Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.AX1MHW Arachis hypogaea HOM05D003837 ORTHO05D004751 3.2e-150 535.0 264 100.0
arahy.Tifrunner.gnm1.ann1.8FQY9T Arachis hypogaea HOM05D003837 ORTHO05D004751 2.1e-146 522.3 273 95.2
arahy.Tifrunner.gnm1.ann1.LGM3J9 Arachis hypogaea HOM05D003837 ORTHO05D004751 3.6e-146 521.5 273 94.9
arahy.Tifrunner.gnm1.ann1.50MGD9 Arachis hypogaea HOM05D003837 ORTHO05D004751 4.8e-146 521.2 273 95.2
arahy.Tifrunner.gnm1.ann1.MHF7VE Arachis hypogaea HOM05D003837 ORTHO05D004751 1.2e-144 516.5 273 94.1
Glyma.18G234200 Glycine max HOM05D003837 ORTHO05D004751 4.9e-135 484.6 269 87.7
Phvul.008G061600 Phaseolus vulgaris HOM05D003837 ORTHO05D004751 2.3e-132 475.7 269 85.9
Psat3g107800 Pisum sativum HOM05D003837 ORTHO05D004751 1.5e-131 473.0 269 85.5
Medtr7g077870 Medicago truncatula HOM05D003837 ORTHO05D004751 7.4e-131 470.7 269 85.1
Thecc.01G357600 Theobroma cacao HOM05D003837 ORTHO05D004751 1.4e-129 466.5 269 83.6
Ca_07930_v3 Cicer arietinum L. HOM05D003837 ORTHO05D004751 1.8e-129 466.1 281 81.5
QL04p053649 Quercus lobata HOM05D003837 ORTHO05D004751 3.1e-129 465.3 268 83.2
Duzib138G0194 Durio zibethinus HOM05D003837 ORTHO05D004751 4.1e-129 464.9 269 83.6
arahy.Tifrunner.gnm1.ann1.438NR4 Arachis hypogaea HOM05D003837 ORTHO05D004751 3.4e-128 461.8 263 90.1
arahy.Tifrunner.gnm1.ann1.I86G4G Arachis hypogaea HOM05D003837 ORTHO05D004751 3.8e-127 458.4 244 93.9
Gohir.A08G032500 Gossypium hirsutum HOM05D003837 ORTHO05D004751 3.8e-127 458.4 269 82.2
Gorai.004G042000 Gossypium raimondii HOM05D003837 ORTHO05D004751 3.8e-127 458.4 269 82.2
CiPaw.01G063000 Carya illinoinensis HOM05D003837 ORTHO05D004751 5.0e-127 458.0 269 82.2
Gohir.D08G043400 Gossypium hirsutum HOM05D003837 ORTHO05D004751 6.5e-127 457.6 269 81.8
Hma1.2p1_0780F.1_g216730 Hydrangea macrophylla HOM05D003837 ORTHO05D004751 6.5e-127 457.6 267 82.4
Cc02_g38180 Coffea canephora HOM05D003837 ORTHO05D004751 1.9e-126 456.1 269 81.8
Dinv43830 Davidia involucrata HOM05D003837 ORTHO05D004751 2.5e-126 455.7 269 81.8
CANSAT56G1308 Cannabis sativa HOM05D003837 ORTHO05D004751 5.5e-126 454.5 269 81.8
EL10Ac1g00400 Beta vulgaris HOM05D003837 ORTHO05D004751 9.3e-126 453.8 274 82.5
GSVIVG01026949001 Vitis vinifera HOM05D003837 ORTHO05D004751 1.2e-125 453.4 269 82.5
Atru.chr5.511 Acer truncatum HOM05D003837 ORTHO05D004751 1.6e-125 453.0 269 80.7
AUR62022582 Chenopodium quinoa HOM05D003837 ORTHO05D004751 1.6e-125 453.0 271 82.3
AUR62004375 Chenopodium quinoa HOM05D003837 ORTHO05D004751 2.1e-125 452.6 271 81.5
PGR042G3540 Punica granatum HOM05D003837 ORTHO05D004751 2.1e-125 452.6 270 81.1
Nitab4.5_0002811g0010 Nicotiana tabacum HOM05D003837 ORTHO05D004751 2.7e-125 452.2 269 81.0
Nitab4.5_0000386g0040 Nicotiana tabacum HOM05D003837 ORTHO05D004751 1.0e-124 450.3 269 81.0
Oeu010619.1 Olea europaea HOM05D003837 ORTHO05D004751 1.0e-124 450.3 269 80.7
Solyc10g012410.3 Solanum lycopersicum HOM05D003837 ORTHO05D004751 1.0e-124 450.3 269 81.8
Rhsim01G0163300 Rhododendron simsii HOM05D003837 ORTHO05D004751 1.3e-124 449.9 269 80.3
Sopen10g006240 Solanum pennellii HOM05D003837 ORTHO05D004751 1.3e-124 449.9 269 81.4
Ah.05g180500 Amaranthus hybridus HOM05D003837 ORTHO05D004751 1.8e-124 449.5 271 79.7
MSTRG.17276 Avicennia marina HOM05D003837 ORTHO05D004751 1.8e-124 449.5 270 78.9
AL4G45220 Arabidopsis lyrata HOM05D003837 ORTHO05D004751 3.0e-124 448.7 269 79.9
Eucgr.E01551 Eucalyptus grandis HOM05D003837 ORTHO05D004751 3.9e-124 448.4 269 79.6
PGSC0003DMG400006508 Solanum tuberosum HOM05D003837 ORTHO05D004751 3.9e-124 448.4 269 80.7
Sp4g28060 Schrenkiella parvula HOM05D003837 ORTHO05D004751 5.1e-124 448.0 269 79.6
MELO3C021202.2 Cucumis melo HOM05D003837 ORTHO05D004751 6.7e-124 447.6 270 81.1
Lj9A584G62 Lonicera japonica HOM05D003837 ORTHO05D004751 6.7e-124 447.6 268 81.0
Lalb_Chr04g0253801 Lupinus albus HOM05D003837 ORTHO05D004751 6.7e-124 447.6 268 80.2
Sed0000473 Sechium edule HOM05D003837 ORTHO05D004751 6.7e-124 447.6 269 80.7
Potri.014G086100 Populus trichocarpa HOM05D003837 ORTHO05D004751 8.7e-124 447.2 269 79.9
TAR629G3438 Trochodendron aralioides HOM05D003837 ORTHO05D004751 1.9e-123 446.0 269 79.6
ECA236G1077 Erigeron canadensis HOM05D003837 ORTHO05D004751 2.5e-123 445.7 269 78.8
Rhsim01G0190400 Rhododendron simsii HOM05D003837 ORTHO05D004751 3.3e-123 445.3 269 79.6
MBI18_g02839_MAGBIO Magnolia biondii HOM05D003837 ORTHO05D004751 4.3e-123 444.9 269 79.2
MD01G1065200 Malus domestica HOM05D003837 ORTHO05D004751 7.4e-123 444.1 269 78.4
AT2G45990 Arabidopsis thaliana HOM05D003837 ORTHO05D004751 9.7e-123 443.7 269 79.2
Thhalv10001586m.g Eutrema salsugineum HOM05D003837 ORTHO05D004751 9.7e-123 443.7 269 78.1
Lsat_1_v5_gn_7_4380 Lactuca sativa HOM05D003837 ORTHO05D004751 9.7e-123 443.7 266 79.7
Lj1g0003798 Lotus japonicus HOM05D003837 ORTHO05D004751 9.7e-123 443.7 270 80.0
Lalb_Chr10g0095951 Lupinus albus HOM05D003837 ORTHO05D004751 9.7e-123 443.7 267 79.8
Haze_15524 Corylus avellana HOM05D003837 ORTHO05D004751 1.3e-122 443.4 307 73.9
Manes.01G255600 Manihot esculenta HOM05D003837 ORTHO05D004751 1.3e-122 443.4 263 80.6
Glyma.18G234300 Glycine max HOM05D003837 ORTHO05D004751 1.6e-122 443.0 270 79.3
SalBow3G2595 Salvia bowleyana HOM05D003837 ORTHO05D004751 2.2e-122 442.6 270 78.9
TPR.G37852 Trifolium pratense HOM05D003837 ORTHO05D004751 2.2e-122 442.6 269 78.4
FAN10G2900 Fragaria x ananassa HOM05D003837 ORTHO05D004751 2.8e-122 442.2 269 78.1
Sabra14G0062400 Salix brachista HOM05D003837 ORTHO05D004751 2.8e-122 442.2 269 78.8
Carub.0004s2869 Capsella rubella HOM05D003837 ORTHO05D004751 3.7e-122 441.8 269 78.4
CAN.G116.14 Capsicum annuum HOM05D003837 ORTHO05D004751 3.7e-122 441.8 269 79.9
RcHm_v2.0_Chr1g0356141 Rosa chinensis HOM05D003837 ORTHO05D004751 4.8e-122 441.4 269 78.4
FvH4_7g14620 Fragaria vesca HOM05D003837 ORTHO05D004751 6.3e-122 441.0 269 78.1
FAN06G1674 Fragaria x ananassa HOM05D003837 ORTHO05D004751 6.3e-122 441.0 269 78.1
VMungo1383G2611 Vigna mungo HOM05D003837 ORTHO05D004751 1.1e-121 440.3 268 80.2
Medtr7g077880 Medicago truncatula HOM05D003837 ORTHO05D004751 1.4e-121 439.9 269 78.1
Migut.B01769 Erythranthe guttata HOM05D003837 ORTHO05D004751 2.4e-121 439.1 269 78.4
TPR.G37767 Trifolium pratense HOM05D003837 ORTHO05D004751 2.4e-121 439.1 269 80.7
vmacro21886 Vaccinium macrocarpon HOM05D003837 ORTHO05D004751 3.1e-121 438.7 269 78.8
vmacro23130 Vaccinium macrocarpon HOM05D003837 ORTHO05D004751 3.1e-121 438.7 269 78.8
arahy.Tifrunner.gnm1.ann1.1HB2SZ Arachis hypogaea HOM05D003837 ORTHO05D004751 6.9e-121 437.6 269 76.6
FAN01G2145 Fragaria x ananassa HOM05D003837 ORTHO05D004751 6.9e-121 437.6 269 77.3
CARHR141260 Cardamine hirsuta HOM05D003837 ORTHO05D004751 1.2e-120 436.8 269 77.3
BcaC02g12159 Brassica carinata HOM05D003837 ORTHO05D004751 1.5e-120 436.4 270 78.1
BraA05t19561Z Brassica rapa HOM05D003837 ORTHO05D004751 1.5e-120 436.4 270 78.1
Psat3g107760 Pisum sativum HOM05D003837 ORTHO05D004751 1.5e-120 436.4 269 77.7
FAN10G2259 Fragaria x ananassa HOM05D003837 ORTHO05D004751 2.0e-120 436.0 275 76.4
arahy.Tifrunner.gnm1.ann1.SJDP6S Arachis hypogaea HOM05D003837 ORTHO05D004751 2.6e-120 435.6 269 76.6
FAN03G2321 Fragaria x ananassa HOM05D003837 ORTHO05D004751 3.4e-120 435.3 275 76.4
FAN06G4414 Fragaria x ananassa HOM05D003837 ORTHO05D004751 5.9e-120 434.5 275 76.4
A05p05980 Brassica napus HOM05D003837 ORTHO05D004751 1.0e-119 433.7 270 77.8
Aa31LG1G27400 Aethionema arabicum HOM05D003837 ORTHO05D004751 1.3e-119 433.3 269 76.6
unitig_61.g26385 Utricularia gibba HOM05D003837 ORTHO05D004751 1.7e-119 433.0 271 76.4
Actinidia02836 Actinidia chinensis HOM05D003837 ORTHO05D004751 2.2e-119 432.6 266 80.1
C04p06910 Brassica napus HOM05D003837 ORTHO05D004751 6.5e-119 431.0 270 77.4
Ca_07931_v3 Cicer arietinum L. HOM05D003837 ORTHO05D004751 1.1e-118 430.3 269 76.2
FAN01G0904 Fragaria x ananassa HOM05D003837 ORTHO05D004751 1.4e-118 429.9 269 77.0
CANSAT56G2444 Cannabis sativa HOM05D003837 ORTHO05D004751 1.9e-118 429.5 269 78.1
Ciclev10021689m.g Citrus clementina HOM05D003837 ORTHO05D004751 1.9e-118 429.5 269 76.2
Migut.B01768 Erythranthe guttata HOM05D003837 ORTHO05D004751 2.5e-118 429.1 271 77.1
VMungo1383G0868 Vigna mungo HOM05D003837 ORTHO05D004751 7.2e-118 427.6 265 79.6
BolC4t22312H Brassica oleracea HOM05D003837 ORTHO05D004751 4.6e-117 424.9 286 73.1
Phvul.008G061500 Phaseolus vulgaris HOM05D003837 ORTHO05D004751 6.1e-117 424.5 267 77.9
PSO017G1131 Papaver somniferum HOM05D003837 ORTHO05D004751 3.9e-116 421.8 269 73.6
Prupe.2G172200 Prunus persica HOM05D003837 ORTHO05D004751 2.5e-115 419.1 269 76.2
DCAR_025196 Daucus carota HOM05D003837 ORTHO05D004751 5.7e-115 417.9 269 76.6
Ciclev10021690m.g Citrus clementina HOM05D003837 ORTHO05D004751 7.4e-115 417.5 269 75.5
Cfa003906 Carpinus fangiana HOM05D003837 ORTHO05D004751 4.8e-114 414.8 252 81.7
FvH4_7g14540 Fragaria vesca HOM05D003837 ORTHO05D004751 4.1e-113 411.8 269 75.1
Ca_07932_v3 Cicer arietinum L. HOM05D003837 ORTHO05D004751 5.3e-113 411.4 260 75.8
THA.LOC104802037 Tarenaya hassleriana HOM05D003837 ORTHO05D004751 1.2e-112 410.2 269 75.1
Cpa.g.sc11.20 Carica papaya HOM05D003837 ORTHO05D004751 2.0e-112 409.5 272 74.3
PSO063G2236 Papaver somniferum HOM05D003837 ORTHO05D004751 2.0e-112 409.5 261 73.6
HPP92_025965 Vanilla planifolia HOM05D003837 ORTHO05D004751 3.4e-112 408.7 269 72.9
ClCG06G003610 Citrullus lanatus HOM05D003837 ORTHO05D004751 4.5e-112 408.3 269 74.7
CsaV3_6G000640 Cucumis sativus L. HOM05D003837 ORTHO05D004751 1.0e-111 407.1 269 75.1
Zm00001eb094870 Zea mays HOM05D003837 ORTHO05D004751 2.2e-111 406.0 268 70.5
Os07g0418000 Oryza sativa ssp. japonica HOM05D003837 ORTHO05D004751 8.5e-111 404.1 268 70.5
TWI14G0320 Tripterygium wilfordii HOM05D003837 ORTHO05D004751 1.4e-110 403.3 269 73.6
RcHm_v2.0_Chr1g0356101 Rosa chinensis HOM05D003837 ORTHO05D004751 7.2e-110 401.0 269 72.9
Hund27264 Selenicereus undatus HOM05D003837 ORTHO05D004751 2.1e-109 399.4 269 71.7
COL.COLO4_12726 Corchorus olitorius HOM05D003837 ORTHO05D004751 2.7e-109 399.1 269 75.1
FAN06G3658 Fragaria x ananassa HOM05D003837 ORTHO05D004751 2.7e-109 399.1 269 73.2
HanXRQChr04g0121181 Helianthus annuus HOM05D003837 ORTHO05D004751 6.1e-109 397.9 269 71.4
SEGI_21942 Sequoiadendron giganteum HOM05D003837 ORTHO05D004751 1.0e-108 397.1 269 68.4
FAN16G2327 Fragaria x ananassa HOM05D003837 ORTHO05D004751 5.1e-108 394.8 274 68.6
CDE05G2325 Ceratophyllum demersum HOM05D003837 ORTHO05D004751 6.7e-108 394.4 266 71.4
FvH4_3g44250 Fragaria vesca HOM05D003837 ORTHO05D004751 2.6e-107 392.5 274 68.2
FAN06G3536 Fragaria x ananassa HOM05D003837 ORTHO05D004751 2.6e-107 392.5 279 67.0
FAN10G0266 Fragaria x ananassa HOM05D003837 ORTHO05D004751 5.7e-107 391.3 273 68.5
Lj1g0022323 Lotus japonicus HOM05D003837 ORTHO05D004751 7.4e-107 391.0 237 81.9
FAN06G0309 Fragaria x ananassa HOM05D003837 ORTHO05D004751 9.7e-107 390.6 269 71.7
FAN11G2601 Fragaria x ananassa HOM05D003837 ORTHO05D004751 9.7e-107 390.6 274 67.9
FAN10G3579 Fragaria x ananassa HOM05D003837 ORTHO05D004751 1.7e-106 389.8 273 68.1
FAN01G2925 Fragaria x ananassa HOM05D003837 ORTHO05D004751 4.8e-106 388.3 279 67.0
FAN06G3952 Fragaria x ananassa HOM05D003837 ORTHO05D004751 1.6e-104 383.3 276 67.0
Peaxi162Scf00008g02421 Petunia axillaris HOM05D003837 ORTHO05D004751 4.5e-104 381.7 269 72.1
SMO118G0280 Selaginella moellendorffii HOM05D003837 ORTHO05D004751 4.5e-104 381.7 272 67.3
Nn1g01565 Nelumbo nucifera HOM05D003837 ORTHO05D004751 1.3e-103 380.2 269 69.9
ATR0680G377 Amborella trichopoda HOM05D003837 ORTHO05D004751 5.0e-103 378.3 235 76.2
Pp3c11_2170 Physcomitrium patens HOM05D003837 ORTHO05D004751 1.9e-102 376.3 270 66.7
AagrBONN_evm.TU.Sc2ySwM_228.2910 Anthoceros agrestis HOM05D003837 ORTHO05D004751 2.1e-101 372.9 270 65.6
HanXRQChr04g0121171 Helianthus annuus HOM05D003837 ORTHO05D004751 3.6e-101 372.1 269 66.9
Pp3c23_10590 Physcomitrium patens HOM05D003837 ORTHO05D004751 3.6e-101 372.1 271 66.4
RcHm_v2.0_Chr1g0356011 Rosa chinensis HOM05D003837 ORTHO05D004751 6.1e-101 371.3 270 65.6
AagrBONN_evm.TU.Sc2ySwM_228.5133 Anthoceros agrestis HOM05D003837 ORTHO05D004751 2.6e-99 365.9 269 64.3
RcHm_v2.0_Chr1g0356041 Rosa chinensis HOM05D003837 ORTHO05D004751 4.4e-99 365.2 270 64.8
RcHm_v2.0_Chr1g0356051 Rosa chinensis HOM05D003837 ORTHO05D004751 1.7e-98 363.2 271 65.7
Mapoly0002s0196 Marchantia polymorpha HOM05D003837 ORTHO05D004751 3.7e-98 362.1 270 64.1
RcHm_v2.0_Chr1g0355961 Rosa chinensis HOM05D003837 ORTHO05D004751 1.1e-97 360.5 271 64.6
Atru.chr5.512 Acer truncatum HOM05D003837 ORTHO05D004751 1.2e-96 357.1 212 80.7
Glyma.09G258500 Glycine max HOM05D003837 ORTHO05D004751 1.5e-91 340.1 214 81.3
Pp3c24_7060 Physcomitrium patens HOM05D003837 ORTHO05D004751 7.5e-91 337.8 249 65.1
Actinidia02835 Actinidia chinensis HOM05D003837 ORTHO05D004751 5.4e-89 331.6 192 83.3
AUR62004376 Chenopodium quinoa HOM05D003837 ORTHO05D004751 3.5e-88 328.9 211 76.8
Sc26g0000870 Simmondsia chinensis HOM05D003837 ORTHO05D004751 5.0e-87 325.1 184 82.6
CBR_g30756 Chara braunii HOM05D003837 ORTHO05D004751 4.0e-84 315.5 295 54.6
FAN10G2608 Fragaria x ananassa HOM05D003837 ORTHO05D004751 6.8e-84 314.7 186 78.0
SMO118G0457 Selaginella moellendorffii HOM05D003837 ORTHO05D004751 3.2e-73 279.3 269 52.4
CSS0003015 Camellia sinensis var. sinensis HOM05D003837 ORTHO05D004751 6.6e-63 245.0 189 64.0
FAN10G2382 Fragaria x ananassa HOM05D003837 ORTHO05D004751 5.4e-57 225.3 133 76.7
Glyma.09G258400 Glycine max HOM05D003837 ORTHO05D004751 1.2e-56 224.2 128 81.2
Cre06.g278117 Chlamydomonas reinhardtii HOM05D003837 ORTHO05D004751 2.3e-55 219.9 271 42.4
FvH4_7g14570 Fragaria vesca HOM05D003837 ORTHO05D004751 6.2e-53 211.8 143 73.4
vmacro20932 Vaccinium macrocarpon HOM05D003837 ORTHO05D004751 2.4e-49 199.9 181 59.1
MCO05G263 Micromonas commoda HOM05D003837 ORTHO05D004751 1.6e-48 197.2 267 40.4
RcHm_v2.0_Chr1g0356441 Rosa chinensis HOM05D003837 ORTHO05D004751 7.3e-46 188.3 188 56.9
SGA_v2.0_scaffold95G28830 Striga asiatica HOM05D003837 ORTHO05D004751 4.4e-43 179.1 260 41.2
Cre13.g578900 Chlamydomonas reinhardtii HOM05D003837 ORTHO05D004751 4.3e-38 162.5 278 35.3
arahy.Tifrunner.gnm1.ann1.B43A3C Arachis hypogaea HOM05D003837 ORTHO05D004751 3.4e-35 152.9 95 71.6
Glyma.04G165300 Glycine max HOM05D003837 ORTHO05D004751 2.9e-34 149.8 100 76.0
FvH4_7g14571 Fragaria vesca HOM05D003837 ORTHO05D004751 4.9e-34 149.1 88 77.3
MD09G1245400 Malus domestica HOM05D003837 ORTHO05D004751 7.1e-33 145.2 82 81.7
arahy.Tifrunner.gnm1.ann1.DBMD67 Arachis hypogaea HOM05D003837 ORTHO05D004751 1.5e-27 127.5 68 86.8
Actinidia37295 Actinidia chinensis HOM05D003837 ORTHO05D004751 2.3e-23 113.6 69 78.3
RcHm_v2.0_Chr1g0356021 Rosa chinensis HOM05D003837 ORTHO05D004751 3.0e-23 113.2 99 58.6
MD09G1245300 Malus domestica HOM05D003837 ORTHO05D004751 1.5e-22 110.9 77 70.1
Ciclev10006592m.g Citrus clementina HOM05D003837 ORTHO05D033091 2.8e-21 106.7 67 67.2
Ciclev10013186m.g Citrus clementina HOM05D003837 ORTHO05D004751 5.5e-17 92.4 82 56.1
A06p08350 Brassica napus HOM05D003837 ORTHO05D099682 4.3e-14 82.8 65 61.5
AUR62043290 Chenopodium quinoa HOM05D008055 ORTHO05D009927 7.4e-14 82.0 60 63.3
A05p05950 Brassica napus HOM05D003837 ORTHO05D033091 2.8e-13 80.1 49 73.5
BraA05t19558Z Brassica rapa HOM05D003837 ORTHO05D033091 2.8e-13 80.1 49 73.5
BolC7t40474H Brassica oleracea HOM05D003837 ORTHO05D033622 4.1e-12 76.3 57 64.9
BolC9t54120H Brassica oleracea HOM05D003837 ORTHO05D033622 6.9e-12 75.5 57 64.9
C09p56440 Brassica napus HOM05D003837 ORTHO05D101394 1.2e-08 64.7 50 64.0
Ciclev10003222m.g Citrus clementina HOM05D003684 ORTHO05D004428 2.1e-08 63.9 44 63.6


User provided reference genes

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