Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.B2ZTLF Arachis hypogaea HOM05D000913 ORTHO05D000687 2.3e-57 225.7 145 100.0
arahy.Tifrunner.gnm1.ann1.M08FD2 Arachis hypogaea HOM05D000913 ORTHO05D000687 3.2e-51 205.3 146 90.4
Lj2g0027181 Lotus japonicus HOM05D000913 ORTHO05D000687 2.4e-14 82.8 80 58.8
Lalb_Chr22g0353261 Lupinus albus HOM05D000913 ORTHO05D000687 6.9e-14 81.3 80 57.5
Lalb_Chr22g0353251 Lupinus albus HOM05D000913 ORTHO05D000687 9.0e-14 80.9 78 57.7
TPR.G31615 Trifolium pratense HOM05D000913 ORTHO05D000687 2.6e-13 79.3 71 62.0
Medtr6g082180 Medicago truncatula HOM05D000913 ORTHO05D000687 3.4e-13 79.0 70 62.9
Psat0s172g0040 Pisum sativum HOM05D000913 ORTHO05D000687 7.7e-13 77.8 69 63.8
SalBow8G4938 Salvia bowleyana HOM05D000913 ORTHO05D000687 2.2e-12 76.3 79 54.4
arahy.Tifrunner.gnm1.ann1.IVAP43 Arachis hypogaea HOM05D000913 ORTHO05D000687 3.8e-12 75.5 79 53.2
arahy.Tifrunner.gnm1.ann1.EN7GHH Arachis hypogaea HOM05D000913 ORTHO05D000687 5.0e-12 75.1 79 51.9
arahy.Tifrunner.gnm1.ann1.JV1GEI Arachis hypogaea HOM05D000913 ORTHO05D000687 5.0e-12 75.1 79 51.9
SalBow8G3675 Salvia bowleyana HOM05D000913 ORTHO05D000687 6.5e-12 74.7 76 55.3
arahy.Tifrunner.gnm1.ann1.S87WCM Arachis hypogaea HOM05D000913 ORTHO05D000687 1.1e-11 73.9 79 51.9
A05p40590 Brassica napus HOM05D000913 ORTHO05D000687 2.5e-11 72.8 79 48.1
BraA05t22790Z Brassica rapa HOM05D000913 ORTHO05D000687 2.5e-11 72.8 79 48.1
SalBow8G4274 Salvia bowleyana HOM05D000913 ORTHO05D000687 2.5e-11 72.8 76 52.6
SalBow8G4609 Salvia bowleyana HOM05D000913 ORTHO05D000687 2.5e-11 72.8 76 52.6
Oeu049442.1 Olea europaea HOM05D000913 ORTHO05D000687 3.2e-11 72.4 74 48.6
arahy.Tifrunner.gnm1.ann1.29G5I6 Arachis hypogaea HOM05D000913 ORTHO05D000687 4.2e-11 72.0 80 52.5
Phvul.004G153100 Phaseolus vulgaris HOM05D000913 ORTHO05D000687 4.2e-11 72.0 72 55.6
SalBow8G5506 Salvia bowleyana HOM05D000913 ORTHO05D000687 4.2e-11 72.0 74 52.7
Medtr6g082190 Medicago truncatula HOM05D000913 ORTHO05D000687 5.5e-11 71.6 65 63.1
Migut.M01600 Erythranthe guttata HOM05D000913 ORTHO05D000687 7.2e-11 71.2 75 52.0
Psat0s172g0120 Pisum sativum HOM05D000913 ORTHO05D000687 7.2e-11 71.2 65 61.5
arahy.Tifrunner.gnm1.ann1.HRA598 Arachis hypogaea HOM05D000913 ORTHO05D000687 9.4e-11 70.9 80 52.5
MD03G1038900 Malus domestica HOM05D000913 ORTHO05D000687 2.1e-10 69.7 76 52.6
TPR.G17672 Trifolium pratense HOM05D000913 ORTHO05D000687 2.7e-10 69.3 70 55.7
Oeu049450.1 Olea europaea HOM05D000913 ORTHO05D000687 4.6e-10 68.6 73 46.6
Duzib268G1294 Durio zibethinus HOM05D000913 ORTHO05D000687 6.1e-10 68.2 80 48.8
Glyma.09G179800 Glycine max HOM05D000913 ORTHO05D000687 7.9e-10 67.8 80 51.2
Medtr5g084660 Medicago truncatula HOM05D000913 ORTHO05D000687 7.9e-10 67.8 71 54.9
MD03G1038400 Malus domestica HOM05D000913 ORTHO05D000687 1.0e-09 67.4 76 50.0
arahy.Tifrunner.gnm1.ann1.U821IZ Arachis hypogaea HOM05D000913 ORTHO05D000687 1.8e-09 66.6 74 51.4
Prupe.6G030200 Prunus persica HOM05D000913 ORTHO05D000687 1.8e-09 66.6 80 48.8
CARHR082300 Cardamine hirsuta HOM05D000913 ORTHO05D000687 3.0e-09 65.9 79 44.3
Haze_09888 Corylus avellana HOM05D000913 ORTHO05D000687 3.0e-09 65.9 77 46.8
Medtr6g082280 Medicago truncatula HOM05D000913 ORTHO05D000687 3.0e-09 65.9 80 52.5
Phvul.008G282300 Phaseolus vulgaris HOM05D000913 ORTHO05D000687 3.0e-09 65.9 78 50.0
BcaB03g14690 Brassica carinata HOM05D000913 ORTHO05D000687 3.9e-09 65.5 79 43.0
CiPaw.11G208300 Carya illinoinensis HOM05D000913 ORTHO05D000687 3.9e-09 65.5 76 48.7
Oeu049439.1 Olea europaea HOM05D000913 ORTHO05D000687 6.7e-09 64.7 76 48.7
MD11G1039300 Malus domestica HOM05D000913 ORTHO05D000687 8.8e-09 64.3 79 48.1
Manes.03G137300 Manihot esculenta HOM05D000913 ORTHO05D000687 8.8e-09 64.3 76 53.9
Medtr6g082330 Medicago truncatula HOM05D000913 ORTHO05D000687 8.8e-09 64.3 75 54.7
AL8G14310 Arabidopsis lyrata HOM05D000913 ORTHO05D000687 1.1e-08 63.9 80 43.8
CARHR184000 Cardamine hirsuta HOM05D000913 ORTHO05D000687 1.1e-08 63.9 78 44.9
Prupe.6G030300 Prunus persica HOM05D000913 ORTHO05D000687 1.1e-08 63.9 80 47.5
arahy.Tifrunner.gnm1.ann1.E2IRB4 Arachis hypogaea HOM05D000913 ORTHO05D000687 1.5e-08 63.5 74 48.6
A03p35370 Brassica napus HOM05D000913 ORTHO05D000687 1.5e-08 63.5 79 41.8
BolC3t16566H Brassica oleracea HOM05D000913 ORTHO05D000687 1.5e-08 63.5 79 41.8
BraA03t12715Z Brassica rapa HOM05D000913 ORTHO05D000687 1.5e-08 63.5 79 41.8
Manes.11G055424 Manihot esculenta HOM05D000913 ORTHO05D000687 1.5e-08 63.5 80 50.0
Nn1g07601 Nelumbo nucifera HOM05D000913 ORTHO05D000687 1.5e-08 63.5 79 49.4
Aa31LG5G18190 Aethionema arabicum HOM05D000913 ORTHO05D000687 2.0e-08 63.2 76 44.7
BcaC01g04273 Brassica carinata HOM05D000913 ORTHO05D000687 2.0e-08 63.2 78 42.3
C03p42980 Brassica napus HOM05D000913 ORTHO05D000687 2.0e-08 63.2 78 42.3
Manes.11G060024 Manihot esculenta HOM05D000913 ORTHO05D000687 2.0e-08 63.2 76 52.6
CANSAT11G0550 Cannabis sativa HOM05D000913 ORTHO05D000687 2.5e-08 62.8 75 49.3
CiPaw.14G082800 Carya illinoinensis HOM05D000913 ORTHO05D000687 2.5e-08 62.8 75 48.0
Glyma.07G098500 Glycine max HOM05D000913 ORTHO05D000687 2.5e-08 62.8 75 52.0
Glyma.14G051600 Glycine max HOM05D000913 ORTHO05D000687 2.5e-08 62.8 69 47.8
Oeu049436.1 Olea europaea HOM05D000913 ORTHO05D000687 2.5e-08 62.8 76 46.1
QL05p005810 Quercus lobata HOM05D000913 ORTHO05D000687 2.5e-08 62.8 80 47.5
arahy.Tifrunner.gnm1.ann1.J75ZHQ Arachis hypogaea HOM05D000913 ORTHO05D000687 3.3e-08 62.4 80 50.0
A06p39280 Brassica napus HOM05D000913 ORTHO05D000687 3.3e-08 62.4 79 43.0
Lalb_Chr04g0250241 Lupinus albus HOM05D000913 ORTHO05D000687 3.3e-08 62.4 70 47.1
Manes.11G060239 Manihot esculenta HOM05D000913 ORTHO05D000687 3.3e-08 62.4 80 50.0
arahy.Tifrunner.gnm1.ann1.FE2NQF Arachis hypogaea HOM05D000913 ORTHO05D000687 4.3e-08 62.0 80 50.0
CiPaw.01G191500 Carya illinoinensis HOM05D000913 ORTHO05D000687 4.3e-08 62.0 78 47.4
Thhalv10021695m.g Eutrema salsugineum HOM05D000913 ORTHO05D000687 4.3e-08 62.0 79 41.8
RcHm_v2.0_Chr5g0075281 Rosa chinensis HOM05D000913 ORTHO05D000687 4.3e-08 62.0 79 45.6
THA.LOC104822446 Tarenaya hassleriana HOM05D000913 ORTHO05D000687 4.3e-08 62.0 79 40.5
BolC1t05541H Brassica oleracea HOM05D000191 ORTHO05D000122 5.7e-08 61.6 78 43.6
Thecc.07G019800 Theobroma cacao HOM05D000913 ORTHO05D000687 5.7e-08 61.6 75 45.3
BcaB04g21280 Brassica carinata HOM05D000913 ORTHO05D000687 7.4e-08 61.2 78 43.6
BraA01t04371Z Brassica rapa HOM05D000191 ORTHO05D000122 7.4e-08 61.2 76 44.7
Carub.0003s0717 Capsella rubella HOM05D000913 ORTHO05D000687 7.4e-08 61.2 79 44.3
Carub.0008s0784 Capsella rubella HOM05D000913 ORTHO05D000687 7.4e-08 61.2 80 41.2
AL8G21010 Arabidopsis lyrata HOM05D000913 ORTHO05D000687 9.7e-08 60.8 79 43.0
AT3G07600 Arabidopsis thaliana HOM05D000913 ORTHO05D000687 9.7e-08 60.8 79 41.8
Duzib213G0636 Durio zibethinus HOM05D000913 ORTHO05D000687 9.7e-08 60.8 80 40.0
FvH4_3g42100 Fragaria vesca HOM05D000913 ORTHO05D000687 9.7e-08 60.8 72 44.4
QL05p004858 Quercus lobata HOM05D000913 ORTHO05D000687 9.7e-08 60.8 80 43.8
AL3G18960 Arabidopsis lyrata HOM05D000913 ORTHO05D000687 1.3e-07 60.5 79 41.8
Haze_09880 Corylus avellana HOM05D000913 ORTHO05D000687 1.3e-07 60.5 75 46.7
MD03G1039100 Malus domestica HOM05D000913 ORTHO05D000687 1.3e-07 60.5 78 47.4
Nn5g28779 Nelumbo nucifera HOM05D000913 ORTHO05D000687 1.3e-07 60.5 77 45.5
Nn5g28781 Nelumbo nucifera HOM05D000913 ORTHO05D000687 1.3e-07 60.5 77 45.5
Prupe.6G030400 Prunus persica HOM05D000913 ORTHO05D000687 1.3e-07 60.5 79 46.8
Aqoxy4G01749 Aquilegia oxysepala HOM05D000913 ORTHO05D000687 1.7e-07 60.1 80 41.2
Cpa.g.sc12.187 Carica papaya HOM05D000913 ORTHO05D000687 1.7e-07 60.1 80 47.5
FAN16G2023 Fragaria x ananassa HOM05D000913 ORTHO05D000687 1.7e-07 60.1 79 45.6
Gorai.009G446400 Gossypium raimondii HOM05D000913 ORTHO05D000687 1.7e-07 60.1 85 44.7
RcHm_v2.0_Chr5g0075291 Rosa chinensis HOM05D000913 ORTHO05D000687 1.7e-07 60.1 79 43.0
VMungo0647G1502 Vigna mungo HOM05D000913 ORTHO05D000687 1.7e-07 60.1 69 46.4
Cpa.g.sc12.95 Carica papaya HOM05D000913 ORTHO05D000687 2.2e-07 59.7 80 43.8
FAN21G3003 Fragaria x ananassa HOM05D000913 ORTHO05D000687 2.2e-07 59.7 79 45.6
Nitab4.5_0000134g0080 Nicotiana tabacum HOM05D000913 ORTHO05D000687 2.2e-07 59.7 79 43.0
Prupe.6G030500 Prunus persica HOM05D000913 ORTHO05D000687 2.2e-07 59.7 70 48.6
AT5G48290 Arabidopsis thaliana HOM05D000913 ORTHO05D000687 2.8e-07 59.3 79 43.0
Duzib268G0517 Durio zibethinus HOM05D000913 ORTHO05D000687 2.8e-07 59.3 76 44.7
FvH4_3g42050 Fragaria vesca HOM05D000913 ORTHO05D000687 2.8e-07 59.3 79 45.6
FAN16G3426 Fragaria x ananassa HOM05D000913 ORTHO05D000687 2.8e-07 59.3 78 43.6
Nn1g06060 Nelumbo nucifera HOM05D000913 ORTHO05D000687 2.8e-07 59.3 75 46.7
Atru.chr2.3866 Acer truncatum HOM05D000913 ORTHO05D000687 3.7e-07 58.9 71 50.7
COL.COLO4_09796 Corchorus olitorius HOM05D000913 ORTHO05D000687 3.7e-07 58.9 79 43.0
FvH4_3g42060 Fragaria vesca HOM05D000913 ORTHO05D000687 3.7e-07 58.9 79 43.0
Hma1.2p1_0048F.1_g028140 Hydrangea macrophylla HOM05D000913 ORTHO05D000687 3.7e-07 58.9 75 48.0
LjContig00029g0025163 Lotus japonicus HOM05D000913 ORTHO05D000687 3.7e-07 58.9 76 44.7
CSS0038172 Camellia sinensis var. sinensis HOM05D000913 ORTHO05D000687 4.8e-07 58.5 80 45.0
Migut.E01774 Erythranthe guttata HOM05D000913 ORTHO05D000687 4.8e-07 58.5 80 46.2
MD11G1039200 Malus domestica HOM05D000913 ORTHO05D000687 4.8e-07 58.5 75 48.0
QL05p004788 Quercus lobata HOM05D000913 ORTHO05D000687 4.8e-07 58.5 80 45.0
THA.LOC104815685 Tarenaya hassleriana HOM05D011788 ORTHO05D000687 4.8e-07 58.5 77 45.5
CiPaw.11G201200 Carya illinoinensis HOM05D000913 ORTHO05D000687 6.3e-07 58.2 80 47.5
DCAR_017594 Daucus carota HOM05D000913 ORTHO05D000687 6.3e-07 58.2 72 47.2
Gohir.A04G008700 Gossypium hirsutum HOM05D000913 ORTHO05D000687 6.3e-07 58.2 77 44.2
VMungo0464G1890 Vigna mungo HOM05D000913 ORTHO05D000687 6.3e-07 58.2 65 52.3
Zm00001eb080170 Zea mays HOM05D000913 ORTHO05D000687 6.3e-07 58.2 76 48.7
Dinv16085 Davidia involucrata HOM05D000913 ORTHO05D000687 8.2e-07 57.8 80 45.0
Gohir.A04G009400 Gossypium hirsutum HOM05D000913 ORTHO05D000687 8.2e-07 57.8 81 43.2
Gohir.D11G154200 Gossypium hirsutum HOM05D000913 ORTHO05D000687 8.2e-07 57.8 80 46.2
Prupe.6G031000 Prunus persica HOM05D000913 ORTHO05D000687 8.2e-07 57.8 79 45.6
Gorai.007G164300 Gossypium raimondii HOM05D000913 ORTHO05D000687 1.1e-06 57.4 80 46.2
MD03G1039000 Malus domestica HOM05D000913 ORTHO05D000687 1.1e-06 57.4 79 44.3
Medtr3g082250 Medicago truncatula HOM05D000913 ORTHO05D000687 1.1e-06 57.4 70 44.3
CSS0022781 Camellia sinensis var. sinensis HOM05D000913 ORTHO05D000687 1.4e-06 57.0 78 47.4
RcHm_v2.0_Chr3g0484311 Rosa chinensis HOM05D000913 ORTHO05D000687 1.4e-06 57.0 75 40.0
Thecc.07G019700 Theobroma cacao HOM05D000913 ORTHO05D000687 1.4e-06 57.0 80 43.8
arahy.Tifrunner.gnm1.ann1.483BUB Arachis hypogaea HOM05D000913 ORTHO05D000687 1.8e-06 56.6 64 50.0
Dinv03824 Davidia involucrata HOM05D000913 ORTHO05D000687 1.8e-06 56.6 76 44.7
Phvul.011G163700 Phaseolus vulgaris HOM05D000913 ORTHO05D000687 1.8e-06 56.6 79 44.3
Ciclev10010297m.g Citrus clementina HOM05D000913 ORTHO05D000687 2.4e-06 56.2 75 46.7
Nn5g28777 Nelumbo nucifera HOM05D000913 ORTHO05D000687 2.4e-06 56.2 77 42.9
TAR629G2544 Trochodendron aralioides HOM05D000913 ORTHO05D000687 2.4e-06 56.2 79 45.6
CARHR095770 Cardamine hirsuta HOM05D000913 ORTHO05D000687 3.1e-06 55.8 142 31.7
Cfa016930 Carpinus fangiana HOM05D000913 ORTHO05D000687 3.1e-06 55.8 76 47.4
Dinv05335 Davidia involucrata HOM05D000913 ORTHO05D000687 3.1e-06 55.8 80 43.8
Duzib213G0838 Durio zibethinus HOM05D000913 ORTHO05D000687 3.1e-06 55.8 72 41.7
MBI14_g16765_MAGBIO Magnolia biondii HOM05D000913 ORTHO05D000687 3.1e-06 55.8 80 42.5
TPR.G27426 Trifolium pratense HOM05D000913 ORTHO05D000687 3.1e-06 55.8 79 39.2
Zm00001eb424580 Zea mays HOM05D000913 ORTHO05D000687 3.1e-06 55.8 71 45.1
arahy.Tifrunner.gnm1.ann1.K8UWAC Arachis hypogaea HOM05D000913 ORTHO05D000687 4.1e-06 55.5 64 48.4
FvH4_3g42110 Fragaria vesca HOM05D000913 ORTHO05D000687 4.1e-06 55.5 72 44.4
Gohir.A04G003500 Gossypium hirsutum HOM05D000913 ORTHO05D000687 4.1e-06 55.5 80 40.0
Gohir.D07G169300 Gossypium hirsutum HOM05D000913 ORTHO05D000687 4.1e-06 55.5 80 42.5
Gorai.001G189300 Gossypium raimondii HOM05D000913 ORTHO05D000687 4.1e-06 55.5 80 42.5
Potri.001G378700 Populus trichocarpa HOM05D000913 ORTHO05D000687 4.1e-06 55.5 70 48.6
GSVIVG01014798001 Vitis vinifera HOM05D000913 ORTHO05D000687 4.1e-06 55.5 75 45.3
GSVIVG01030137001 Vitis vinifera HOM05D000913 ORTHO05D000687 4.1e-06 55.5 80 42.5
CSS0028038 Camellia sinensis var. sinensis HOM05D000913 ORTHO05D000687 5.3e-06 55.1 76 47.4
DCAR_019659 Daucus carota HOM05D000913 ORTHO05D000687 5.3e-06 55.1 81 44.4
FAN11G3382 Fragaria x ananassa HOM05D000913 ORTHO05D000687 5.3e-06 55.1 72 44.4
FAN21G2856 Fragaria x ananassa HOM05D000913 ORTHO05D000687 5.3e-06 55.1 70 44.3
FAN25G2144 Fragaria x ananassa HOM05D000913 ORTHO05D000687 5.3e-06 55.1 70 44.3
MBI14_g16764_MAGBIO Magnolia biondii HOM05D000913 ORTHO05D000687 5.3e-06 55.1 80 43.8
MBI14_g48110_MAGBIO Magnolia biondii HOM05D000913 ORTHO05D000687 5.3e-06 55.1 80 43.8
MD03G1038100 Malus domestica HOM05D000913 ORTHO05D000687 5.3e-06 55.1 75 46.7
Zm00001eb080150 Zea mays HOM05D000913 ORTHO05D000687 5.3e-06 55.1 80 48.8
Ah.12g065180 Amaranthus hybridus HOM05D000913 ORTHO05D000687 6.9e-06 54.7 80 42.5
DCAR_021079 Daucus carota HOM05D000913 ORTHO05D000687 6.9e-06 54.7 81 43.2
Dinv03822 Davidia involucrata HOM05D000913 ORTHO05D000687 6.9e-06 54.7 75 42.7
Oeu049446.1 Olea europaea HOM05D000913 ORTHO05D000687 6.9e-06 54.7 59 44.1
Prupe.6G030600 Prunus persica HOM05D000913 ORTHO05D000687 6.9e-06 54.7 77 44.2
RcHm_v2.0_Chr5g0075321 Rosa chinensis HOM05D000913 ORTHO05D000687 6.9e-06 54.7 75 44.0
SalBow8G3635 Salvia bowleyana HOM05D000913 ORTHO05D000687 6.9e-06 54.7 70 44.3
SalBow8G5025 Salvia bowleyana HOM05D000913 ORTHO05D000687 6.9e-06 54.7 70 44.3
TWI63G0143 Tripterygium wilfordii HOM05D000913 ORTHO05D000687 6.9e-06 54.7 71 43.7
Zm00001eb080210 Zea mays HOM05D000913 ORTHO05D000687 6.9e-06 54.7 76 46.1
FvH4_3g42071 Fragaria vesca HOM05D000913 ORTHO05D000687 9.1e-06 54.3 70 44.3
Psat5g105760 Pisum sativum HOM05D000913 ORTHO05D000687 9.1e-06 54.3 79 40.5
GSVIVG01028844001 Vitis vinifera HOM05D000607 ORTHO05D000518 9.1e-06 54.3 77 44.2
Zm00001eb080130 Zea mays HOM05D000913 ORTHO05D000687 9.1e-06 54.3 77 44.2


User provided reference genes

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