Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.B19VPR Arachis hypogaea HOM05D006972 ORTHO05D008519 1.2e-106 389.8 196 100.0
arahy.Tifrunner.gnm1.ann1.K20VQB Arachis hypogaea HOM05D006972 ORTHO05D008519 1.2e-106 389.8 196 100.0
Lj2g0018473 Lotus japonicus HOM05D006972 ORTHO05D008519 3.5e-77 292.0 166 87.3
TPR.G33865 Trifolium pratense HOM05D006972 ORTHO05D008519 1.6e-74 283.1 166 84.3
Glyma.01G158800 Glycine max HOM05D006972 ORTHO05D008519 1.4e-73 280.0 164 84.8
Lalb_Chr16g0380011 Lupinus albus HOM05D006972 ORTHO05D008519 2.3e-73 279.3 166 81.9
Psat2g148200 Pisum sativum HOM05D006972 ORTHO05D008519 3.1e-73 278.9 166 83.7
Ca_24981_v3 Cicer arietinum L. HOM05D006972 ORTHO05D008519 6.8e-73 277.7 166 81.3
Manes.01G155400 Manihot esculenta HOM05D006972 ORTHO05D008519 2.0e-72 276.2 163 82.8
RcHm_v2.0_Chr2g0097181 Rosa chinensis HOM05D006972 ORTHO05D008519 1.9e-70 269.6 164 79.9
Potri.005G101501 Populus trichocarpa HOM05D006972 ORTHO05D008519 3.2e-70 268.9 163 81.0
TAR628G0904 Trochodendron aralioides HOM05D006972 ORTHO05D008519 3.2e-70 268.9 164 79.9
TWI73G0968 Tripterygium wilfordii HOM05D006972 ORTHO05D008519 2.1e-69 266.2 163 80.4
Prupe.7G182900 Prunus persica HOM05D006972 ORTHO05D008519 2.7e-69 265.8 164 81.1
FAN19G2622 Fragaria x ananassa HOM05D006972 ORTHO05D008519 3.5e-69 265.4 173 75.1
Phvul.002G116601 Phaseolus vulgaris HOM05D006972 ORTHO05D008519 2.3e-68 262.7 166 80.7
Rhsim10G0195900 Rhododendron simsii HOM05D006972 ORTHO05D008519 6.6e-68 261.2 164 79.3
CiPaw.08G181600 Carya illinoinensis HOM05D006972 ORTHO05D008519 1.1e-67 260.4 164 79.9
QL06p052953 Quercus lobata HOM05D006972 ORTHO05D008519 1.9e-67 259.6 186 72.6
Eucgr.I02225 Eucalyptus grandis HOM05D006972 ORTHO05D008519 3.3e-67 258.8 161 79.5
Atru.chr3.134 Acer truncatum HOM05D006972 ORTHO05D008519 4.3e-67 258.5 164 79.3
Actinidia17360 Actinidia chinensis HOM05D006972 ORTHO05D008519 7.3e-67 257.7 164 77.4
CSS0043244 Camellia sinensis var. sinensis HOM05D006972 ORTHO05D008519 7.3e-67 257.7 164 76.2
Cfa007077 Carpinus fangiana HOM05D006972 ORTHO05D008519 7.3e-67 257.7 164 76.8
GSVIVG01026641001 Vitis vinifera HOM05D006972 ORTHO05D008519 7.3e-67 257.7 164 78.7
Sed0027466 Sechium edule HOM05D006972 ORTHO05D008519 1.2e-66 256.9 161 78.3
VMungo1215G1992 Vigna mungo HOM05D006972 ORTHO05D008519 1.2e-66 256.9 166 78.9
vmacro20633 Vaccinium macrocarpon HOM05D006972 ORTHO05D008519 1.6e-66 256.5 164 74.4
ClCG10G000270 Citrullus lanatus HOM05D006972 ORTHO05D008519 2.1e-66 256.1 164 76.8
MELO3C013724.2 Cucumis melo HOM05D006972 ORTHO05D008519 2.1e-66 256.1 161 77.0
Nn5g30989 Nelumbo nucifera HOM05D006972 ORTHO05D008519 2.8e-66 255.8 161 77.6
Nitab4.5_0005297g0020 Nicotiana tabacum HOM05D006972 ORTHO05D008519 2.8e-66 255.8 164 78.0
Haze_03655 Corylus avellana HOM05D006972 ORTHO05D008519 3.6e-66 255.4 169 74.0
MBI05_g14344_MAGBIO Magnolia biondii HOM05D006972 ORTHO05D008519 4.7e-66 255.0 166 77.1
PSO675G3277 Papaver somniferum HOM05D006972 ORTHO05D008519 4.7e-66 255.0 164 74.4
Zm00001eb002450 Zea mays HOM05D006972 ORTHO05D008519 1.1e-65 253.8 164 73.8
Nitab4.5_0000495g0120 Nicotiana tabacum HOM05D006972 ORTHO05D008519 1.8e-65 253.1 164 76.8
Oeu012451.1 Olea europaea HOM05D006972 ORTHO05D008519 2.3e-65 252.7 164 75.0
Cpa.g.sc365.5 Carica papaya HOM05D006972 ORTHO05D008519 4.0e-65 251.9 164 73.8
Cc07_g11850 Coffea canephora HOM05D006972 ORTHO05D008519 4.0e-65 251.9 164 76.2
CANSAT25G3183 Cannabis sativa HOM05D006972 ORTHO05D008519 6.8e-65 251.1 163 76.1
CsaV3_3G000300 Cucumis sativus L. HOM05D006972 ORTHO05D008519 6.8e-65 251.1 161 75.8
Thecc.01G005600 Theobroma cacao HOM05D006972 ORTHO05D008519 3.4e-64 248.8 164 72.6
MSTRG.3630 Avicennia marina HOM05D006972 ORTHO05D008519 4.4e-64 248.4 164 73.8
Ciclev10026547m.g Citrus clementina HOM05D006972 ORTHO05D008519 4.4e-64 248.4 163 74.2
Solyc03g032120.3 Solanum lycopersicum HOM05D006972 ORTHO05D008519 1.3e-63 246.9 164 74.4
CAN.G354.14 Capsicum annuum HOM05D006972 ORTHO05D008519 2.2e-63 246.1 164 73.8
Migut.L00961 Erythranthe guttata HOM05D006972 ORTHO05D008519 2.2e-63 246.1 165 73.3
HanXRQChr14g0442531 Helianthus annuus HOM05D006972 ORTHO05D008519 2.9e-63 245.7 161 73.9
Duzib147G0479 Durio zibethinus HOM05D006972 ORTHO05D008519 3.7e-63 245.4 164 69.5
Lsat_1_v5_gn_2_73640 Lactuca sativa HOM05D006972 ORTHO05D008519 4.9e-63 245.0 161 72.7
FAN23G2574 Fragaria x ananassa HOM05D006972 ORTHO05D008519 1.1e-62 243.8 201 63.2
ECA238G2655 Erigeron canadensis HOM05D006972 ORTHO05D008519 1.4e-62 243.4 164 72.6
ATR0807G046 Amborella trichopoda HOM05D006972 ORTHO05D008519 5.4e-62 241.5 161 75.2
COL.COLO4_24144 Corchorus olitorius HOM05D006972 ORTHO05D008519 1.2e-61 240.4 164 68.9
Gohir.A07G171100 Gossypium hirsutum HOM05D006972 ORTHO05D008519 1.2e-61 240.4 161 68.9
SalBow5G0785 Salvia bowleyana HOM05D006972 ORTHO05D008519 1.2e-61 240.4 164 70.1
PSO541G2195 Papaver somniferum HOM05D006972 ORTHO05D008519 2.1e-61 239.6 164 73.8
CDE04G1133 Ceratophyllum demersum HOM05D006972 ORTHO05D008519 6.0e-61 238.0 164 69.5
THA.LOC104826441 Tarenaya hassleriana HOM05D006972 ORTHO05D008519 1.0e-60 237.3 163 70.6
Aqoxy5G01011 Aquilegia oxysepala HOM05D006972 ORTHO05D008519 1.3e-60 236.9 164 73.2
Gohir.D07G177900 Gossypium hirsutum HOM05D006972 ORTHO05D008519 1.7e-60 236.5 166 66.3
EL10Ac5g11121 Beta vulgaris HOM05D006972 ORTHO05D008519 3.0e-60 235.7 164 67.1
AUR62021571 Chenopodium quinoa HOM05D006972 ORTHO05D008519 3.0e-60 235.7 165 67.9
Gorai.001G199000 Gossypium raimondii HOM05D006972 ORTHO05D008519 3.9e-60 235.3 161 67.7
AUR62008520 Chenopodium quinoa HOM05D006972 ORTHO05D008519 1.9e-59 233.0 165 67.3
AL8G45620 Arabidopsis lyrata HOM05D006972 ORTHO05D008519 9.5e-59 230.7 157 69.4
Medtr5g024200 Medicago truncatula HOM05D006972 ORTHO05D008519 2.8e-58 229.2 136 84.6
Hund19696 Selenicereus undatus HOM05D006972 ORTHO05D008519 3.6e-58 228.8 164 67.7
Ah.02g113990 Amaranthus hybridus HOM05D006972 ORTHO05D008519 8.9e-57 224.2 164 63.4
AT5G66005 Arabidopsis thaliana HOM05D006972 ORTHO05D008519 7.6e-56 221.1 157 66.2
FvH4_1g10330 Fragaria vesca HOM05D006972 ORTHO05D008519 2.2e-55 219.5 130 80.8
HPP92_026034 Vanilla planifolia HOM05D006972 ORTHO05D008519 8.4e-55 217.6 171 63.2
Haze_03661 Corylus avellana HOM05D006972 ORTHO05D008519 7.1e-54 214.5 129 81.4
RcHm_v2.0_Chr2g0090391 Rosa chinensis HOM05D006972 ORTHO05D008519 7.1e-54 214.5 130 80.8
RcHm_v2.0_Chr1g0346531 Rosa chinensis HOM05D006972 ORTHO05D008519 1.2e-53 213.8 130 80.0
Carub.0008s2851 Capsella rubella HOM05D006972 ORTHO05D008519 1.8e-49 199.9 173 60.7
Sc03g0003950 Simmondsia chinensis HOM05D006972 ORTHO05D008519 2.4e-49 199.5 129 71.3
SGA_v2.0_scaffold132G34519 Striga asiatica HOM05D006972 ORTHO05D008519 3.1e-49 199.1 146 69.2
Peaxi162Scf00122g02416 Petunia axillaris HOM05D006972 ORTHO05D008519 2.2e-47 193.0 117 79.5
MD15G1231300 Malus domestica HOM05D006972 ORTHO05D008519 6.4e-47 191.4 117 77.8
FAN26G0227 Fragaria x ananassa HOM05D006972 ORTHO05D008519 4.2e-46 188.7 126 75.4
FAN28G2862 Fragaria x ananassa HOM05D006972 ORTHO05D008519 2.7e-45 186.0 110 81.8
Os03g0130750 Oryza sativa ssp. japonica HOM05D006972 ORTHO05D008519 1.6e-42 176.8 113 72.6
unitig_747.g21812 Utricularia gibba HOM05D006972 ORTHO05D008519 4.3e-35 152.1 179 50.3
Mapoly0114s0024 Marchantia polymorpha HOM05D006972 ORTHO05D008519 9.6e-35 151.0 192 46.9
Lsat_1_v5_gn_5_10160 Lactuca sativa HOM05D006972 ORTHO05D008519 6.9e-33 144.8 107 68.2
Glyma.11G085800 Glycine max HOM05D006972 ORTHO05D008519 1.5e-32 143.7 135 60.0
CANSAT35G0485 Cannabis sativa HOM05D006972 ORTHO05D008519 4.9e-31 138.7 87 78.2
RcHm_v2.0_Chr5g0047551 Rosa chinensis HOM05D006972 ORTHO05D008519 4.9e-31 138.7 80 82.5
SMO352G0055 Selaginella moellendorffii HOM05D006972 ORTHO05D008519 4.6e-29 132.1 125 58.4
RcHm_v2.0_Chr5g0015201 Rosa chinensis HOM05D006972 ORTHO05D008519 3.0e-28 129.4 71 87.3
Cre16.g682050 Chlamydomonas reinhardtii HOM05D006972 ORTHO05D008519 1.1e-25 120.9 162 45.7
Sopen03g005970 Solanum pennellii HOM05D006972 ORTHO05D008519 3.4e-24 115.9 79 70.9
Actinidia22899 Actinidia chinensis HOM05D006972 ORTHO05D008519 1.1e-22 110.9 71 76.1
SMO147G0393 Selaginella moellendorffii HOM05D006972 ORTHO05D008519 1.1e-19 100.9 125 37.6
Mapoly0023s0154 Marchantia polymorpha HOM05D006972 ORTHO05D008519 9.7e-19 97.8 158 36.1
Lsat_1_v5_gn_1_125281 Lactuca sativa HOM05D006972 ORTHO05D008519 1.6e-18 97.1 60 76.7
MCO16G109 Micromonas commoda HOM05D006972 ORTHO05D008519 2.8e-18 96.3 172 37.8
Pp3c7_7150 Physcomitrium patens HOM05D006972 ORTHO05D008519 2.8e-18 96.3 158 36.1
Lsat_1_v5_gn_8_30121 Lactuca sativa HOM05D006972 ORTHO05D008519 3.1e-17 92.8 60 76.7
PRCOL_00004399 Prasinoderma coloniale HOM05D006972 ORTHO05D008519 5.3e-17 92.0 144 44.4
Pp3c11_19180 Physcomitrium patens HOM05D006972 ORTHO05D008519 9.0e-17 91.3 158 34.8
MD15G1231400 Malus domestica HOM05D006972 ORTHO05D008519 5.5e-14 82.0 49 77.6
arahy.Tifrunner.gnm1.ann1.9GY3HT Arachis hypogaea HOM05D006972 ORTHO05D008519 2.7e-13 79.7 50 80.0
CBR_g19759 Chara braunii HOM05D006972 ORTHO05D008519 1.4e-12 77.4 104 45.2
arahy.Tifrunner.gnm1.ann1.A1T4XS Arachis hypogaea HOM05D006972 ORTHO05D008519 3.3e-11 72.8 50 72.0
arahy.Tifrunner.gnm1.ann1.J6JT3S Arachis hypogaea HOM05D006972 ORTHO05D008519 3.4e-08 62.8 55 65.5


User provided reference genes

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