Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.ASR258 Arachis hypogaea HOM05D008037 ORTHO05D004271 7.7e-79 297.0 139 100.0
arahy.Tifrunner.gnm1.ann1.20TFSQ Arachis hypogaea HOM05D008037 ORTHO05D004271 4.8e-73 277.7 143 93.7
arahy.Tifrunner.gnm1.ann1.P2FSG5 Arachis hypogaea HOM05D008037 ORTHO05D004271 4.8e-73 277.7 143 93.7
arahy.Tifrunner.gnm1.ann1.LBLK2X Arachis hypogaea HOM05D008037 ORTHO05D004271 2.0e-55 219.2 143 77.6
Medtr4g006040 Medicago truncatula HOM05D008037 ORTHO05D009823 6.1e-52 207.6 119 85.7
MBI08_g48225_MAGBIO Magnolia biondii HOM05D008037 ORTHO05D004271 5.7e-50 201.1 116 86.2
arahy.Tifrunner.gnm1.ann1.WFJR7S Arachis hypogaea HOM05D008037 ORTHO05D004271 1.4e-43 179.9 139 68.3
SHI36397 Sapria himalayana HOM05D008037 ORTHO05D004271 1.2e-36 156.8 142 64.1
arahy.Tifrunner.gnm1.ann1.KJ09M7 Arachis hypogaea HOM05D008037 ORTHO05D004271 4.7e-36 154.8 129 63.6
Nitab4.5_0001727g0130 Nicotiana tabacum HOM05D008037 ORTHO05D004271 8.1e-36 154.1 94 81.9
EL10As10g23963 Beta vulgaris HOM05D008037 ORTHO05D004271 2.0e-34 149.4 91 83.5
Hund25912 Selenicereus undatus HOM05D008037 ORTHO05D004271 2.6e-34 149.1 112 69.6
Hund27633 Selenicereus undatus HOM05D008037 ORTHO05D004271 2.6e-34 149.1 112 69.6
Hund27757 Selenicereus undatus HOM05D008037 ORTHO05D004271 2.6e-34 149.1 112 69.6
Hund27833 Selenicereus undatus HOM05D008037 ORTHO05D004271 2.6e-34 149.1 112 69.6
Hund28332 Selenicereus undatus HOM05D008037 ORTHO05D004271 2.6e-34 149.1 112 69.6
Hund28440 Selenicereus undatus HOM05D008037 ORTHO05D004271 2.6e-34 149.1 112 69.6
Hund28538 Selenicereus undatus HOM05D008037 ORTHO05D004271 2.6e-34 149.1 112 69.6
Hund28614 Selenicereus undatus HOM05D008037 ORTHO05D004271 2.6e-34 149.1 112 69.6
Hund28956 Selenicereus undatus HOM05D008037 ORTHO05D004271 2.6e-34 149.1 112 69.6
Hund28981 Selenicereus undatus HOM05D008037 ORTHO05D004271 2.6e-34 149.1 112 69.6
Hund29028 Selenicereus undatus HOM05D008037 ORTHO05D004271 2.6e-34 149.1 112 69.6
Hund29091 Selenicereus undatus HOM05D008037 ORTHO05D004271 2.6e-34 149.1 112 69.6
Hund29181 Selenicereus undatus HOM05D008037 ORTHO05D004271 2.6e-34 149.1 112 69.6
Hund29249 Selenicereus undatus HOM05D008037 ORTHO05D004271 2.6e-34 149.1 112 69.6
Hund29256 Selenicereus undatus HOM05D008037 ORTHO05D004271 2.6e-34 149.1 112 69.6
Hund29263 Selenicereus undatus HOM05D008037 ORTHO05D004271 2.6e-34 149.1 112 69.6
Hund29290 Selenicereus undatus HOM05D008037 ORTHO05D004271 2.6e-34 149.1 112 69.6
Hund29318 Selenicereus undatus HOM05D008037 ORTHO05D004271 2.6e-34 149.1 112 69.6
Hund29436 Selenicereus undatus HOM05D008037 ORTHO05D004271 2.6e-34 149.1 112 69.6
Hund29853 Selenicereus undatus HOM05D008037 ORTHO05D004271 2.6e-34 149.1 112 69.6
Hund30002 Selenicereus undatus HOM05D008037 ORTHO05D004271 2.6e-34 149.1 112 69.6
Hund30263 Selenicereus undatus HOM05D008037 ORTHO05D004271 2.6e-34 149.1 112 69.6
Hund30448 Selenicereus undatus HOM05D008037 ORTHO05D004271 2.6e-34 149.1 112 69.6
Hund30632 Selenicereus undatus HOM05D008037 ORTHO05D004271 2.6e-34 149.1 112 69.6
Hund30993 Selenicereus undatus HOM05D008037 ORTHO05D004271 2.6e-34 149.1 112 69.6
Nitab4.5_0006502g0070 Nicotiana tabacum HOM05D008037 ORTHO05D004271 1.1e-32 143.7 94 77.7
Sopen02g009090 Solanum pennellii HOM05D008037 ORTHO05D004271 9.2e-32 140.6 100 71.0
FAN22G1916 Fragaria x ananassa HOM05D008037 ORTHO05D004271 6.0e-31 137.9 136 58.1
arahy.Tifrunner.gnm1.ann1.JURL6Q Arachis hypogaea HOM05D001966 ORTHO05D007227 4.3e-29 131.7 117 59.8
FAN26G0971 Fragaria x ananassa HOM05D008037 ORTHO05D004271 2.0e-26 122.9 145 55.2
RcHm_v2.0_Chr7g0221131 Rosa chinensis HOM05D008016 ORTHO05D004271 4.4e-26 121.7 126 54.8
Solyc00g500344.1 Solanum lycopersicum HOM05D008037 ORTHO05D004271 2.2e-25 119.4 68 86.8
BcaB02g11353 Brassica carinata HOM05D007952 ORTHO05D009823 2.9e-25 119.0 135 54.1
Nitab4.5_0012234g0010 Nicotiana tabacum HOM05D008037 ORTHO05D004271 3.2e-24 115.5 90 68.9
Nitab4.5_0000066g0170 Nicotiana tabacum HOM05D008037 ORTHO05D004271 7.1e-24 114.4 90 70.0
COL.COLO4_33462 Corchorus olitorius HOM05D008016 ORTHO05D004271 4.6e-23 111.7 135 49.6
Zm00001eb441600 Zea mays HOM05D008037 ORTHO05D004271 8.6e-22 107.5 105 57.1
Sed0000516 Sechium edule HOM05D008037 ORTHO05D004271 1.5e-21 106.7 61 86.9
Nitab4.5_0008665g0060 Nicotiana tabacum HOM05D008037 ORTHO05D004271 6.8e-19 97.8 98 57.1
Sopen10g016570 Solanum pennellii HOM05D008037 ORTHO05D004271 3.8e-17 92.0 70 68.6
CAN.G593.3 Capsicum annuum HOM05D001966 ORTHO05D004271 1.1e-16 90.5 48 89.6
Nitab4.5_0001170g0070 Nicotiana tabacum HOM05D008037 ORTHO05D004271 1.4e-16 90.1 58 77.6
arahy.Tifrunner.gnm1.ann1.KSIE27 Arachis hypogaea HOM05D008037 ORTHO05D004271 3.2e-16 89.0 61 72.1
BcaNung07085 Brassica carinata HOM05D001966 ORTHO05D010449 7.1e-16 87.8 44 88.6
Nitab4.5_0001986g0120 Nicotiana tabacum HOM05D008037 ORTHO05D004271 1.6e-15 86.7 85 57.6
RcHm_v2.0_Chr2g0095251 Rosa chinensis HOM05D008016 ORTHO05D004271 1.6e-15 86.7 45 88.9
BcaC05g27379 Brassica carinata HOM05D008016 ORTHO05D021751 3.0e-14 82.4 107 53.3
Sc05g0004050 Simmondsia chinensis HOM05D001966 ORTHO05D007227 1.5e-13 80.1 44 81.8
Nitab4.5_0004841g0080 Nicotiana tabacum HOM05D008037 ORTHO05D004271 1.9e-13 79.7 51 76.5
EL10Ac6g13942 Beta vulgaris HOM05D008037 ORTHO05D004271 2.5e-13 79.3 49 79.6
ClCG11G009640 Citrullus lanatus HOM05D008354 ORTHO05D010055 2.5e-13 79.3 58 67.2
Oeu040617.1 Olea europaea HOM05D008016 ORTHO05D004271 2.5e-13 79.3 45 82.2
BcaC04g20781 Brassica carinata HOM05D001966 ORTHO05D010449 5.6e-13 78.2 38 89.5
arahy.Tifrunner.gnm1.ann1.54SFA9 Arachis hypogaea HOM05D008037 ORTHO05D004271 1.6e-12 76.6 104 48.1
Solyc11g021160.1 Solanum lycopersicum HOM05D001966 ORTHO05D010055 4.8e-12 75.1 119 38.7
COL.COLO4_03213 Corchorus olitorius HOM05D001966 ORTHO05D010986 6.2e-12 74.7 35 91.4
Gohir.D07G151450 Gossypium hirsutum HOM05D008016 ORTHO05D004271 8.1e-12 74.3 43 76.7
RhsimPtG0005300 Rhododendron simsii HOM05D001966 ORTHO05D007227 6.9e-11 71.2 38 81.6
BolSC45t60899H Brassica oleracea HOM05D008016 ORTHO05D004271 2.6e-10 69.3 52 73.1
Nitab4.5_0004137g0070 Nicotiana tabacum HOM05D008037 ORTHO05D004271 3.4e-10 68.9 60 65.0
Solyc03g058260.1 Solanum lycopersicum HOM05D008037 ORTHO05D004271 5.8e-10 68.2 64 54.7
Nitab4.5_0005831g0120 Nicotiana tabacum HOM05D008354 ORTHO05D010055 1.3e-09 67.0 32 90.6
Peaxi162Scf00080g00520 Petunia axillaris HOM05D008037 ORTHO05D004271 1.3e-09 67.0 79 51.9
AL9U11930 Arabidopsis lyrata HOM05D001966 ORTHO05D007227 1.7e-09 66.6 37 81.1
Gohir.A09G103364 Gossypium hirsutum HOM05D008016 ORTHO05D004271 1.7e-09 66.6 31 96.8
Lj1g0013448 Lotus japonicus HOM05D007952 ORTHO05D009823 1.7e-09 66.6 31 96.8
Lalb_Chr03g0039361 Lupinus albus HOM05D008016 ORTHO05D004271 1.7e-09 66.6 31 96.8
Potri.008G221801 Populus trichocarpa HOM05D008037 ORTHO05D004271 2.2e-09 66.2 31 93.5
MD03G1269900 Malus domestica HOM05D008037 ORTHO05D004271 4.9e-09 65.1 44 72.7
CDE02G0533 Ceratophyllum demersum HOM05D008037 ORTHO05D004271 6.4e-09 64.7 31 93.5
Lsat_1_v5_gn_4_63021 Lactuca sativa HOM05D007952 ORTHO05D009823 6.4e-09 64.7 31 93.5
Solyc04g082990.3 Solanum lycopersicum HOM05D005978 ORTHO05D004271 6.4e-09 64.7 47 66.0
Solyc09g011150.1 Solanum lycopersicum HOM05D008037 ORTHO05D004271 6.4e-09 64.7 31 93.5
Gohir.A09G101825 Gossypium hirsutum HOM05D008016 ORTHO05D004271 8.4e-09 64.3 33 87.9
Gohir.A07G174766 Gossypium hirsutum HOM05D008016 ORTHO05D004271 1.4e-08 63.5 31 90.3
arahy.Tifrunner.gnm1.ann1.XGYT8C Arachis hypogaea HOM05D008037 ORTHO05D004271 1.9e-08 63.2 31 90.3
Lsat_1_v5_gn_2_98441 Lactuca sativa HOM05D008016 ORTHO05D004271 1.9e-08 63.2 31 90.3
Nitab4.5_0001761g0150 Nicotiana tabacum HOM05D008037 ORTHO05D004271 2.4e-08 62.8 31 87.1
Phvul.009G203800 Phaseolus vulgaris HOM05D008037 ORTHO05D004271 3.2e-08 62.4 30 96.7
arahy.Tifrunner.gnm1.ann1.M1FG7L Arachis hypogaea HOM05D008354 ORTHO05D010055 7.1e-08 61.2 29 89.7
Peaxi162Scf00210g00153 Petunia axillaris HOM05D008037 ORTHO05D004271 7.1e-08 61.2 31 87.1
Lj4g0016112 Lotus japonicus HOM05D007952 ORTHO05D009823 9.3e-08 60.8 31 90.3
arahy.Tifrunner.gnm1.ann1.61DFKT Arachis hypogaea HOM05D008037 ORTHO05D004271 2.1e-07 59.7 27 96.3
CAN.G134.6 Capsicum annuum HOM05D008037 ORTHO05D004271 3.5e-07 58.9 30 86.7
Glyma.15G274900 Glycine max HOM05D008016 ORTHO05D004271 3.5e-07 58.9 34 79.4
Nitab4.5_0027992g0040 Nicotiana tabacum HOM05D008037 ORTHO05D004271 4.6e-07 58.5 30 86.7
EL10As18g24159 Beta vulgaris HOM05D008037 ORTHO05D004271 1.0e-06 57.4 58 58.6
Hund28446 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.0e-06 57.4 31 83.9
Hund28585 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.0e-06 57.4 31 83.9
Hund28944 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.0e-06 57.4 31 83.9
Hund28949 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.0e-06 57.4 31 83.9
Hund28959 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.0e-06 57.4 31 83.9
Hund29107 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.0e-06 57.4 31 83.9
Hund29184 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.0e-06 57.4 31 83.9
Hund29242 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.0e-06 57.4 31 83.9
Hund29271 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.0e-06 57.4 31 83.9
Hund29275 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.0e-06 57.4 31 83.9
Hund29279 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.0e-06 57.4 31 83.9
Hund29283 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.0e-06 57.4 31 83.9
Hund29451 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.0e-06 57.4 31 83.9
Hund29497 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.0e-06 57.4 31 83.9
Hund29785 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.0e-06 57.4 31 83.9
Hund29912 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.0e-06 57.4 31 83.9
Hund30004 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.0e-06 57.4 31 83.9
Hund30064 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.0e-06 57.4 31 83.9
Hund30203 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.0e-06 57.4 31 83.9
Gohir.A13G086605 Gossypium hirsutum HOM05D008016 ORTHO05D004271 1.7e-06 56.6 33 81.8
Migut.A01208 Erythranthe guttata HOM05D008016 ORTHO05D004271 2.3e-06 56.2 42 66.7
Solyc03g150126.1 Solanum lycopersicum HOM05D008037 ORTHO05D004271 3.0e-06 55.8 99 41.4
vmacro22395 Vaccinium macrocarpon HOM05D008016 ORTHO05D004271 5.1e-06 55.1 28 85.7
EL10Ac5g11360 Beta vulgaris HOM05D008037 ORTHO05D004271 8.7e-06 54.3 30 80.0
Manes.07G046200 Manihot esculenta HOM05D008037 ORTHO05D004271 8.7e-06 54.3 37 67.6
Solyc05g047670.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 8.7e-06 54.3 23 100.0


User provided reference genes

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