Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.B4AV5R Arachis hypogaea HOM05D006319 ORTHO05D007963 9.0e-162 573.5 294 100.0
arahy.Tifrunner.gnm1.ann1.4SM61H Arachis hypogaea HOM05D006319 ORTHO05D007963 8.0e-126 454.1 243 95.9
arahy.Tifrunner.gnm1.ann1.7TU5G5 Arachis hypogaea HOM05D006319 ORTHO05D007963 8.0e-126 454.1 243 95.9
arahy.Tifrunner.gnm1.ann1.P5PFFU Arachis hypogaea HOM05D006319 ORTHO05D007963 2.3e-125 452.6 243 96.3
arahy.Tifrunner.gnm1.ann1.E0QW5U Arachis hypogaea HOM05D006319 ORTHO05D007963 2.3e-109 399.4 243 86.8
Glyma.06G156100 Glycine max HOM05D006319 ORTHO05D007963 5.4e-82 308.5 258 67.4
Lalb_Chr08g0238171 Lupinus albus HOM05D006319 ORTHO05D007963 2.8e-78 296.2 249 65.9
Phvul.009G154200 Phaseolus vulgaris HOM05D006319 ORTHO05D007963 2.8e-78 296.2 251 67.3
Glyma.04G209900 Glycine max HOM05D006319 ORTHO05D007963 1.1e-77 294.3 252 67.9
Medtr3g096750 Medicago truncatula HOM05D006319 ORTHO05D007963 8.9e-77 291.2 269 62.8
VMungo0464G0362 Vigna mungo HOM05D006319 ORTHO05D007963 1.2e-76 290.8 256 64.5
arahy.Tifrunner.gnm1.ann1.Q7YENP Arachis hypogaea HOM05D006319 ORTHO05D007963 7.6e-76 288.1 164 90.9
Psat5g060360 Pisum sativum HOM05D006319 ORTHO05D007963 1.3e-75 287.3 237 66.7
arahy.Tifrunner.gnm1.ann1.PNID9I Arachis hypogaea HOM05D006319 ORTHO05D007963 4.9e-75 285.4 154 94.2
Lj1g0009956 Lotus japonicus HOM05D006319 ORTHO05D007963 1.3e-72 277.3 246 63.8
arahy.Tifrunner.gnm1.ann1.949H7S Arachis hypogaea HOM05D006319 ORTHO05D007963 1.5e-71 273.9 159 91.2
RcHm_v2.0_Chr2g0122611 Rosa chinensis HOM05D006319 ORTHO05D007963 1.1e-69 267.7 239 61.9
arahy.Tifrunner.gnm1.ann1.GQG991 Arachis hypogaea HOM05D006319 ORTHO05D007963 7.6e-68 261.5 160 86.9
Dinv05221 Davidia involucrata HOM05D006319 ORTHO05D007963 8.4e-67 258.1 221 63.8
CsaV3_2G019570 Cucumis sativus L. HOM05D006319 ORTHO05D007963 1.1e-66 257.7 191 67.5
MELO3C023216.2 Cucumis melo HOM05D006319 ORTHO05D007963 1.9e-66 256.9 201 66.2
Prupe.4G276300 Prunus persica HOM05D006319 ORTHO05D007963 7.1e-66 255.0 241 59.8
Eucgr.H05122 Eucalyptus grandis HOM05D006319 ORTHO05D007963 1.2e-65 254.2 247 57.1
Manes.12G159300 Manihot esculenta HOM05D006319 ORTHO05D007963 1.6e-65 253.8 249 56.2
ClCG02G000280 Citrullus lanatus HOM05D005757 ORTHO05D007090 2.7e-65 253.1 225 60.0
Potri.007G100800 Populus trichocarpa HOM05D006319 ORTHO05D007963 2.7e-65 253.1 256 57.0
FAN23G2801 Fragaria x ananassa HOM05D006319 ORTHO05D007963 3.5e-65 252.7 240 57.9
Hma1.2p1_0236F.1_g099250 Hydrangea macrophylla HOM05D006319 ORTHO05D007963 4.6e-65 252.3 223 62.8
CSS0021790 Camellia sinensis var. sinensis HOM05D006319 ORTHO05D007963 1.3e-64 250.8 224 61.2
QL10p041175 Quercus lobata HOM05D006319 ORTHO05D007963 1.3e-64 250.8 275 52.7
FvH4_1g24980 Fragaria vesca HOM05D006319 ORTHO05D007963 3.0e-64 249.6 242 57.9
Aqoxy6G00315 Aquilegia oxysepala HOM05D006319 ORTHO05D007963 3.9e-64 249.2 199 63.8
TWI31G0926 Tripterygium wilfordii HOM05D006319 ORTHO05D007963 3.9e-64 249.2 238 60.1
vmacro18688 Vaccinium macrocarpon HOM05D006319 ORTHO05D007963 2.5e-63 246.5 258 54.7
CiPaw.04G079200 Carya illinoinensis HOM05D006319 ORTHO05D007963 4.3e-63 245.7 208 63.5
Ciclev10002322m.g Citrus clementina HOM05D006319 ORTHO05D007963 4.3e-63 245.7 251 57.4
Duzib187G0662 Durio zibethinus HOM05D006319 ORTHO05D007963 9.6e-63 244.6 249 56.2
FAN19G2853 Fragaria x ananassa HOM05D006319 ORTHO05D007963 1.6e-62 243.8 257 54.9
Atru.chr4.1000 Acer truncatum HOM05D006319 ORTHO05D007963 2.1e-62 243.4 244 54.9
FAN28G2219 Fragaria x ananassa HOM05D006319 ORTHO05D007963 2.1e-62 243.4 258 54.3
Actinidia16521 Actinidia chinensis HOM05D006319 ORTHO05D007963 3.6e-62 242.7 220 59.1
Lj7A582T32 Lonicera japonica HOM05D006319 ORTHO05D007963 6.2e-62 241.9 164 73.2
GSVIVG01022331001 Vitis vinifera HOM05D006319 ORTHO05D007963 8.1e-62 241.5 196 64.8
Thecc.01G138200 Theobroma cacao HOM05D006319 ORTHO05D007963 1.1e-61 241.1 248 55.2
MD01G1000300 Malus domestica HOM05D006319 ORTHO05D007963 1.4e-61 240.7 197 64.5
CANSAT01G1475 Cannabis sativa HOM05D006319 ORTHO05D007963 1.8e-61 240.4 191 67.5
COL.COLO4_35821 Corchorus olitorius HOM05D006319 ORTHO05D007963 2.4e-61 240.0 159 71.7
Gorai.011G118400 Gossypium raimondii HOM05D006319 ORTHO05D007963 4.0e-61 239.2 270 50.4
QL10p041464 Quercus lobata HOM05D006319 ORTHO05D007963 4.0e-61 239.2 159 71.7
Nn1g08971 Nelumbo nucifera HOM05D006319 ORTHO05D007963 6.9e-61 238.4 191 64.4
DCAR_009594 Daucus carota HOM05D006319 ORTHO05D007963 9.0e-61 238.0 157 73.2
PGR102G0633 Punica granatum HOM05D006319 ORTHO05D007963 1.5e-60 237.3 195 64.1
Oeu011026.1 Olea europaea HOM05D006319 ORTHO05D007963 2.6e-60 236.5 159 71.7
Hund07232 Selenicereus undatus HOM05D006319 ORTHO05D007963 3.4e-60 236.1 241 55.6
MSTRG.23490 Avicennia marina HOM05D006319 ORTHO05D007963 4.5e-60 235.7 156 71.8
BcaB01g03112 Brassica carinata HOM05D006319 ORTHO05D007963 4.5e-60 235.7 199 59.8
Carub.0004s0957 Capsella rubella HOM05D006319 ORTHO05D007963 5.8e-60 235.3 233 55.4
Migut.H00824 Erythranthe guttata HOM05D006319 ORTHO05D007963 1.7e-59 233.8 204 59.8
Sopen04g004550 Solanum pennellii HOM05D006319 ORTHO05D007963 1.7e-59 233.8 194 64.4
PGSC0003DMG400032538 Solanum tuberosum HOM05D006319 ORTHO05D007963 1.7e-59 233.8 196 63.8
CAN.G186.2 Capsicum annuum HOM05D006319 ORTHO05D007963 4.9e-59 232.3 247 54.7
Nitab4.5_0004105g0090 Nicotiana tabacum HOM05D006319 ORTHO05D007963 6.4e-59 231.9 213 59.6
AUR62000524 Chenopodium quinoa HOM05D006319 ORTHO05D007963 1.1e-58 231.1 212 59.9
Nitab4.5_0013462g0010 Nicotiana tabacum HOM05D006319 ORTHO05D007963 1.1e-58 231.1 211 60.7
Solyc04g009420.3 Solanum lycopersicum HOM05D006319 ORTHO05D007963 1.9e-58 230.3 228 56.6
AL4G23100 Arabidopsis lyrata HOM05D006319 ORTHO05D007963 2.4e-58 229.9 229 55.9
Sp4g11430 Schrenkiella parvula HOM05D006319 ORTHO05D007963 3.2e-58 229.6 197 58.9
BcaC01g04984 Brassica carinata HOM05D006319 ORTHO05D007963 4.2e-58 229.2 200 60.0
TAR628G0979 Trochodendron aralioides HOM05D006319 ORTHO05D007963 4.2e-58 229.2 292 46.6
Aa31LG5G7620 Aethionema arabicum HOM05D005759 ORTHO05D007172 5.4e-58 228.8 199 61.3
BcaB06g28232 Brassica carinata HOM05D006319 ORTHO05D007963 5.4e-58 228.8 225 55.1
A03p26290 Brassica napus HOM05D006319 ORTHO05D007963 5.4e-58 228.8 204 57.8
Thhalv10017176m.g Eutrema salsugineum HOM05D006319 ORTHO05D007963 7.1e-58 228.4 198 59.6
EL10Ac4g09632 Beta vulgaris HOM05D006319 ORTHO05D007963 1.2e-57 227.6 229 57.2
Sc02g0003550 Simmondsia chinensis HOM05D006319 ORTHO05D007963 1.2e-57 227.6 192 59.9
AUR62006869 Chenopodium quinoa HOM05D006319 ORTHO05D007963 1.6e-57 227.3 199 60.8
AT2G28605 Arabidopsis thaliana HOM05D006319 ORTHO05D007963 2.7e-57 226.5 225 56.9
BcaC02g08157 Brassica carinata HOM05D006319 ORTHO05D007963 3.5e-57 226.1 238 52.9
C04p57790 Brassica napus HOM05D006319 ORTHO05D007963 3.5e-57 226.1 238 52.9
BraA03t11843Z Brassica rapa HOM05D006319 ORTHO05D007963 3.5e-57 226.1 204 57.4
CARHR121630 Cardamine hirsuta HOM05D006319 ORTHO05D007963 3.5e-57 226.1 218 56.4
PSO782G1065 Papaver somniferum HOM05D006319 ORTHO05D007963 3.5e-57 226.1 179 64.8
BolC4t27297H Brassica oleracea HOM05D006319 ORTHO05D007963 4.6e-57 225.7 238 52.5
Cc02_g33910 Coffea canephora HOM05D006319 ORTHO05D007963 4.6e-57 225.7 225 57.8
Cpa.g.sc37.12 Carica papaya HOM05D006319 ORTHO05D007963 6.0e-57 225.3 273 48.4
A04p21670 Brassica napus HOM05D006319 ORTHO05D007963 1.0e-56 224.6 233 53.2
BraA04t17731Z Brassica rapa HOM05D006319 ORTHO05D007963 1.3e-56 224.2 233 52.8
ECA246G1987 Erigeron canadensis HOM05D000001 ORTHO05D000003 1.8e-56 223.8 212 56.1
unitig_899.g15151 Utricularia gibba HOM05D006319 ORTHO05D007963 1.8e-56 223.8 166 64.5
C03p31420 Brassica napus HOM05D006319 ORTHO05D007963 2.3e-56 223.4 189 61.4
MBI06_g35206_MAGBIO Magnolia biondii HOM05D006319 ORTHO05D007963 3.9e-56 222.6 197 59.4
SalBow1G4836 Salvia bowleyana HOM05D006319 ORTHO05D007963 8.7e-56 221.5 157 68.2
THA.LOC104826346 Tarenaya hassleriana HOM05D006319 ORTHO05D007963 1.5e-55 220.7 156 66.0
BolC3t15489H Brassica oleracea HOM05D006319 ORTHO05D007963 1.6e-54 217.2 163 65.6
CDE08G0565 Ceratophyllum demersum HOM05D006319 ORTHO05D007963 1.6e-54 217.2 193 58.5
Zm00001eb422700 Zea mays HOM05D006319 ORTHO05D007963 2.8e-54 216.5 157 66.9
HanXRQChr12g0378071 Helianthus annuus HOM05D006319 ORTHO05D007963 6.2e-54 215.3 199 58.8
Ah.06g191080 Amaranthus hybridus HOM05D006319 ORTHO05D007963 8.1e-54 214.9 215 56.3
SGA_v2.0_scaffold273G46467 Striga asiatica HOM05D006319 ORTHO05D007963 1.1e-53 214.5 194 58.8
HPP92_009279 Vanilla planifolia HOM05D006319 ORTHO05D007963 5.3e-53 212.2 189 60.3
ATR0584G200 Amborella trichopoda HOM05D006319 ORTHO05D007963 1.7e-51 207.2 156 66.0
Eucgr.H02106 Eucalyptus grandis HOM05D006319 ORTHO05D007963 1.7e-51 207.2 247 51.8
Peaxi162Scf00842g00214 Petunia axillaris HOM05D006319 ORTHO05D007963 1.6e-49 200.7 137 70.8
SEGI_06099 Sequoiadendron giganteum HOM05D006319 ORTHO05D007963 1.1e-47 194.5 167 56.9
SEGI_37383 Sequoiadendron giganteum HOM05D006319 ORTHO05D007963 1.9e-47 193.7 163 57.7
Potri.005G068500 Populus trichocarpa HOM05D006319 ORTHO05D007963 7.1e-42 175.3 242 47.1
Rhsim01G0141500 Rhododendron simsii HOM05D006319 ORTHO05D007963 1.8e-40 170.6 185 49.2
arahy.Tifrunner.gnm1.ann1.DSS8KU Arachis hypogaea HOM05D006319 ORTHO05D007963 2.3e-40 170.2 99 86.9
Lsat_1_v5_gn_5_34560 Lactuca sativa HOM05D006319 ORTHO05D007963 2.3e-40 170.2 183 53.6
Pp3c8_18060 Physcomitrium patens HOM05D006319 ORTHO05D007963 8.7e-40 168.3 158 54.4
AagrBONN_evm.TU.Sc2ySwM_228.2950 Anthoceros agrestis HOM05D006319 ORTHO05D007963 1.5e-39 167.5 181 48.1
TPR.G33590 Trifolium pratense HOM05D001650 ORTHO05D001592 3.1e-37 159.8 163 59.5
Ca_16986_v3 Cicer arietinum L. HOM05D001650 ORTHO05D001592 2.6e-36 156.8 94 83.0
arahy.Tifrunner.gnm1.ann1.RE08FE Arachis hypogaea HOM05D006319 ORTHO05D007963 1.2e-33 147.9 128 69.5
Mapoly0092s0018 Marchantia polymorpha HOM05D006319 ORTHO05D007963 1.3e-30 137.9 160 46.2
Gohir.D10G108000 Gossypium hirsutum HOM05D006319 ORTHO05D007963 2.8e-30 136.7 270 36.3
Gohir.A10G068160 Gossypium hirsutum HOM05D006319 ORTHO05D007963 1.4e-29 134.4 230 38.7
CBR_g49982 Chara braunii HOM05D006319 ORTHO05D007963 9.1e-29 131.7 134 50.0
TPR.G10777 Trifolium pratense HOM05D006319 ORTHO05D007963 2.6e-28 130.2 82 74.4
SMO117G0258 Selaginella moellendorffii HOM05D006319 ORTHO05D007963 5.0e-27 125.9 158 40.5
FAN23G0464 Fragaria x ananassa HOM05D006319 ORTHO05D007963 8.5e-27 125.2 92 66.3
Cre16.g678851 Chlamydomonas reinhardtii HOM05D006319 ORTHO05D007963 4.2e-26 122.9 156 41.7
FAN26G1803 Fragaria x ananassa HOM05D001650 ORTHO05D001592 4.2e-26 122.9 116 58.6
Manes.12G147800 Manihot esculenta HOM05D006319 ORTHO05D007963 2.2e-22 110.5 113 55.8
arahy.Tifrunner.gnm1.ann1.I50TU7 Arachis hypogaea HOM05D006319 ORTHO05D007963 2.8e-22 110.2 109 56.9
AagrBONN_evm.TU.Sc2ySwM_362.516 Anthoceros agrestis HOM05D005157 ORTHO05D006652 1.4e-21 107.8 118 51.7
Os04g0434900 Oryza sativa ssp. japonica HOM05D006319 ORTHO05D007963 4.5e-20 102.8 69 69.6
MCO01G211 Micromonas commoda HOM05D006319 ORTHO05D007963 9.7e-15 85.1 169 32.5
CDE08G0611 Ceratophyllum demersum HOM05D006319 ORTHO05D007963 2.6e-12 77.0 92 52.2
PRCOL_00004434 Prasinoderma coloniale HOM05D006319 ORTHO05D007963 3.5e-12 76.6 118 39.8
MBI17_g01556_MAGBIO Magnolia biondii HOM05D006319 ORTHO05D007963 1.6e-09 67.8 151 36.4
MBI11_g02539_MAGBIO Magnolia biondii HOM05D006319 ORTHO05D007963 7.5e-07 58.9 90 43.3
Peaxi162Scf01223g00010 Petunia axillaris HOM05D002933 ORTHO05D007742 2.8e-06 57.0 122 31.1
arahy.Tifrunner.gnm1.ann1.ZNCF9E Arachis hypogaea HOM05D010338 ORTHO05D084070 3.7e-06 56.6 32 87.5


User provided reference genes

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