Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.AY2SMN Arachis hypogaea HOM05D006528 ORTHO05D008117 2.8e-42 174.9 87 100.0
arahy.Tifrunner.gnm1.ann1.P7ITSZ Arachis hypogaea HOM05D006528 ORTHO05D008117 6.1e-42 173.7 87 98.9
Psat1g213920 Pisum sativum HOM05D006528 ORTHO05D008117 2.2e-39 165.2 85 95.3
Medtr2g009660 Medicago truncatula HOM05D006528 ORTHO05D008117 4.9e-39 164.1 85 94.1
Ca_00167_v3 Cicer arietinum L. HOM05D006528 ORTHO05D008117 2.4e-38 161.8 88 93.2
Lalb_Chr16g0382981 Lupinus albus HOM05D006528 ORTHO05D008117 3.5e-37 157.9 85 89.4
arahy.Tifrunner.gnm1.ann1.UT9VTR Arachis hypogaea HOM05D006528 ORTHO05D008117 1.7e-36 155.6 82 91.5
Lalb_Chr09g0326921 Lupinus albus HOM05D006528 ORTHO05D008117 1.7e-36 155.6 85 88.2
PGR142G2367 Punica granatum HOM05D006528 ORTHO05D008117 1.7e-36 155.6 85 88.2
Rhsim11G0141900 Rhododendron simsii HOM05D006528 ORTHO05D008117 3.9e-36 154.5 85 88.2
FAN20G2769 Fragaria x ananassa HOM05D006528 ORTHO05D008117 8.6e-36 153.3 85 87.1
Glyma.07G182600 Glycine max HOM05D006528 ORTHO05D008117 8.6e-36 153.3 85 87.1
Glyma.08G067300 Glycine max HOM05D006528 ORTHO05D008117 8.6e-36 153.3 85 87.1
arahy.Tifrunner.gnm1.ann1.QJC347 Arachis hypogaea HOM05D006528 ORTHO05D008117 1.1e-35 152.9 82 90.2
Dinv16007 Davidia involucrata HOM05D006528 ORTHO05D008117 1.5e-35 152.5 85 87.1
RcHm_v2.0_Chr6g0270691 Rosa chinensis HOM05D006528 ORTHO05D008117 1.9e-35 152.1 85 87.1
CiPaw.05G028900 Carya illinoinensis HOM05D006528 ORTHO05D008117 3.3e-35 151.4 84 88.1
Haze_10502 Corylus avellana HOM05D006528 ORTHO05D008117 4.3e-35 151.0 84 86.9
FvH4_2g11550 Fragaria vesca HOM05D006528 ORTHO05D008117 4.3e-35 151.0 85 85.9
FAN15G1663 Fragaria x ananassa HOM05D006528 ORTHO05D008117 4.3e-35 151.0 85 85.9
FAN24G2600 Fragaria x ananassa HOM05D006528 ORTHO05D008117 4.3e-35 151.0 85 85.9
FAN27G2089 Fragaria x ananassa HOM05D006528 ORTHO05D008117 4.3e-35 151.0 85 85.9
Lj4g0001130 Lotus japonicus HOM05D006528 ORTHO05D008117 4.3e-35 151.0 84 85.7
MD05G1048500 Malus domestica HOM05D006528 ORTHO05D008117 4.3e-35 151.0 85 87.1
Psat7g101760 Pisum sativum HOM05D006528 ORTHO05D008117 4.3e-35 151.0 87 83.9
vmacro01866 Vaccinium macrocarpon HOM05D006528 ORTHO05D008117 4.3e-35 151.0 85 85.9
Eucgr.I02615 Eucalyptus grandis HOM05D006528 ORTHO05D008117 5.6e-35 150.6 84 86.9
MD10G1054900 Malus domestica HOM05D006528 ORTHO05D008117 5.6e-35 150.6 85 87.1
Medtr4g093660 Medicago truncatula HOM05D006528 ORTHO05D008117 5.6e-35 150.6 85 85.9
Ah.01g007370 Amaranthus hybridus HOM05D006528 ORTHO05D008117 7.3e-35 150.2 84 86.9
Cc02_g20840 Coffea canephora HOM05D006528 ORTHO05D008117 1.2e-34 149.4 86 84.9
Oeu027056.1 Olea europaea HOM05D006528 ORTHO05D008117 1.2e-34 149.4 86 84.9
Lj9A347T51 Lonicera japonica HOM05D006528 ORTHO05D008117 1.6e-34 149.1 85 87.1
Atru.chr6.1284 Acer truncatum HOM05D006528 ORTHO05D008117 2.1e-34 148.7 85 84.7
Dinv24144 Davidia involucrata HOM05D006528 ORTHO05D008117 2.1e-34 148.7 85 85.9
Phvul.002G213700 Phaseolus vulgaris HOM05D006528 ORTHO05D008117 2.1e-34 148.7 85 84.7
Ca_18387_v3 Cicer arietinum L. HOM05D006528 ORTHO05D008117 3.6e-34 147.9 87 82.8
Thecc.02G128200 Theobroma cacao HOM05D006528 ORTHO05D008117 3.6e-34 147.9 87 85.1
TWI14G0454 Tripterygium wilfordii HOM05D006528 ORTHO05D008117 4.7e-34 147.5 86 82.6
DCAR_003600 Daucus carota HOM05D006528 ORTHO05D008117 8.0e-34 146.7 85 82.4
PSO541G2139 Papaver somniferum HOM05D006528 ORTHO05D008117 8.0e-34 146.7 84 84.5
PSO675G1859 Papaver somniferum HOM05D006528 ORTHO05D008117 8.0e-34 146.7 84 84.5
GSVIVG01012516001 Vitis vinifera HOM05D006528 ORTHO05D008117 8.0e-34 146.7 87 80.5
Zm00001eb053530 Zea mays HOM05D006528 ORTHO05D008117 8.0e-34 146.7 85 84.7
EL10Ac9g22060 Beta vulgaris HOM05D006528 ORTHO05D008117 1.1e-33 146.4 86 80.2
Hma1.2p1_1093F.1_g256310 Hydrangea macrophylla HOM05D006528 ORTHO05D008117 1.1e-33 146.4 87 83.9
Hund06469 Selenicereus undatus HOM05D006528 ORTHO05D008117 1.1e-33 146.4 85 82.4
Actinidia02398 Actinidia chinensis HOM05D006528 ORTHO05D008117 1.4e-33 146.0 84 85.7
Potri.007G116400 Populus trichocarpa HOM05D006528 ORTHO05D008117 1.4e-33 146.0 86 82.6
Sed0017031 Sechium edule HOM05D006528 ORTHO05D008117 1.4e-33 146.0 83 85.5
Manes.07G041500 Manihot esculenta HOM05D006528 ORTHO05D008117 1.8e-33 145.6 85 83.5
Peaxi162Scf00152g00928 Petunia axillaris HOM05D006528 ORTHO05D008117 1.8e-33 145.6 80 88.8
CSS0011274 Camellia sinensis var. sinensis HOM05D006528 ORTHO05D008117 3.1e-33 144.8 86 81.4
Ciclev10029672m.g Citrus clementina HOM05D006528 ORTHO05D008117 3.1e-33 144.8 82 85.4
Prupe.8G071000 Prunus persica HOM05D006528 ORTHO05D008117 3.1e-33 144.8 85 83.5
Sabra07G0094700 Salix brachista HOM05D006528 ORTHO05D008117 3.1e-33 144.8 86 81.4
Os03g0690000 Oryza sativa ssp. japonica HOM05D006528 ORTHO05D008117 4.0e-33 144.4 85 81.2
Nn5g29836 Nelumbo nucifera HOM05D006528 ORTHO05D008117 5.2e-33 144.1 88 81.8
Aqoxy6G00830 Aquilegia oxysepala HOM05D006528 ORTHO05D008117 6.8e-33 143.7 84 81.0
CANSAT21G1972 Cannabis sativa HOM05D006528 ORTHO05D008117 6.8e-33 143.7 82 85.4
AUR62027098 Chenopodium quinoa HOM05D006528 ORTHO05D008117 6.8e-33 143.7 81 84.0
AUR62030940 Chenopodium quinoa HOM05D006528 ORTHO05D008117 6.8e-33 143.7 89 78.7
TAR628G0148 Trochodendron aralioides HOM05D006528 ORTHO05D008117 6.8e-33 143.7 80 86.2
CAN.G31.4 Capsicum annuum HOM05D006528 ORTHO05D008117 8.9e-33 143.3 80 87.5
Sopen11g019700 Solanum pennellii HOM05D006528 ORTHO05D008117 1.2e-32 142.9 80 87.5
PGSC0003DMG400025320 Solanum tuberosum HOM05D006528 ORTHO05D008117 1.2e-32 142.9 80 87.5
PGSC0003DMG400039300 Solanum tuberosum HOM05D006528 ORTHO05D008117 1.2e-32 142.9 80 87.5
COL.COLO4_32404 Corchorus olitorius HOM05D006528 ORTHO05D008117 1.5e-32 142.5 85 81.2
Gohir.A13G050500 Gossypium hirsutum HOM05D006528 ORTHO05D008117 2.0e-32 142.1 86 82.6
Gohir.D13G049300 Gossypium hirsutum HOM05D006528 ORTHO05D008117 2.0e-32 142.1 86 82.6
HPP92_001604 Vanilla planifolia HOM05D006528 ORTHO05D008117 2.0e-32 142.1 85 80.0
MELO3C018053.2 Cucumis melo HOM05D006528 ORTHO05D008117 2.6e-32 141.7 82 84.1
Sc05g0005550 Simmondsia chinensis HOM05D006528 ORTHO05D008117 2.6e-32 141.7 83 79.5
Ah.01g023880 Amaranthus hybridus HOM05D006528 ORTHO05D008117 3.4e-32 141.4 84 83.3
CARHR241740 Cardamine hirsuta HOM05D006528 ORTHO05D008117 3.4e-32 141.4 85 78.8
HanXRQChr08g0227171 Helianthus annuus HOM05D006528 ORTHO05D008117 3.4e-32 141.4 85 83.5
Lsat_1_v5_gn_7_82720 Lactuca sativa HOM05D006528 ORTHO05D008117 3.4e-32 141.4 82 82.9
Nitab4.5_0001093g0020 Nicotiana tabacum HOM05D006528 ORTHO05D008117 3.4e-32 141.4 80 85.0
Migut.B00544 Erythranthe guttata HOM05D006528 ORTHO05D008117 4.4e-32 141.0 87 82.8
ClCG10G009640 Citrullus lanatus HOM05D006528 ORTHO05D008117 5.8e-32 140.6 82 82.9
ECA234G2655 Erigeron canadensis HOM05D006528 ORTHO05D008117 5.8e-32 140.6 82 81.7
Nitab4.5_0000001g0270 Nicotiana tabacum HOM05D006528 ORTHO05D008117 7.5e-32 140.2 80 85.0
Carub.0007s0679 Capsella rubella HOM05D006528 ORTHO05D008117 1.7e-31 139.0 82 80.5
Duzib248G1107 Durio zibethinus HOM05D006528 ORTHO05D008117 2.2e-31 138.7 78 85.9
Nn1g05616 Nelumbo nucifera HOM05D006528 ORTHO05D008117 3.7e-31 137.9 78 85.9
VMungo0251G1582 Vigna mungo HOM05D006528 ORTHO05D008117 3.7e-31 137.9 99 71.7
BcaC09g52175 Brassica carinata HOM05D006528 ORTHO05D008117 4.9e-31 137.5 82 79.3
C01p05070 Brassica napus HOM05D006528 ORTHO05D008117 4.9e-31 137.5 82 79.3
BolC1t00489H Brassica oleracea HOM05D006528 ORTHO05D008117 4.9e-31 137.5 82 79.3
AT4G33640 Arabidopsis thaliana HOM05D006528 ORTHO05D008117 6.4e-31 137.1 82 78.0
A01p04680 Brassica napus HOM05D006528 ORTHO05D008117 6.4e-31 137.1 82 79.3
BraA01t00451Z Brassica rapa HOM05D006528 ORTHO05D008117 6.4e-31 137.1 82 79.3
Lsat_1_v5_gn_5_110181 Lactuca sativa HOM05D006528 ORTHO05D008117 8.3e-31 136.7 83 79.5
MBI16_g06019_MAGBIO Magnolia biondii HOM05D006528 ORTHO05D008117 8.3e-31 136.7 103 68.9
Thhalv10026671m.g Eutrema salsugineum HOM05D006528 ORTHO05D008117 1.4e-30 136.0 80 81.2
Sp7g31370 Schrenkiella parvula HOM05D006528 ORTHO05D008117 1.4e-30 136.0 80 81.2
QL11p025380 Quercus lobata HOM05D006528 ORTHO05D008117 1.9e-30 135.6 112 66.1
Sed0022924 Sechium edule HOM05D006528 ORTHO05D008117 1.9e-30 135.6 95 72.6
THA.LOC104819510 Tarenaya hassleriana HOM05D006528 ORTHO05D008117 1.9e-30 135.6 80 80.0
AL7G17860 Arabidopsis lyrata HOM05D006528 ORTHO05D008117 2.4e-30 135.2 80 80.0
Cfa004847 Carpinus fangiana HOM05D006528 ORTHO05D008117 2.4e-30 135.2 73 89.0
ATR0767G170 Amborella trichopoda HOM05D006528 ORTHO05D008117 3.2e-30 134.8 86 77.9
unitig_0.g617 Utricularia gibba HOM05D006528 ORTHO05D008117 3.2e-30 134.8 83 79.5
HanXRQChr10g0297761 Helianthus annuus HOM05D006528 ORTHO05D008117 7.0e-30 133.7 78 82.1
Aa31sc21G60 Aethionema arabicum HOM05D006528 ORTHO05D008117 9.2e-30 133.3 85 74.1
SMO358G0255 Selaginella moellendorffii HOM05D006528 ORTHO05D008117 9.2e-30 133.3 78 84.6
CDE07G0501 Ceratophyllum demersum HOM05D006528 ORTHO05D008117 1.2e-29 132.9 82 78.0
SEGI_09895 Sequoiadendron giganteum HOM05D006528 ORTHO05D008117 1.6e-29 132.5 85 77.6
Mapoly0189s0006 Marchantia polymorpha HOM05D006528 ORTHO05D008117 1.1e-25 119.8 78 74.4
Potri.017G042432 Populus trichocarpa HOM05D006528 ORTHO05D008117 1.8e-25 119.0 86 67.4
Pp3c17_23010 Physcomitrium patens HOM05D006528 ORTHO05D008117 3.1e-25 118.2 78 70.5
ECA236G0856 Erigeron canadensis HOM05D006528 ORTHO05D008117 2.0e-24 115.5 68 83.8
SalBow6G1122 Salvia bowleyana HOM05D006528 ORTHO05D008117 3.4e-24 114.8 140 48.6
SalBow6G4989 Salvia bowleyana HOM05D006528 ORTHO05D008117 4.4e-24 114.4 139 48.2
MCO12G136 Micromonas commoda HOM05D006528 ORTHO05D008117 1.7e-23 112.5 78 67.9
Solyc11g044230.3 Solanum lycopersicum HOM05D006528 ORTHO05D008117 4.9e-23 110.9 62 87.1
CsaV3_4G014760 Cucumis sativus L. HOM05D006528 ORTHO05D008117 6.6e-20 100.5 57 82.5
Hma1.2p1_0160F.1_g070933 Hydrangea macrophylla HOM05D006528 ORTHO05D008117 1.2e-16 89.7 57 77.2
Hma1.2p1_1174F.1_g263935 Hydrangea macrophylla HOM05D006528 ORTHO05D008117 1.2e-16 89.7 57 77.2
Hma1.2p1_1518F.1_g288560 Hydrangea macrophylla HOM05D006528 ORTHO05D008117 1.2e-16 89.7 57 77.2
PRCOL_00002361 Prasinoderma coloniale HOM05D006528 ORTHO05D008117 4.9e-15 84.3 86 50.0
Actinidia00310 Actinidia chinensis HOM05D006528 ORTHO05D008117 1.1e-11 73.2 49 73.5
Gorai.013G055100 Gossypium raimondii HOM05D006528 ORTHO05D008117 4.0e-09 64.7 40 82.5


User provided reference genes

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