Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.ASZ0YV Arachis hypogaea HOM05D005170 ORTHO05D006985 9.0e-75 283.5 142 100.0
arahy.Tifrunner.gnm1.ann1.3DLK77 Arachis hypogaea HOM05D005170 ORTHO05D006985 2.8e-52 208.8 112 92.9
arahy.Tifrunner.gnm1.ann1.66GFWV Arachis hypogaea HOM05D005170 ORTHO05D006985 2.8e-52 208.8 112 92.9
arahy.Tifrunner.gnm1.ann1.NM7AU0 Arachis hypogaea HOM05D005170 ORTHO05D006985 4.1e-51 204.9 112 91.1
arahy.Tifrunner.gnm1.ann1.5GV78D Arachis hypogaea HOM05D005170 ORTHO05D006985 2.5e-48 195.7 107 89.7
arahy.Tifrunner.gnm1.ann1.QEN3W4 Arachis hypogaea HOM05D005170 ORTHO05D006985 6.1e-47 191.0 136 75.0
arahy.Tifrunner.gnm1.ann1.87D3N1 Arachis hypogaea HOM05D005170 ORTHO05D006985 8.2e-44 180.6 112 83.9
Lalb_Chr10g0092611 Lupinus albus HOM05D005170 ORTHO05D006985 5.0e-33 144.8 113 68.1
Glyma.18G276300 Glycine max HOM05D005170 ORTHO05D006985 5.5e-32 141.4 113 67.3
TPR.G3272 Trifolium pratense HOM05D005170 ORTHO05D006985 1.2e-31 140.2 113 65.5
Lj1g0005667 Lotus japonicus HOM05D005170 ORTHO05D006985 6.1e-31 137.9 107 65.4
Medtr7g017500 Medicago truncatula HOM05D005170 ORTHO05D006985 1.0e-30 137.1 111 64.9
Glyma.08G253900 Glycine max HOM05D005170 ORTHO05D006985 7.5e-29 131.0 112 59.8
Psat3g194480 Pisum sativum HOM05D005170 ORTHO05D006985 7.5e-29 131.0 111 62.2
Ca_06959_v3 Cicer arietinum L. HOM05D005170 ORTHO05D006985 2.4e-27 125.9 93 71.0
Phvul.008G024500 Phaseolus vulgaris HOM05D005170 ORTHO05D006985 7.0e-27 124.4 109 63.3
VMungo1383G1046 Vigna mungo HOM05D005170 ORTHO05D006985 3.8e-25 118.6 96 65.6
arahy.Tifrunner.gnm1.ann1.KW7YJP Arachis hypogaea HOM05D005170 ORTHO05D006985 2.5e-24 115.9 82 74.4
Cfa007711 Carpinus fangiana HOM05D005170 ORTHO05D006985 1.1e-16 90.5 102 52.0
Prupe.3G247200 Prunus persica HOM05D005170 ORTHO05D006985 5.5e-16 88.2 110 48.2
Manes.01G104800 Manihot esculenta HOM05D005170 ORTHO05D006985 1.2e-15 87.0 114 43.0
Potri.004G111500 Populus trichocarpa HOM05D005170 ORTHO05D006985 2.8e-15 85.9 118 46.6
MD09G1076900 Malus domestica HOM05D005170 ORTHO05D006985 4.7e-15 85.1 104 45.2
CiPaw.03G081400 Carya illinoinensis HOM05D005170 ORTHO05D006985 1.0e-14 84.0 125 44.0
COL.COLO4_00229 Corchorus olitorius HOM05D005170 ORTHO05D006985 1.0e-14 84.0 119 41.2
FAN05G5078 Fragaria x ananassa HOM05D005170 ORTHO05D006985 1.0e-14 84.0 125 43.2
CAN.G497.45 Capsicum annuum HOM05D005170 ORTHO05D006985 1.8e-14 83.2 110 44.5
QL02p064885 Quercus lobata HOM05D005170 ORTHO05D006985 1.8e-14 83.2 106 49.1
Sabra04G0072900 Salix brachista HOM05D005170 ORTHO05D006985 1.8e-14 83.2 119 44.5
Gohir.D07G185600 Gossypium hirsutum HOM05D005170 ORTHO05D006985 3.0e-14 82.4 119 41.2
FAN09G2425 Fragaria x ananassa HOM05D005170 ORTHO05D006985 5.2e-14 81.6 108 47.2
Hma1.2p1_2186F.1_g316400 Hydrangea macrophylla HOM05D005170 ORTHO05D006985 8.9e-14 80.9 103 46.6
Gorai.001G206200 Gossypium raimondii HOM05D005170 ORTHO05D006985 1.2e-13 80.5 119 42.0
FvH4_6g46110 Fragaria vesca HOM05D005170 ORTHO05D006985 1.5e-13 80.1 108 48.1
FAN14G1739 Fragaria x ananassa HOM05D005170 ORTHO05D006985 1.5e-13 80.1 108 48.1
Peaxi162Scf00020g02131 Petunia axillaris HOM05D005170 ORTHO05D006985 2.6e-13 79.3 107 44.9
Nitab4.5_0002978g0100 Nicotiana tabacum HOM05D005170 ORTHO05D006985 3.4e-13 79.0 112 43.8
Sc11g0008940 Simmondsia chinensis HOM05D005170 ORTHO05D006985 3.4e-13 79.0 113 42.5
Thecc.04G110100 Theobroma cacao HOM05D005170 ORTHO05D006985 4.4e-13 78.6 119 42.0
Solyc02g089360.4 Solanum lycopersicum HOM05D005170 ORTHO05D006985 5.7e-13 78.2 110 41.8
Gohir.A07G178500 Gossypium hirsutum HOM05D005170 ORTHO05D006985 7.5e-13 77.8 105 45.7
PGSC0003DMG400001473 Solanum tuberosum HOM05D005170 ORTHO05D006985 9.8e-13 77.4 110 40.9
Dinv34895 Davidia involucrata HOM05D005170 ORTHO05D006985 1.3e-12 77.0 105 43.8
Lj4A126T71 Lonicera japonica HOM05D005170 ORTHO05D006985 1.3e-12 77.0 102 45.1
Sopen02g034140 Solanum pennellii HOM05D005170 ORTHO05D006985 1.7e-12 76.6 110 40.9
CSS0017694 Camellia sinensis var. sinensis HOM05D005170 ORTHO05D006985 2.2e-12 76.3 103 43.7
CSS0024263 Camellia sinensis var. sinensis HOM05D005170 ORTHO05D006985 2.2e-12 76.3 103 43.7
RcHm_v2.0_Chr2g0164441 Rosa chinensis HOM05D005170 ORTHO05D006985 3.7e-12 75.5 108 45.4
ClCG07G016130 Citrullus lanatus HOM05D005170 ORTHO05D006985 4.9e-12 75.1 113 42.5
HPP92_019180 Vanilla planifolia HOM05D005170 ORTHO05D006985 4.9e-12 75.1 91 45.1
Nn4g23569 Nelumbo nucifera HOM05D005170 ORTHO05D006985 8.3e-12 74.3 88 45.5
Ah.16g100870 Amaranthus hybridus HOM05D005170 ORTHO05D006985 1.1e-11 73.9 100 44.0
CANSAT64G0674 Cannabis sativa HOM05D005170 ORTHO05D006985 1.4e-11 73.6 101 40.6
Cpa.g.sc14.254 Carica papaya HOM05D005170 ORTHO05D006985 1.4e-11 73.6 111 41.4
RcHm_v2.0_Chr2g0164481 Rosa chinensis HOM05D005170 ORTHO05D006985 1.4e-11 73.6 108 44.4
Sed0018763 Sechium edule HOM05D005170 ORTHO05D006985 1.4e-11 73.6 114 40.4
Nitab4.5_0002171g0080 Nicotiana tabacum HOM05D005170 ORTHO05D006985 1.8e-11 73.2 98 46.9
Actinidia36275 Actinidia chinensis HOM05D005170 ORTHO05D006985 2.4e-11 72.8 111 42.3
FAN02G2580 Fragaria x ananassa HOM05D005170 ORTHO05D006985 2.4e-11 72.8 108 42.6
TWI34G1112 Tripterygium wilfordii HOM05D005170 ORTHO05D006985 3.1e-11 72.4 94 51.1
CsaV3_4G009930 Cucumis sativus L. HOM05D005170 ORTHO05D006985 1.2e-10 70.5 110 40.9
GSVIVG01036517001 Vitis vinifera HOM05D005170 ORTHO05D006985 1.2e-10 70.5 107 41.1
PGR004G2610 Punica granatum HOM05D005170 ORTHO05D006985 1.6e-10 70.1 101 43.6
Cc07_g04630 Coffea canephora HOM05D005170 ORTHO05D006985 2.0e-10 69.7 93 46.2
MELO3C018906.2 Cucumis melo HOM05D005170 ORTHO05D006985 2.0e-10 69.7 101 42.6
Ciclev10011153m.g Citrus clementina HOM05D005170 ORTHO05D006985 3.5e-10 68.9 109 41.3
PSO339G2512 Papaver somniferum HOM05D005170 ORTHO05D006985 3.5e-10 68.9 93 41.9
Hund16252 Selenicereus undatus HOM05D005170 ORTHO05D006985 3.5e-10 68.9 87 46.0
EL10Ac2g04408 Beta vulgaris HOM05D005170 ORTHO05D006985 5.9e-10 68.2 86 43.0
vmacro05605 Vaccinium macrocarpon HOM05D005170 ORTHO05D006985 7.8e-10 67.8 110 41.8
vmacro17105 Vaccinium macrocarpon HOM05D005170 ORTHO05D006985 7.8e-10 67.8 110 41.8
vmacro23470 Vaccinium macrocarpon HOM05D005170 ORTHO05D006985 7.8e-10 67.8 110 41.8
HanXRQChr12g0380201 Helianthus annuus HOM05D005170 ORTHO05D006985 1.3e-09 67.0 97 46.4
SGA_v2.0_scaffold52G19060 Striga asiatica HOM05D005170 ORTHO05D006985 1.3e-09 67.0 99 42.4
AUR62023134 Chenopodium quinoa HOM05D005170 ORTHO05D006985 3.8e-09 65.5 120 32.5
Oeu062190.2 Olea europaea HOM05D005170 ORTHO05D006985 3.8e-09 65.5 112 39.3
THA.LOC104805534 Tarenaya hassleriana HOM05D005170 ORTHO05D006985 5.0e-09 65.1 93 40.9
MSTRG.2967 Avicennia marina HOM05D005170 ORTHO05D006985 6.6e-09 64.7 114 36.0
Lsat_1_v5_gn_3_95261 Lactuca sativa HOM05D005170 ORTHO05D006985 1.1e-08 63.9 97 40.2
Rhsim10G0060500 Rhododendron simsii HOM05D005170 ORTHO05D006985 1.5e-08 63.5 103 42.7
Eucgr.I02082 Eucalyptus grandis HOM05D005170 ORTHO05D006985 2.5e-08 62.8 102 45.1
DCAR_007542 Daucus carota HOM05D005170 ORTHO05D006985 9.5e-08 60.8 92 40.2
Aqoxy3G03767 Aquilegia oxysepala HOM05D005170 ORTHO05D006985 2.1e-07 59.7 95 44.2
unitig_899.g15113 Utricularia gibba HOM05D005170 ORTHO05D006985 2.1e-07 59.7 91 38.5
PSO782G1791 Papaver somniferum HOM05D005170 ORTHO05D006985 4.7e-07 58.5 101 36.6
CDE02G1515 Ceratophyllum demersum HOM05D005170 ORTHO05D006985 1.0e-06 57.4 125 32.8
Migut.H00575 Erythranthe guttata HOM05D005170 ORTHO05D006985 5.2e-06 55.1 111 35.1
PSO063G4379 Papaver somniferum HOM05D005170 ORTHO05D006985 5.2e-06 55.1 101 37.6
Aa31LG9G16850 Aethionema arabicum HOM05D005170 ORTHO05D006985 6.8e-06 54.7 83 34.9
ECA246G1099 Erigeron canadensis HOM05D005170 ORTHO05D006985 6.8e-06 54.7 78 43.6
Zm00001eb380550 Zea mays HOM05D005170 ORTHO05D006985 6.8e-06 54.7 110 32.7


User provided reference genes

Program Settings