Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.B45DAM Arachis hypogaea HOM05D000163 ORTHO05D000962 1.9e-34 148.7 77 100.0
arahy.Tifrunner.gnm1.ann1.Z8IK7E Arachis hypogaea HOM05D000163 ORTHO05D000962 4.6e-33 144.1 76 96.1
arahy.Tifrunner.gnm1.ann1.ZH3B41 Arachis hypogaea HOM05D000163 ORTHO05D000962 6.7e-16 87.0 42 95.2
arahy.Tifrunner.gnm1.ann1.J1FRWC Arachis hypogaea HOM05D000246 ORTHO05D005396 1.5e-15 85.9 41 97.6
arahy.Tifrunner.gnm1.ann1.8L3F9C Arachis hypogaea HOM05D000746 ORTHO05D000573 1.3e-14 82.8 148 40.5
arahy.Tifrunner.gnm1.ann1.Y96K7L Arachis hypogaea HOM05D007370 ORTHO05D009394 2.2e-14 82.0 66 62.1
arahy.Tifrunner.gnm1.ann1.4J5UF2 Arachis hypogaea HOM05D000163 ORTHO05D000962 2.8e-14 81.6 42 90.5
Prupe.2G170900 Prunus persica HOM05D000163 ORTHO05D000962 1.6e-09 65.9 42 76.2
TPR.G10317 Trifolium pratense HOM05D000163 ORTHO05D000962 3.6e-09 64.7 42 73.8
Ca_23630_v3 Cicer arietinum L. HOM05D000163 ORTHO05D000962 1.0e-08 63.2 68 52.9
Medtr8g030690 Medicago truncatula HOM05D000163 ORTHO05D000962 1.0e-08 63.2 52 59.6
Lj3g0022452 Lotus japonicus HOM05D000163 ORTHO05D000962 1.4e-08 62.8 42 76.2
Glyma.03G008800 Glycine max HOM05D000163 ORTHO05D000962 3.0e-08 61.6 42 71.4
MD01G1061400 Malus domestica HOM05D000163 ORTHO05D000962 3.9e-08 61.2 51 58.8
FAN01G1922 Fragaria x ananassa HOM05D000163 ORTHO05D000962 5.1e-08 60.8 60 51.7
FAN10G2151 Fragaria x ananassa HOM05D000163 ORTHO05D000962 6.7e-08 60.5 60 51.7
FAN10G2422 Fragaria x ananassa HOM05D000163 ORTHO05D000962 6.7e-08 60.5 60 51.7
QL08p048359 Quercus lobata HOM05D000163 ORTHO05D000962 6.7e-08 60.5 42 69.0
FvH4_7g14340 Fragaria vesca HOM05D000163 ORTHO05D000962 8.8e-08 60.1 60 51.7
FAN06G1246 Fragaria x ananassa HOM05D000163 ORTHO05D000962 8.8e-08 60.1 60 51.7
FAN06G4853 Fragaria x ananassa HOM05D000163 ORTHO05D000962 8.8e-08 60.1 60 51.7
Lalb_Chr10g0096901 Lupinus albus HOM05D000163 ORTHO05D000962 8.8e-08 60.1 51 56.9
RcHm_v2.0_Chr1g0355361 Rosa chinensis HOM05D000163 ORTHO05D000962 1.1e-07 59.7 51 58.8
VMungo1383G3455 Vigna mungo HOM05D000163 ORTHO05D000962 1.1e-07 59.7 51 54.9
Phvul.008G062200 Phaseolus vulgaris HOM05D000163 ORTHO05D000962 2.0e-07 58.9 51 54.9
Glyma.09G259100 Glycine max HOM05D000163 ORTHO05D000962 2.6e-07 58.5 42 69.0
arahy.Tifrunner.gnm1.ann1.C0Y0G1 Arachis hypogaea HOM05D000746 ORTHO05D000573 3.3e-07 58.2 34 91.2
arahy.Tifrunner.gnm1.ann1.H0Z6HL Arachis hypogaea HOM05D000746 ORTHO05D000573 3.3e-07 58.2 34 91.2
Glyma.07G070300 Glycine max HOM05D000163 ORTHO05D000962 3.3e-07 58.2 65 49.2
Glyma.18G233500 Glycine max HOM05D000163 ORTHO05D000962 3.3e-07 58.2 51 56.9
CiPaw.02G031500 Carya illinoinensis HOM05D000163 ORTHO05D000962 4.4e-07 57.8 42 69.0
FAN03G3345 Fragaria x ananassa HOM05D000163 ORTHO05D000962 4.4e-07 57.8 60 50.0
Psat4g155960 Pisum sativum HOM05D000163 ORTHO05D000962 5.7e-07 57.4 66 47.0
CANSAT56G2922 Cannabis sativa HOM05D000163 ORTHO05D000962 7.4e-07 57.0 42 64.3
Lalb_Chr17g0339571 Lupinus albus HOM05D000163 ORTHO05D000962 1.7e-06 55.8 51 52.9
CiPaw.01G062000 Carya illinoinensis HOM05D000163 ORTHO05D000962 2.2e-06 55.5 40 67.5
Phvul.010G099400 Phaseolus vulgaris HOM05D000163 ORTHO05D000962 2.2e-06 55.5 42 66.7
THA.LOC104817292 Tarenaya hassleriana HOM05D000163 ORTHO05D000962 2.2e-06 55.5 51 51.0
MD07G1136700 Malus domestica HOM05D000163 ORTHO05D000962 2.8e-06 55.1 42 61.9
TWI59G0515 Tripterygium wilfordii HOM05D000163 ORTHO05D000962 2.8e-06 55.1 42 59.5
Medtr7g077780 Medicago truncatula HOM05D000163 ORTHO05D000962 3.7e-06 54.7 51 54.9
Haze_15517 Corylus avellana HOM05D000163 ORTHO05D000962 4.8e-06 54.3 51 52.9
THA.LOC104802032 Tarenaya hassleriana HOM05D000163 ORTHO05D000962 4.8e-06 54.3 75 38.7
ClCG06G003660 Citrullus lanatus HOM05D000163 ORTHO05D000962 6.3e-06 53.9 41 63.4
Psat3g108160 Pisum sativum HOM05D000163 ORTHO05D000962 6.3e-06 53.9 42 64.3
TPR.G37712 Trifolium pratense HOM05D000163 ORTHO05D000962 6.3e-06 53.9 42 66.7
Cfa003922 Carpinus fangiana HOM05D000163 ORTHO05D000962 8.2e-06 53.5 73 43.8


User provided reference genes

Program Settings