Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.B2XLC5 Arachis hypogaea HOM05D007246 ORTHO05D009066 1.3e-58 229.6 118 100.0
arahy.Tifrunner.gnm1.ann1.HQB0BQ Arachis hypogaea HOM05D007246 ORTHO05D009066 2.9e-58 228.4 118 99.2
Lj5g0017876 Lotus japonicus HOM05D007246 ORTHO05D009066 5.8e-35 151.0 121 63.6
TPR.G18552 Trifolium pratense HOM05D007246 ORTHO05D009066 3.8e-34 148.3 119 63.9
Glyma.20G199500 Glycine max HOM05D007246 ORTHO05D009066 8.4e-34 147.1 121 63.6
Manes.18G076600 Manihot esculenta HOM05D007246 ORTHO05D009066 7.1e-33 144.1 116 65.5
Phvul.L001676 Phaseolus vulgaris HOM05D007246 ORTHO05D009066 1.6e-32 142.9 119 63.9
Potri.002G084400 Populus trichocarpa HOM05D007246 ORTHO05D009066 7.8e-32 140.6 116 62.9
Psat6g131200 Pisum sativum HOM05D007246 ORTHO05D009066 2.3e-31 139.0 119 60.5
Lalb_Chr06g0169561 Lupinus albus HOM05D007246 ORTHO05D009066 3.0e-31 138.7 121 60.3
CANSAT25G3837 Cannabis sativa HOM05D007246 ORTHO05D009066 6.6e-31 137.5 117 61.5
Prupe.1G499600 Prunus persica HOM05D007246 ORTHO05D009066 1.9e-30 136.0 120 61.7
Medtr1g073190 Medicago truncatula HOM05D007246 ORTHO05D009066 3.3e-30 135.2 119 60.5
Ca_09797_v3 Cicer arietinum L. HOM05D007246 ORTHO05D009066 9.6e-30 133.7 119 57.1
CiPaw.05G222500 Carya illinoinensis HOM05D007246 ORTHO05D009066 2.8e-29 132.1 120 62.5
QL09p034990 Quercus lobata HOM05D007246 ORTHO05D009066 2.8e-29 132.1 116 58.6
VMungo0720G2760 Vigna mungo HOM05D003112 ORTHO05D003660 2.8e-29 132.1 95 67.4
MD08G1164500 Malus domestica HOM05D007246 ORTHO05D009066 1.1e-28 130.2 119 58.8
Haze_00452 Corylus avellana HOM05D007246 ORTHO05D009066 4.0e-28 128.3 119 60.5
Duzib093G0837 Durio zibethinus HOM05D007246 ORTHO05D009066 6.9e-28 127.5 121 57.0
RcHm_v2.0_Chr6g0295671 Rosa chinensis HOM05D007246 ORTHO05D009066 8.9e-28 127.1 118 58.5
Atru.chr10.1388 Acer truncatum HOM05D007246 ORTHO05D009066 1.2e-27 126.7 118 59.3
Cfa016011 Carpinus fangiana HOM05D007246 ORTHO05D009066 1.2e-27 126.7 119 60.5
ClCG11G015710 Citrullus lanatus HOM05D007246 ORTHO05D009066 1.2e-27 126.7 111 56.8
FvH4_2g26810 Fragaria vesca HOM05D007246 ORTHO05D009066 1.2e-27 126.7 110 60.0
FAN15G0425 Fragaria x ananassa HOM05D007246 ORTHO05D009066 1.5e-27 126.3 110 61.8
Eucgr.F03786 Eucalyptus grandis HOM05D007246 ORTHO05D009066 2.6e-27 125.6 116 56.9
Ciclev10002868m.g Citrus clementina HOM05D007246 ORTHO05D009066 3.4e-27 125.2 116 56.0
Gorai.010G050000 Gossypium raimondii HOM05D007246 ORTHO05D009066 5.8e-27 124.4 118 55.9
CsaV3_4G028300 Cucumis sativus L. HOM05D007246 ORTHO05D009066 9.9e-27 123.6 113 55.8
TWI36G0927 Tripterygium wilfordii HOM05D007246 ORTHO05D009066 1.7e-26 122.9 116 57.8
Sed0023701 Sechium edule HOM05D007246 ORTHO05D009066 2.2e-26 122.5 111 55.9
Thecc.08G124300 Theobroma cacao HOM05D007246 ORTHO05D009066 2.2e-26 122.5 118 58.5
Gohir.A06G044000 Gossypium hirsutum HOM05D007246 ORTHO05D009066 2.9e-26 122.1 118 54.2
PGR142G2996 Punica granatum HOM05D007246 ORTHO05D009066 2.9e-26 122.1 119 54.6
FAN27G1944 Fragaria x ananassa HOM05D007246 ORTHO05D009066 3.8e-26 121.7 103 62.1
Gohir.D06G044900 Gossypium hirsutum HOM05D007246 ORTHO05D009066 6.4e-26 120.9 119 55.5
GSVIVG01008877001 Vitis vinifera HOM05D007246 ORTHO05D009066 4.2e-25 118.2 118 55.9
MELO3C010475.2 Cucumis melo HOM05D007246 ORTHO05D009066 3.5e-24 115.2 113 52.2
Actinidia02617 Actinidia chinensis HOM05D007246 ORTHO05D009066 1.7e-23 112.8 96 58.3
COL.COLO4_35932 Corchorus olitorius HOM05D007246 ORTHO05D009066 1.7e-23 112.8 119 52.1
Hma1.2p1_0186F.1_g081760 Hydrangea macrophylla HOM05D007246 ORTHO05D009066 5.1e-23 111.3 118 50.8
Nn5g28257 Nelumbo nucifera HOM05D007246 ORTHO05D009066 6.6e-23 110.9 120 50.8
Aqoxy6G00205 Aquilegia oxysepala HOM05D007246 ORTHO05D009066 8.7e-23 110.5 108 50.9
TAR381G0547 Trochodendron aralioides HOM05D007246 ORTHO05D009066 1.1e-22 110.2 102 55.9
Nitab4.5_0001803g0080 Nicotiana tabacum HOM05D007246 ORTHO05D009066 1.9e-22 109.4 118 49.2
Sp1g35150 Schrenkiella parvula HOM05D007246 ORTHO05D009066 1.9e-22 109.4 110 54.5
Cpa.g.sc36.60 Carica papaya HOM05D007246 ORTHO05D009066 4.3e-22 108.2 101 59.4
Rhsim03G0059000 Rhododendron simsii HOM05D007246 ORTHO05D009066 5.6e-22 107.8 96 54.2
Thhalv10011824m.g Eutrema salsugineum HOM05D007246 ORTHO05D009066 2.1e-21 105.9 110 53.6
AT1G48200 Arabidopsis thaliana HOM05D007246 ORTHO05D009066 2.8e-21 105.5 111 54.1
A06p47840 Brassica napus HOM05D007246 ORTHO05D009066 2.8e-21 105.5 110 54.5
BraA06t27654Z Brassica rapa HOM05D007246 ORTHO05D009066 2.8e-21 105.5 110 54.5
CSS0048322 Camellia sinensis var. sinensis HOM05D007246 ORTHO05D009066 3.6e-21 105.1 121 48.8
PGSC0003DMG400000898 Solanum tuberosum HOM05D007246 ORTHO05D009066 3.6e-21 105.1 112 49.1
AL1G54790 Arabidopsis lyrata HOM05D007246 ORTHO05D009066 4.8e-21 104.8 102 56.9
Sopen11g007630 Solanum pennellii HOM05D007246 ORTHO05D009066 1.1e-20 103.6 112 47.3
EL10Ac1g01002 Beta vulgaris HOM05D007246 ORTHO05D009066 1.4e-20 103.2 112 48.2
BcaC06g31695 Brassica carinata HOM05D007246 ORTHO05D009066 1.4e-20 103.2 110 52.7
C06p02690 Brassica napus HOM05D007246 ORTHO05D009066 1.4e-20 103.2 115 47.8
BolC6t35395H Brassica oleracea HOM05D007246 ORTHO05D009066 1.4e-20 103.2 115 47.8
DCAR_003548 Daucus carota HOM05D007246 ORTHO05D009066 1.4e-20 103.2 99 51.5
Lsat_1_v5_gn_5_179321 Lactuca sativa HOM05D007246 ORTHO05D009066 1.4e-20 103.2 96 53.1
Solyc11g012890.2 Solanum lycopersicum HOM05D007246 ORTHO05D009066 1.4e-20 103.2 112 47.3
Carub.0001s3729 Capsella rubella HOM05D007246 ORTHO05D009066 1.8e-20 102.8 111 53.2
Aa31LG10G5550 Aethionema arabicum HOM05D007246 ORTHO05D009066 2.4e-20 102.4 110 52.7
Sp1g35170 Schrenkiella parvula HOM05D007246 ORTHO05D009066 3.1e-20 102.1 110 50.9
Peaxi162Scf00537g00034 Petunia axillaris HOM05D007246 ORTHO05D009066 6.9e-20 100.9 120 47.5
BcaC06g34651 Brassica carinata HOM05D007246 ORTHO05D009066 9.0e-20 100.5 109 52.3
C07p26120 Brassica napus HOM05D007246 ORTHO05D009066 9.0e-20 100.5 109 52.3
BolC7t43138H Brassica oleracea HOM05D007246 ORTHO05D009066 9.0e-20 100.5 109 52.3
BcaC08g43014 Brassica carinata HOM05D007246 ORTHO05D009066 1.2e-19 100.1 115 47.0
Ah.05g171160 Amaranthus hybridus HOM05D007246 ORTHO05D009066 1.5e-19 99.8 94 54.3
PSO170G1503 Papaver somniferum HOM05D007246 ORTHO05D009066 1.5e-19 99.8 121 43.8
A06p04630 Brassica napus HOM05D007246 ORTHO05D009066 2.0e-19 99.4 112 49.1
HanXRQChr13g0407621 Helianthus annuus HOM05D007246 ORTHO05D009066 2.6e-19 99.0 94 52.1
PSO528G0221 Papaver somniferum HOM05D007246 ORTHO05D009066 2.6e-19 99.0 121 43.8
Oeu040422.1 Olea europaea HOM05D007246 ORTHO05D009066 5.8e-19 97.8 113 49.6
Migut.C01135 Erythranthe guttata HOM05D007246 ORTHO05D009066 2.2e-18 95.9 92 51.1
Sc25g0000500 Simmondsia chinensis HOM05D007246 ORTHO05D009066 2.2e-18 95.9 94 53.2
Hund17288 Selenicereus undatus HOM05D007246 ORTHO05D009066 3.8e-18 95.1 94 53.2
BraA06t23667Z Brassica rapa HOM05D007246 ORTHO05D009066 4.9e-18 94.7 111 48.6
Nitab4.5_0001273g0060 Nicotiana tabacum HOM05D007246 ORTHO05D009066 4.9e-18 94.7 93 49.5
SGA_v2.0_scaffold24G10465 Striga asiatica HOM05D007246 ORTHO05D009066 4.9e-18 94.7 92 53.3
MSTRG.1448 Avicennia marina HOM05D007246 ORTHO05D009066 4.2e-17 91.7 92 51.1
arahy.Tifrunner.gnm1.ann1.65RZ9M Arachis hypogaea HOM05D007246 ORTHO05D009066 1.6e-16 89.7 69 72.5
ECA248G1302 Erigeron canadensis HOM05D007246 ORTHO05D009066 2.7e-16 89.0 112 42.0
CARHR037830 Cardamine hirsuta HOM05D007246 ORTHO05D009066 3.5e-16 88.6 76 60.5
Carub.0007s3396 Capsella rubella HOM05D007246 ORTHO05D009066 6.0e-16 87.8 109 45.9
unitig_37.g12972 Utricularia gibba HOM05D007246 ORTHO05D009066 2.3e-15 85.9 94 51.1
THA.LOC104821809 Tarenaya hassleriana HOM05D007246 ORTHO05D009066 3.9e-15 85.1 103 48.5
CDE06G1719 Ceratophyllum demersum HOM05D007246 ORTHO05D009066 6.7e-15 84.3 107 46.7
SalBow7G0738 Salvia bowleyana HOM05D007246 ORTHO05D009066 8.7e-15 84.0 92 44.6
MBI01_g01255_MAGBIO Magnolia biondii HOM05D007246 ORTHO05D009066 6.2e-13 77.8 79 49.4
MBI01_g01254_MAGBIO Magnolia biondii HOM05D007246 ORTHO05D009066 2.4e-12 75.9 79 48.1
BcaB07g33783 Brassica carinata HOM05D007246 ORTHO05D009066 5.3e-12 74.7 100 45.0
FAN20G0163 Fragaria x ananassa HOM05D007246 ORTHO05D009066 5.3e-12 74.7 63 61.9
MBI01_g01252_MAGBIO Magnolia biondii HOM05D007246 ORTHO05D009066 6.9e-12 74.3 79 46.8
MBI01_g01253_MAGBIO Magnolia biondii HOM05D007246 ORTHO05D009066 6.9e-12 74.3 79 46.8
ATR0716G022 Amborella trichopoda HOM05D007246 ORTHO05D009066 4.9e-10 68.2 82 43.9
SGA_v2.0_scaffold52G18970 Striga asiatica HOM05D007246 ORTHO05D009066 3.2e-09 65.5 93 39.8
HPP92_002815 Vanilla planifolia HOM05D007246 ORTHO05D009066 2.1e-08 62.8 84 40.5
Os06g0149500 Oryza sativa ssp. japonica HOM05D007246 ORTHO05D009066 2.7e-08 62.4 94 38.3
BcaB07g33731 Brassica carinata HOM05D007246 ORTHO05D009066 3.5e-08 62.0 68 48.5
BcaB07g33733 Brassica carinata HOM05D007246 ORTHO05D009066 3.5e-08 62.0 68 48.5
SEGI_11751 Sequoiadendron giganteum HOM05D007246 ORTHO05D009066 1.3e-07 60.1 77 40.3
Lsat_1_v5_gn_4_16480 Lactuca sativa HOM05D007246 ORTHO05D009066 9.6e-06 53.9 36 61.1


User provided reference genes

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