Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.AWLH2F Arachis hypogaea HOM05D006962 ORTHO05D008696 1.8e-103 379.4 212 100.0
Ca_16448_v3 Cicer arietinum L. HOM05D006962 ORTHO05D008696 1.1e-41 174.1 205 52.2
Lj6g0020338 Lotus japonicus HOM05D006962 ORTHO05D008696 3.7e-40 169.1 202 52.0
Glyma.18G005200 Glycine max HOM05D006962 ORTHO05D008696 7.7e-38 161.4 190 49.5
Medtr3g085060 Medicago truncatula HOM05D006962 ORTHO05D008696 2.9e-37 159.5 197 48.7
Psat5g097440 Pisum sativum HOM05D006962 ORTHO05D008696 3.2e-36 156.0 201 48.3
Phvul.001G262900 Phaseolus vulgaris HOM05D006962 ORTHO05D008696 8.8e-34 147.9 193 46.1
VMungo1383G1469 Vigna mungo HOM05D006962 ORTHO05D008696 2.2e-32 143.3 198 44.4
TPR.G17769 Trifolium pratense HOM05D006962 ORTHO05D008696 7.0e-31 138.3 215 42.3
QL03p052240 Quercus lobata HOM05D006962 ORTHO05D008696 2.2e-29 133.3 209 44.0
CiPaw.05G108100 Carya illinoinensis HOM05D006962 ORTHO05D008696 6.5e-29 131.7 214 43.5
Ciclev10032798m.g Citrus clementina HOM05D006962 ORTHO05D008696 2.5e-28 129.8 204 41.2
Dinv17575 Davidia involucrata HOM05D006962 ORTHO05D008696 6.1e-27 125.2 215 42.8
Manes.13G010300 Manihot esculenta HOM05D006962 ORTHO05D008696 8.0e-27 124.8 195 41.5
Lalb_Chr23g0278151 Lupinus albus HOM05D006962 ORTHO05D008696 1.0e-26 124.4 195 42.1
Potri.003G170700 Populus trichocarpa HOM05D006962 ORTHO05D008696 2.3e-26 123.2 199 39.2
Cfa009377 Carpinus fangiana HOM05D006962 ORTHO05D008696 4.0e-26 122.5 221 39.4
Peaxi162Scf00128g01332 Petunia axillaris HOM05D006962 ORTHO05D008696 1.2e-25 120.9 224 39.7
Gohir.A04G140400 Gossypium hirsutum HOM05D006962 ORTHO05D008696 2.6e-25 119.8 210 37.6
Sabra01G0041700 Salix brachista HOM05D000660 ORTHO05D000766 3.4e-25 119.4 169 49.7
Glyma.11G251800 Glycine max HOM05D006962 ORTHO05D008696 9.8e-25 117.9 155 48.4
Thecc.02G205200 Theobroma cacao HOM05D006962 ORTHO05D008696 9.8e-25 117.9 212 42.9
TWI75G0385 Tripterygium wilfordii HOM05D006962 ORTHO05D008696 9.8e-25 117.9 210 37.1
Gohir.D04G183600 Gossypium hirsutum HOM05D006962 ORTHO05D008696 3.7e-24 115.9 209 37.8
Nitab4.5_0006369g0010 Nicotiana tabacum HOM05D006962 ORTHO05D008696 3.7e-24 115.9 217 37.8
Gorai.012G176600 Gossypium raimondii HOM05D006962 ORTHO05D008696 6.3e-24 115.2 209 37.3
Haze_12436 Corylus avellana HOM05D006962 ORTHO05D008696 1.4e-23 114.0 170 44.1
Prupe.1G224100 Prunus persica HOM05D006962 ORTHO05D008696 1.8e-23 113.6 202 37.1
CANSAT01G0828 Cannabis sativa HOM05D006962 ORTHO05D008696 2.4e-23 113.2 211 38.9
ClCG06G002190 Citrullus lanatus HOM05D006962 ORTHO05D008696 2.4e-23 113.2 200 40.0
Potri.001G057700 Populus trichocarpa HOM05D006962 ORTHO05D008696 4.1e-23 112.5 161 43.5
CSS0033119 Camellia sinensis var. sinensis HOM05D006962 ORTHO05D008696 5.4e-23 112.1 209 37.3
Solyc05g015640.3 Solanum lycopersicum HOM05D006962 ORTHO05D008696 7.0e-23 111.7 211 35.5
Duzib251G0823 Durio zibethinus HOM05D006962 ORTHO05D008696 9.1e-23 111.3 200 39.5
Nitab4.5_0000996g0010 Nicotiana tabacum HOM05D006962 ORTHO05D008696 5.9e-22 108.6 215 34.9
Sabra03G0124800 Salix brachista HOM05D006962 ORTHO05D008696 5.9e-22 108.6 197 36.0
Cc11_g17050 Coffea canephora HOM05D006962 ORTHO05D008696 7.7e-22 108.2 230 34.8
MELO3C022311.2 Cucumis melo HOM05D006962 ORTHO05D008696 7.7e-22 108.2 200 39.0
Nn3g16434 Nelumbo nucifera HOM05D006962 ORTHO05D008696 1.3e-21 107.5 208 36.5
TAR629G1477 Trochodendron aralioides HOM05D006962 ORTHO05D008696 1.7e-21 107.1 209 39.2
Hma1.2p1_0657F.1_g197165 Hydrangea macrophylla HOM05D006962 ORTHO05D008696 5.0e-21 105.5 107 51.4
Hma1.2p1_0967F.1_g242360 Hydrangea macrophylla HOM05D006962 ORTHO05D008696 5.0e-21 105.5 107 51.4
Sopen05g011100 Solanum pennellii HOM05D006962 ORTHO05D008696 5.0e-21 105.5 200 36.0
PGSC0003DMG400034312 Solanum tuberosum HOM05D006962 ORTHO05D008696 6.5e-21 105.1 212 34.9
TAR636G2109 Trochodendron aralioides HOM05D006962 ORTHO05D008696 6.5e-21 105.1 167 45.5
PGR102G1052 Punica granatum HOM05D006962 ORTHO05D008696 1.1e-20 104.4 163 41.1
GSVIVG01010505001 Vitis vinifera HOM05D006962 ORTHO05D008696 1.1e-20 104.4 204 35.3
Lsat_1_v5_gn_4_641 Lactuca sativa HOM05D006962 ORTHO05D008696 3.2e-20 102.8 98 51.0
MSTRG.13306 Avicennia marina HOM05D006962 ORTHO05D008696 9.4e-20 101.3 214 34.1
Eucgr.B03508 Eucalyptus grandis HOM05D006962 ORTHO05D008696 1.2e-19 100.9 225 35.6
HanXRQChr08g0214941 Helianthus annuus HOM05D006962 ORTHO05D008696 1.2e-19 100.9 147 40.1
Atru.chr11.2343 Acer truncatum HOM05D006962 ORTHO05D008696 1.6e-19 100.5 139 50.4
COL.COLO4_20424 Corchorus olitorius HOM05D006962 ORTHO05D008696 2.1e-19 100.1 210 35.7
Sc14g0009120 Simmondsia chinensis HOM05D006962 ORTHO05D008696 2.1e-19 100.1 195 37.4
CAN.G1124.2 Capsicum annuum HOM05D006962 ORTHO05D008696 8.0e-19 98.2 151 38.4
Cpa.g.sc43.75 Carica papaya HOM05D006962 ORTHO05D008696 8.0e-19 98.2 181 36.5
Gohir.D02G147600 Gossypium hirsutum HOM05D006962 ORTHO05D008696 1.4e-18 97.4 193 37.3
Gohir.A03G124600 Gossypium hirsutum HOM05D006962 ORTHO05D008696 1.8e-18 97.1 200 37.5
CsaV3_6G008260 Cucumis sativus L. HOM05D006962 ORTHO05D008696 2.3e-18 96.7 161 41.6
RcHm_v2.0_Chr4g0429971 Rosa chinensis HOM05D006962 ORTHO05D008696 5.2e-18 95.5 195 34.4
FvH4_4g23570 Fragaria vesca HOM05D006962 ORTHO05D008696 1.5e-17 94.0 204 34.8
MD16G1121100 Malus domestica HOM05D006962 ORTHO05D008696 1.5e-17 94.0 205 33.7
THA.LOC104807506 Tarenaya hassleriana HOM05D006962 ORTHO05D008696 2.0e-17 93.6 219 33.3
Actinidia08062 Actinidia chinensis HOM05D006962 ORTHO05D008696 4.4e-17 92.4 148 39.9
Gorai.005G165400 Gossypium raimondii HOM05D006962 ORTHO05D008696 5.7e-17 92.0 197 35.0
TAR629G0477 Trochodendron aralioides HOM05D006962 ORTHO05D008696 1.7e-16 90.5 73 67.1
ClCG07G015460 Citrullus lanatus HOM05D006962 ORTHO05D008696 2.2e-16 90.1 159 35.8
Glyma.01G130700 Glycine max HOM05D006962 ORTHO05D008696 1.1e-15 87.8 117 46.2
MBI07_g28246_MAGBIO Magnolia biondii HOM05D006962 ORTHO05D008696 1.4e-15 87.4 195 31.8
A09p38640 Brassica napus HOM05D006962 ORTHO05D008696 1.8e-15 87.0 161 37.3
BraA09t39370Z Brassica rapa HOM05D006962 ORTHO05D008696 1.8e-15 87.0 161 37.3
MBI07_g11269_MAGBIO Magnolia biondii HOM05D006962 ORTHO05D008696 1.8e-15 87.0 194 32.5
ECA234G1956 Erigeron canadensis HOM05D006962 ORTHO05D008696 3.1e-15 86.3 61 62.3
Sed0011154 Sechium edule HOM05D006962 ORTHO05D008696 3.1e-15 86.3 131 42.0
Ah.03g136040 Amaranthus hybridus HOM05D006962 ORTHO05D008696 4.1e-15 85.9 159 35.8
Rhsim12G0024900 Rhododendron simsii HOM05D006962 ORTHO05D008696 4.1e-15 85.9 195 33.3
AUR62028912 Chenopodium quinoa HOM05D006962 ORTHO05D008696 5.4e-15 85.5 182 37.4
PSO017G7099 Papaver somniferum HOM05D006962 ORTHO05D008696 5.4e-15 85.5 181 33.1
C07p17910 Brassica napus HOM05D006962 ORTHO05D008696 7.0e-15 85.1 159 35.8
PSO478G2808 Papaver somniferum HOM05D006962 ORTHO05D008696 7.0e-15 85.1 175 34.3
BolC7t42297H Brassica oleracea HOM05D006962 ORTHO05D008696 9.2e-15 84.7 159 35.8
CDE05G3434 Ceratophyllum demersum HOM05D006962 ORTHO05D008696 9.2e-15 84.7 172 32.6
AUR62005637 Chenopodium quinoa HOM05D006962 ORTHO05D008696 9.2e-15 84.7 181 34.8
CsaV3_4G003050 Cucumis sativus L. HOM05D006962 ORTHO05D008696 9.2e-15 84.7 185 30.8
BcaC05g26545 Brassica carinata HOM05D006962 ORTHO05D008696 1.6e-14 84.0 162 37.7
BolC5t31319H Brassica oleracea HOM05D006962 ORTHO05D008696 2.0e-14 83.6 162 37.0
MELO3C032628.2 Cucumis melo HOM05D006962 ORTHO05D008696 2.0e-14 83.6 136 35.3
DCAR_007000 Daucus carota HOM05D006962 ORTHO05D008696 4.5e-14 82.4 168 32.7
C05p26000 Brassica napus HOM05D006962 ORTHO05D008696 5.9e-14 82.0 162 36.4
Migut.E00010 Erythranthe guttata HOM05D006962 ORTHO05D008696 2.3e-13 80.1 164 31.7
Aqoxy3G01577 Aquilegia oxysepala HOM05D006962 ORTHO05D008696 2.9e-13 79.7 153 37.9
AL1G40700 Arabidopsis lyrata HOM05D006962 ORTHO05D008696 3.8e-13 79.3 167 34.7
HPP92_023534 Vanilla planifolia HOM05D006962 ORTHO05D008696 5.0e-13 79.0 130 38.5
BcaC05g26736 Brassica carinata HOM05D006962 ORTHO05D008696 1.1e-12 77.8 160 35.0
Thhalv10008828m.g Eutrema salsugineum HOM05D006962 ORTHO05D008696 1.1e-12 77.8 159 34.6
Hund25473 Selenicereus undatus HOM05D006962 ORTHO05D008696 1.5e-12 77.4 172 33.1
Aa31LG7G9900 Aethionema arabicum HOM05D006962 ORTHO05D008696 3.3e-12 76.3 157 32.5
BcaNung06812 Brassica carinata HOM05D006962 ORTHO05D008696 4.3e-12 75.9 160 33.8
Gohir.D03G043133 Gossypium hirsutum HOM05D006962 ORTHO05D008696 5.6e-12 75.5 78 47.4
ATR0561G196 Amborella trichopoda HOM05D006962 ORTHO05D008696 1.6e-11 73.9 106 34.9
Carub.0001s2583 Capsella rubella HOM05D006962 ORTHO05D008696 3.6e-11 72.8 60 53.3
Gorai.003G044100 Gossypium raimondii HOM05D006962 ORTHO05D008696 1.0e-10 71.2 80 47.5
Sp1g23540 Schrenkiella parvula HOM05D006962 ORTHO05D008696 1.8e-10 70.5 162 31.5
SGA_v2.0_scaffold87G27164 Striga asiatica HOM05D006962 ORTHO05D008696 1.8e-10 70.5 63 57.1
Zm00001eb180910 Zea mays HOM05D006962 ORTHO05D008696 1.8e-10 70.5 68 50.0
BcaB03g14005 Brassica carinata HOM05D006962 ORTHO05D008696 4.0e-10 69.3 158 33.5
CARHR026870 Cardamine hirsuta HOM05D006962 ORTHO05D008696 4.0e-10 69.3 162 32.7
Os02g0509600 Oryza sativa ssp. japonica HOM05D006962 ORTHO05D008696 2.0e-09 67.0 149 31.5
A07p11980 Brassica napus HOM05D006962 ORTHO05D008696 4.4e-09 65.9 161 32.3
BraA07t28983Z Brassica rapa HOM05D006962 ORTHO05D008696 1.3e-08 64.3 159 32.1
Zm00001eb241800 Zea mays HOM05D006962 ORTHO05D008696 2.9e-08 63.2 169 30.8
AT1G27300 Arabidopsis thaliana HOM05D006962 ORTHO05D008696 2.4e-07 60.1 172 30.2


User provided reference genes

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