Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.ASDQ9T Arachis hypogaea HOM05D007555 ORTHO05D009521 6.3e-102 374.4 170 100.0
arahy.Tifrunner.gnm1.ann1.UIJ5I4 Arachis hypogaea HOM05D007555 ORTHO05D009521 2.5e-66 256.1 204 64.2
Glyma.13G134800 Glycine max HOM05D007555 ORTHO05D009521 4.1e-53 212.2 165 61.8
Lj5g0027152 Lotus japonicus HOM05D007555 ORTHO05D009521 9.2e-53 211.1 166 62.0
Cpa.g.sc114.21 Carica papaya HOM05D007555 ORTHO05D009521 3.5e-52 209.1 162 59.3
Medtr1g067330 Medicago truncatula HOM05D007555 ORTHO05D009521 1.0e-51 207.6 167 59.3
Potri.006G215300 Populus trichocarpa HOM05D007555 ORTHO05D009521 5.1e-51 205.3 165 60.6
Phvul.007G161000 Phaseolus vulgaris HOM05D007555 ORTHO05D009521 1.5e-50 203.8 168 58.9
Migut.L01641 Erythranthe guttata HOM05D007555 ORTHO05D009521 2.5e-50 203.0 167 55.7
Psat6g069400 Pisum sativum HOM05D007555 ORTHO05D009521 3.3e-50 202.6 164 57.9
VMungo0720G3150 Vigna mungo HOM05D007555 ORTHO05D009521 4.3e-50 202.2 168 57.7
Cc06_g03250 Coffea canephora HOM05D007555 ORTHO05D009521 5.6e-50 201.8 175 54.3
Thecc.05G049100 Theobroma cacao HOM05D007555 ORTHO05D009521 2.1e-49 199.9 162 59.3
TPR.G7549 Trifolium pratense HOM05D007555 ORTHO05D009521 2.8e-49 199.5 154 61.0
RcHm_v2.0_Chr3g0468011 Rosa chinensis HOM05D007555 ORTHO05D009521 3.6e-49 199.1 167 53.9
QL07p045973 Quercus lobata HOM05D007555 ORTHO05D009521 1.1e-48 197.6 165 57.6
Ciclev10012844m.g Citrus clementina HOM05D007555 ORTHO05D009521 1.4e-48 197.2 167 58.1
Actinidia05288 Actinidia chinensis HOM05D007555 ORTHO05D009521 1.8e-48 196.8 164 57.3
Sabra06G0166200 Salix brachista HOM05D007555 ORTHO05D009521 2.4e-48 196.4 159 59.7
Gorai.002G252400 Gossypium raimondii HOM05D007555 ORTHO05D009521 3.1e-48 196.1 157 58.6
Atru.chr8.2503 Acer truncatum HOM05D007555 ORTHO05D009521 4.0e-48 195.7 169 55.6
Gohir.D01G207300 Gossypium hirsutum HOM05D007555 ORTHO05D009521 5.2e-48 195.3 157 58.6
Manes.08G000300 Manihot esculenta HOM05D007555 ORTHO05D009521 5.2e-48 195.3 155 58.1
Eucgr.A01211 Eucalyptus grandis HOM05D007555 ORTHO05D009521 6.8e-48 194.9 165 56.4
FAN09G3476 Fragaria x ananassa HOM05D007555 ORTHO05D009521 6.8e-48 194.9 165 53.9
MSTRG.26743 Avicennia marina HOM05D007555 ORTHO05D009521 8.9e-48 194.5 164 54.3
THA.LOC104816299 Tarenaya hassleriana HOM05D007555 ORTHO05D009521 8.9e-48 194.5 167 55.1
Gohir.A01G218500 Gossypium hirsutum HOM05D007555 ORTHO05D009521 1.2e-47 194.1 162 56.8
MD12G1131600 Malus domestica HOM05D007555 ORTHO05D009521 1.2e-47 194.1 167 53.9
FvH4_6g14780 Fragaria vesca HOM05D007555 ORTHO05D009521 2.0e-47 193.4 165 52.7
FAN05G0792 Fragaria x ananassa HOM05D007555 ORTHO05D009521 2.0e-47 193.4 165 52.7
FAN14G0454 Fragaria x ananassa HOM05D007555 ORTHO05D009521 2.0e-47 193.4 165 52.7
Hma1.2p1_0111F.1_g053420 Hydrangea macrophylla HOM05D007555 ORTHO05D009521 3.4e-47 192.6 167 53.9
Nn2g12825 Nelumbo nucifera HOM05D000419 ORTHO05D000692 4.4e-47 192.2 162 56.2
ATR0693G428 Amborella trichopoda HOM05D007555 ORTHO05D009521 7.6e-47 191.4 159 57.2
Haze_20696 Corylus avellana HOM05D007555 ORTHO05D009521 9.9e-47 191.0 165 54.5
CAN.G350.37 Capsicum annuum HOM05D007555 ORTHO05D009521 1.3e-46 190.7 165 54.5
A10p33000 Brassica napus HOM05D007555 ORTHO05D009521 2.9e-46 189.5 167 53.3
BraA10t45337Z Brassica rapa HOM05D007555 ORTHO05D009521 2.9e-46 189.5 167 53.3
Prupe.6G246000 Prunus persica HOM05D007555 ORTHO05D009521 3.8e-46 189.1 167 51.5
SGA_v2.0_scaffold94G28647 Striga asiatica HOM05D007555 ORTHO05D009521 4.9e-46 188.7 162 52.5
Nitab4.5_0000643g0170 Nicotiana tabacum HOM05D007555 ORTHO05D009521 6.4e-46 188.3 165 52.1
Solyc09g006000.3 Solanum lycopersicum HOM05D007555 ORTHO05D009521 6.4e-46 188.3 165 52.7
Aqoxy2G01932 Aquilegia oxysepala HOM05D007555 ORTHO05D009521 8.4e-46 188.0 164 53.7
Dinv37229 Davidia involucrata HOM05D007555 ORTHO05D009521 1.4e-45 187.2 164 54.3
CARHR210660 Cardamine hirsuta HOM05D007555 ORTHO05D009521 2.4e-45 186.4 167 53.3
HanXRQChr07g0204191 Helianthus annuus HOM05D007555 ORTHO05D009521 3.2e-45 186.0 162 54.3
BolC9t60132H Brassica oleracea HOM05D007555 ORTHO05D009521 4.2e-45 185.7 167 52.1
DCAR_017749 Daucus carota HOM05D007555 ORTHO05D009521 4.2e-45 185.7 166 53.6
AL6G11950 Arabidopsis lyrata HOM05D007555 ORTHO05D009521 7.1e-45 184.9 167 53.3
BcaC06g32006 Brassica carinata HOM05D007555 ORTHO05D009521 7.1e-45 184.9 167 52.1
CsaV3_4G024530 Cucumis sativus L. HOM05D007555 ORTHO05D009521 7.1e-45 184.9 164 54.3
Nitab4.5_0006252g0040 Nicotiana tabacum HOM05D007555 ORTHO05D009521 7.1e-45 184.9 165 52.1
BcaNung03281 Brassica carinata HOM05D007555 ORTHO05D009521 9.2e-45 184.5 167 51.5
C09p73970 Brassica napus HOM05D007555 ORTHO05D009521 9.2e-45 184.5 167 51.5
GSVIVG01025579001 Vitis vinifera HOM05D007555 ORTHO05D009521 9.2e-45 184.5 164 51.8
PSO384G0825 Papaver somniferum HOM05D007555 ORTHO05D009521 1.2e-44 184.1 160 53.8
TWI53G2115 Tripterygium wilfordii HOM05D007555 ORTHO05D009521 1.2e-44 184.1 164 53.7
Aa31LG1G22170 Aethionema arabicum HOM05D007555 ORTHO05D009521 1.6e-44 183.7 167 52.1
AT5G02710 Arabidopsis thaliana HOM05D007555 ORTHO05D009521 1.6e-44 183.7 167 52.1
AUR62030924 Chenopodium quinoa HOM05D007555 ORTHO05D009521 1.6e-44 183.7 163 52.1
PSO339G2355 Papaver somniferum HOM05D007555 ORTHO05D009521 1.6e-44 183.7 162 53.7
ClCG04G008630 Citrullus lanatus HOM05D007555 ORTHO05D009521 2.7e-44 183.0 166 54.2
PGR004G0254 Punica granatum HOM05D007555 ORTHO05D009521 2.7e-44 183.0 165 53.3
CDE05G2937 Ceratophyllum demersum HOM05D007555 ORTHO05D009521 4.6e-44 182.2 164 53.7
Carub.0006s0147 Capsella rubella HOM05D007555 ORTHO05D009521 6.0e-44 181.8 167 53.3
Ah.01g007300 Amaranthus hybridus HOM05D007555 ORTHO05D009521 1.0e-43 181.0 163 49.7
MELO3C003085.2 Cucumis melo HOM05D007555 ORTHO05D009521 1.0e-43 181.0 167 53.3
Thhalv10014815m.g Eutrema salsugineum HOM05D007555 ORTHO05D009521 1.0e-43 181.0 167 50.9
Hund06478 Selenicereus undatus HOM05D007555 ORTHO05D009521 1.0e-43 181.0 164 51.8
vmacro08680 Vaccinium macrocarpon HOM05D007555 ORTHO05D009521 3.0e-43 179.5 153 52.9
Medtr0016s0020 Medicago truncatula HOM05D007555 ORTHO05D009521 3.9e-43 179.1 112 71.4
Sed0003448 Sechium edule HOM05D007555 ORTHO05D009521 1.1e-42 177.6 164 54.3
Lsat_1_v5_gn_2_111420 Lactuca sativa HOM05D007555 ORTHO05D009521 1.9e-42 176.8 103 71.8
ECA238G3221 Erigeron canadensis HOM05D000025 ORTHO05D000040 2.5e-42 176.4 164 51.8
EL10Ac9g22121 Beta vulgaris HOM05D007555 ORTHO05D009521 2.8e-41 172.9 161 48.4
Cfa017464 Carpinus fangiana HOM05D007555 ORTHO05D009521 1.1e-40 171.0 109 66.1
CiPaw.09G185700 Carya illinoinensis HOM05D007555 ORTHO05D009521 4.0e-40 169.1 108 65.7
Lj2P231T24 Lonicera japonica HOM05D007555 ORTHO05D009521 3.4e-39 166.0 96 71.9
Sp6g39860 Schrenkiella parvula HOM05D007555 ORTHO05D009521 4.4e-39 165.6 103 68.0
SEGI_01945 Sequoiadendron giganteum HOM05D007555 ORTHO05D009521 2.2e-38 163.3 156 49.4
unitig_0.g697 Utricularia gibba HOM05D000139 ORTHO05D009521 4.9e-38 162.2 104 68.3
Sc08g0004110 Simmondsia chinensis HOM05D007555 ORTHO05D009521 1.4e-37 160.6 100 65.0
Zm00001eb017700 Zea mays HOM05D007555 ORTHO05D009521 4.3e-34 149.1 157 43.9
PGSC0003DMG400023920 Solanum tuberosum HOM05D007555 ORTHO05D009521 1.1e-32 144.4 166 45.2
BcaC09g50387 Brassica carinata HOM05D007555 ORTHO05D009521 3.1e-32 142.9 168 42.9
C02p41790 Brassica napus HOM05D007555 ORTHO05D009521 6.9e-32 141.7 102 58.8
Os03g0363400 Oryza sativa ssp. japonica HOM05D007555 ORTHO05D009521 6.9e-32 141.7 156 43.6
Pp3c1_22520 Physcomitrium patens HOM05D007555 ORTHO05D009521 6.9e-32 141.7 161 39.8
Lalb_Chr02g0153411 Lupinus albus HOM05D007555 ORTHO05D009521 1.2e-31 141.0 114 58.8
BcaC03g16355 Brassica carinata HOM05D007555 ORTHO05D009521 1.7e-30 137.1 102 57.8
BolC1t02552H Brassica oleracea HOM05D007555 ORTHO05D009521 2.4e-29 133.3 158 43.0
Peaxi162Scf00597g00516 Petunia axillaris HOM05D007555 ORTHO05D009521 1.0e-27 127.9 115 52.2
C01p26070 Brassica napus HOM05D007555 ORTHO05D009521 3.0e-27 126.3 158 41.8
TAR636G0687 Trochodendron aralioides HOM05D007555 ORTHO05D009521 3.7e-25 119.4 72 68.1
FAN02G2228 Fragaria x ananassa HOM05D007555 ORTHO05D009521 4.0e-24 115.9 120 45.8
Lalb_Chr02g0153401 Lupinus albus HOM05D007555 ORTHO05D009521 3.5e-12 76.3 47 72.3
SEGI_05937 Sequoiadendron giganteum HOM05D007555 ORTHO05D009521 3.5e-12 76.3 94 43.6
COL.COLO4_10316 Corchorus olitorius HOM05D007555 ORTHO05D009521 3.9e-11 72.8 50 66.0
CSS0046800 Camellia sinensis var. sinensis HOM05D007555 ORTHO05D009521 5.1e-11 72.4 45 71.1
Lj2A103T67 Lonicera japonica HOM05D007555 ORTHO05D009521 2.5e-10 70.1 47 63.8


User provided reference genes

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