutum HOM05D002631 ORTHO05D002861 8.3e-18 95.5 155 43.2
Gorai.001G269900 Gossypium raimondii HOM05D002631 ORTHO05D002861 8.3e-18 95.5 148 43.2
Lj2g0026031 Lotus japonicus HOM05D002631 ORTHO05D002861 8.3e-18 95.5 136 47.8
Hma1.2p1_0279F.1_g112600 Hydrangea macrophylla HOM05D002631 ORTHO05D002861 1.1e-17 95.1 154 41.6
Duzib187G0830 Durio zibethinus HOM05D002631 ORTHO05D002861 1.4e-17 94.7 155 42.6
arahy.Tifrunner.gnm1.ann1.XL7NKK Arachis hypogaea HOM05D002631 ORTHO05D002861 3.1e-17 93.6 140 50.0
Duzib147G0551 Durio zibethinus HOM05D002631 ORTHO05D002861 5.4e-17 92.8 156 44.9
Sabra16G0213400 Salix brachista HOM05D002631 ORTHO05D002861 5.4e-17 92.8 154 45.5
CiPaw.03G053800 Carya illinoinensis HOM05D002631 ORTHO05D002861 2.0e-16 90.9 150 42.7
arahy.Tifrunner.gnm1.ann1.B2269S Arachis hypogaea HOM05D002631 ORTHO05D002861 2.7e-16 90.5 140 47.9
Ciclev10016522m.g Citrus clementina HOM05D002631 ORTHO05D002861 4.5e-16 89.7 155 41.9
Cfa007243 Carpinus fangiana HOM05D002631 ORTHO05D002861 5.9e-16 89.4 165 41.2
Gohir.A09G034900 Gossypium hirsutum HOM05D002631 ORTHO05D002861 2.9e-15 87.0 149 43.6
Gorai.006G040600 Gossypium raimondii HOM05D002631 ORTHO05D002861 5.0e-15 86.3 149 43.6
Gohir.D09G035700 Gossypium hirsutum HOM05D002631 ORTHO05D002861 6.5e-15 85.9 149 43.6
Potri.001G332500 Populus trichocarpa HOM05D002631 ORTHO05D002861 6.5e-15 85.9 146 43.2
Duzib264G0548 Durio zibethinus HOM05D002631 ORTHO05D002861 1.1e-14 85.1 158 41.8
CiPaw.04G035400 Carya illinoinensis HOM05D002631 ORTHO05D002861 5.5e-14 82.8 150 40.0
Dinv10972 Davidia involucrata HOM05D002631 ORTHO05D002861 5.5e-14 82.8 144 43.8
Haze_14856 Corylus avellana HOM05D002631 ORTHO05D002861 9.5e-14 82.0 367 28.3
FvH4_6g53190 Fragaria vesca HOM05D002631 ORTHO05D002861 2.1e-13 80.9 149 42.3
FAN14G5847 Fragaria x ananassa HOM05D002631 ORTHO05D002861 2.1e-13 80.9 149 42.3
Atru.chr6.2535 Acer truncatum HOM05D002631 ORTHO05D002861 2.8e-13 80.5 166 39.2
Prupe.3G303900 Prunus persica HOM05D002631 ORTHO05D002861 1.0e-12 78.6 142 42.3
FAN05G0255 Fragaria x ananassa HOM05D002631 ORTHO05D002861 1.4e-12 78.2 149 43.0
Peaxi162Scf00700g00133 Petunia axillaris HOM05D002631 ORTHO05D002861 1.4e-12 78.2 135 39.3
Rhsim10G0007400 Rhododendron simsii HOM05D002631 ORTHO05D002861 2.3e-12 77.4 152 36.2
Hma1.2p1_1278F.1_g272420 Hydrangea macrophylla HOM05D002631 ORTHO05D002861 4.0e-12 76.6 147 37.4
Hma1.2p1_2105F.1_g314170 Hydrangea macrophylla HOM05D002631 ORTHO05D002861 1.2e-11 75.1 147 36.7
CANSAT64G0464 Cannabis sativa HOM05D002631 ORTHO05D002861 2.0e-11 74.3 158 36.1
CsaV3_3G027170 Cucumis sativus L. HOM05D002631 ORTHO05D002861 2.0e-11 74.3 142 39.4
MELO3C014870.2 Cucumis melo HOM05D002631 ORTHO05D002861 7.5e-11 72.4 142 38.7
FAN02G3740 Fragaria x ananassa HOM05D002631 ORTHO05D002861 7.5e-11 72.4 149 41.6
Cpa.g.c32694.2 Carica papaya HOM05D002631 ORTHO05D002861 9.8e-11 72.0 179 38.0
PGR142G2012 Punica granatum HOM05D002631 ORTHO05D002861 9.8e-11 72.0 160 35.6
RcHm_v2.0_Chr2g0175231 Rosa chinensis HOM05D002631 ORTHO05D002861 9.8e-11 72.0 149 40.3
CAN.G1751.2 Capsicum annuum HOM05D002631 ORTHO05D002861 1.3e-10 71.6 133 39.8
Oeu011958.2 Olea europaea HOM05D002631 ORTHO05D002861 1.3e-10 71.6 147 36.1
Solyc03g005030.3 Solanum lycopersicum HOM05D002631 ORTHO05D002861 1.3e-10 71.6 132 37.1
FAN09G0528 Fragaria x ananassa HOM05D002631 ORTHO05D002861 1.7e-10 71.2 130 42.3
MSTRG.24087 Avicennia marina HOM05D002631 ORTHO05D002861 2.8e-10 70.5 148 35.1
A03p32300 Brassica napus HOM05D002631 ORTHO05D002861 2.8e-10 70.5 123 39.8
C03p39350 Brassica napus HOM05D002631 ORTHO05D002861 3.7e-10 70.1 124 41.1
PGSC0003DMG400013426 Solanum tuberosum HOM05D002631 ORTHO05D002861 3.7e-10 70.1 132 39.4
Nn3g16504 Nelumbo nucifera HOM05D002631 ORTHO05D002861 4.9e-10 69.7 148 35.1
BraA03t12400Z Brassica rapa HOM05D002631 ORTHO05D002861 6.3e-10 69.3 123 39.0
DCAR_021775 Daucus carota HOM05D002631 ORTHO05D002861 6.3e-10 69.3 127 37.0
QL02p071781 Quercus lobata HOM05D002631 ORTHO05D002861 6.3e-10 69.3 173 35.3
Sed0018875 Sechium edule HOM05D002631 ORTHO05D002861 6.3e-10 69.3 142 40.8
Sopen03g001040 Solanum pennellii HOM05D002631 ORTHO05D002861 6.3e-10 69.3 132 36.4
Actinidia30886 Actinidia chinensis HOM05D002631 ORTHO05D002861 8.3e-10 68.9 146 37.7
MSTRG.3083 Avicennia marina HOM05D002631 ORTHO05D002861 8.3e-10 68.9 146 35.6
Lj7A608T54 Lonicera japonica HOM05D002631 ORTHO05D002861 1.4e-09 68.2 139 35.3
Sed0001821 Sechium edule HOM05D002631 ORTHO05D002861 1.4e-09 68.2 135 39.3
TWI12G0788 Tripterygium wilfordii HOM05D002631 ORTHO05D002861 1.8e-09 67.8 135 41.5
Nn4g22361 Nelumbo nucifera HOM05D002631 ORTHO05D002861 2.4e-09 67.4 148 36.5
Nitab4.5_0000559g0430 Nicotiana tabacum HOM05D002631 ORTHO05D002861 4.1e-09 66.6 135 37.0
Sp3g00210 Schrenkiella parvula HOM05D002631 ORTHO05D002861 4.1e-09 66.6 116 38.8
CARHR075070 Cardamine hirsuta HOM05D002631 ORTHO05D002861 5.4e-09 66.2 126 42.1
vmacro18333 Vaccinium macrocarpon HOM05D002631 ORTHO05D002861 5.4e-09 66.2 139 34.5
Haze_12389 Corylus avellana HOM05D002631 ORTHO05D002861 7.0e-09 65.9 140 37.9
Migut.F00077 Erythranthe guttata HOM05D002631 ORTHO05D002861 7.0e-09 65.9 134 32.1
Oeu035217.1 Olea europaea HOM05D002631 ORTHO05D002861 9.2e-09 65.5 134 38.8
Cfa009334 Carpinus fangiana HOM05D002631 ORTHO05D002861 1.6e-08 64.7 149 36.9
MD17G1013900 Malus domestica HOM05D002631 ORTHO05D002861 1.6e-08 64.7 145 41.4
unitig_21.g20478 Utricularia gibba HOM05D001287 ORTHO05D001226 1.6e-08 64.7 140 35.7
Potri.008G176300 Populus trichocarpa HOM05D002631 ORTHO05D002861 3.5e-08 63.5 144 34.7
AL3G10270 Arabidopsis lyrata HOM05D002631 ORTHO05D002861 4.5e-08 63.2 126 35.7
CSS0020364 Camellia sinensis var. sinensis HOM05D002631 ORTHO05D002861 4.5e-08 63.2 151 31.8
PSO478G2931 Papaver somniferum HOM05D002631 ORTHO05D002861 4.5e-08 63.2 160 34.4
THA.LOC104805334 Tarenaya hassleriana HOM05D002631 ORTHO05D002861 4.5e-08 63.2 145 36.6
TAR629G0052 Trochodendron aralioides HOM05D002631 ORTHO05D002861 4.5e-08 63.2 148 36.5
Oeu013645.3 Olea europaea HOM05D000172 ORTHO05D000781 7.8e-08 62.4 148 35.8
Potri.010G058700 Populus trichocarpa HOM05D002631 ORTHO05D002861 7.8e-08 62.4 140 35.7
QL03p054083 Quercus lobata HOM05D002631 ORTHO05D002861 7.8e-08 62.4 134 36.6
MBI07_g31942_MAGBIO Magnolia biondii HOM05D002631 ORTHO05D002861 1.3e-07 61.6 148 35.1
Carub.0003s0021 Capsella rubella HOM05D002631 ORTHO05D002861 1.7e-07 61.2 126 39.7
ClCG05G013370 Citrullus lanatus HOM05D002631 ORTHO05D002861 1.7e-07 61.2 141 39.7
MD09G1013200 Malus domestica HOM05D002631 ORTHO05D002861 1.7e-07 61.2 154 36.4
Lalb_Chr02g0157791 Lupinus albus HOM05D002631 ORTHO05D002861 2.3e-07 60.8 138 39.1
TWI56G0933 Tripterygium wilfordii HOM05D002631 ORTHO05D002861 2.3e-07 60.8 130 34.6
Nitab4.5_0005161g0010 Nicotiana tabacum HOM05D002631 ORTHO05D002861 2.9e-07 60.5 135 36.3
Rhsim08G0043900 Rhododendron simsii HOM05D002631 ORTHO05D002861 2.9e-07 60.5 139 35.3
MSTRG.15564 Avicennia marina HOM05D002631 ORTHO05D002861 5.0e-07 59.7 145 32.4
Thhalv10004813m.g Eutrema salsugineum HOM05D002631 ORTHO05D002861 5.0e-07 59.7 145 38.6
QL03p053884 Quercus lobata HOM05D002631 ORTHO05D002861 5.0e-07 59.7 141 33.3
DCAR_015090 Daucus carota HOM05D002631 ORTHO05D002861 6.6e-07 59.3 129 34.9
Migut.K01455 Erythranthe guttata HOM05D002631 ORTHO05D002861 6.6e-07 59.3 122 37.7
HanXRQChr17g0550131 Helianthus annuus HOM05D002631 ORTHO05D002861 8.6e-07 58.9 116 37.1
THA.LOC104825613 Tarenaya hassleriana HOM05D002631 ORTHO05D002861 1.1e-06 58.5 126 35.7
Dinv33351 Davidia involucrata HOM05D000172 ORTHO05D000781 1.5e-06 58.2 65 46.2
Eucgr.B03472 Eucalyptus grandis HOM05D002631 ORTHO05D002861 2.5e-06 57.4 133 34.6
Peaxi162Scf00420g00049 Petunia axillaris HOM05D002631 ORTHO05D002861 2.5e-06 57.4 138 37.0
Sp2g16340 Schrenkiella parvula HOM05D002631 ORTHO05D002861 2.5e-06 57.4 136 34.6
Actinidia04441 Actinidia chinensis HOM05D002631 ORTHO05D002861 3.3e-06 57.0 160 33.1
BraA06t27065Z Brassica rapa HOM05D002631 ORTHO05D002861 3.3e-06 57.0 136 35.3
Ciclev10032698m.g Citrus clementina HOM05D002631 ORTHO05D002861 3.3e-06 57.0 139 31.7
Cc07_g00670 Coffea canephora HOM05D002631 ORTHO05D002861 4.3e-06 56.6 147 34.0
SalBow4G0924 Salvia bowleyana HOM05D002631 ORTHO05D002861 4.3e-06 56.6 137 29.9
SalBow4G2864 Salvia bowleyana HOM05D002631 ORTHO05D002861 4.3e-06 56.6 137 29.9
THA.LOC104821117 Tarenaya hassleriana HOM05D002631 ORTHO05D002861 5.6e-06 56.2 116 33.6
Aqoxy3G01502 Aquilegia oxysepala HOM05D002631 ORTHO05D002861 7.3e-06 55.8 146 34.2
HanXRQChr15g0474921 Helianthus annuus HOM05D002631 ORTHO05D002861 7.3e-06 55.8 131 35.1
GSVIVG01001809001 Vitis vinifera HOM05D002631 ORTHO05D002861 7.3e-06 55.8 62 53.2
CARHR148420 Cardamine hirsuta HOM05D002631 ORTHO05D002861 9.5e-06 55.5 135 37.8
Thhalv10021476m.g Eutrema salsugineum HOM05D002631 ORTHO05D002861 9.5e-06 55.5 124 35.5


User provided reference genes

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