Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.ARK2IX Arachis hypogaea HOM05D007528 ORTHO05D008503 8.7e-142 506.9 246 100.0
arahy.Tifrunner.gnm1.ann1.ZMQ31P Arachis hypogaea HOM05D007528 ORTHO05D008503 8.1e-124 447.2 246 89.0
Glyma.19G123400 Glycine max HOM05D007528 ORTHO05D008503 1.0e-102 377.1 250 79.2
Lj1g0006388 Lotus japonicus HOM05D007528 ORTHO05D008503 8.8e-102 374.0 254 75.6
Lalb_Chr22g0358311 Lupinus albus HOM05D007528 ORTHO05D008503 1.3e-100 370.2 258 75.2
Phvul.001G109000 Phaseolus vulgaris HOM05D007528 ORTHO05D008503 1.3e-97 360.1 249 76.7
Ca_08340_v3 Cicer arietinum L. HOM05D007528 ORTHO05D008503 5.0e-97 358.2 253 73.5
Medtr7g088210 Medicago truncatula HOM05D007528 ORTHO05D008503 4.2e-96 355.1 256 70.7
Psat3g082960 Pisum sativum HOM05D007528 ORTHO05D008503 2.1e-95 352.8 257 70.0
TPR.G23704 Trifolium pratense HOM05D007528 ORTHO05D008503 5.9e-90 334.7 264 68.2
QL11p009983 Quercus lobata HOM05D007528 ORTHO05D008503 8.0e-79 297.7 237 61.6
CSS0027135 Camellia sinensis var. sinensis HOM05D007528 ORTHO05D008503 2.2e-76 289.7 221 63.8
Dinv14550 Davidia involucrata HOM05D007528 ORTHO05D008503 7.0e-75 284.6 225 61.3
Thecc.05G128400 Theobroma cacao HOM05D007528 ORTHO05D008503 9.1e-75 284.3 240 60.4
Gorai.002G231000 Gossypium raimondii HOM05D007528 ORTHO05D008503 1.2e-74 283.9 258 57.8
TAR623G0014 Trochodendron aralioides HOM05D007528 ORTHO05D008503 1.6e-74 283.5 194 68.6
Gohir.D01G187600 Gossypium hirsutum HOM05D007528 ORTHO05D008503 2.0e-74 283.1 258 57.4
COL.COLO4_08087 Corchorus olitorius HOM05D007528 ORTHO05D008503 3.5e-74 282.3 204 66.2
Gohir.A01G197400 Gossypium hirsutum HOM05D007528 ORTHO05D008503 7.7e-74 281.2 258 57.8
Manes.09G073900 Manihot esculenta HOM05D007528 ORTHO05D008503 2.2e-73 279.6 243 58.0
Eucgr.A02169 Eucalyptus grandis HOM05D007528 ORTHO05D008503 1.1e-72 277.3 247 58.3
GSVIVG01025860001 Vitis vinifera HOM05D007528 ORTHO05D008503 1.1e-72 277.3 195 68.2
RcHm_v2.0_Chr3g0495771 Rosa chinensis HOM05D007528 ORTHO05D008503 7.2e-72 274.6 206 66.0
FvH4_1g29750 Fragaria vesca HOM05D007528 ORTHO05D008503 1.2e-71 273.9 241 58.1
FAN28G2175 Fragaria x ananassa HOM05D007528 ORTHO05D008503 1.2e-71 273.9 199 67.8
Ciclev10012580m.g Citrus clementina HOM05D007528 ORTHO05D008503 2.1e-71 273.1 231 60.6
FAN26G0883 Fragaria x ananassa HOM05D007528 ORTHO05D008503 2.7e-71 272.7 199 67.3
MBI13_g02396_MAGBIO Magnolia biondii HOM05D007528 ORTHO05D008503 2.7e-71 272.7 229 60.7
Duzib093G0275 Durio zibethinus HOM05D007528 ORTHO05D008503 4.7e-71 271.9 250 57.2
Cpa.g.sc33.188 Carica papaya HOM05D007528 ORTHO05D008503 8.0e-71 271.2 233 59.2
vmacro12911 Vaccinium macrocarpon HOM05D007528 ORTHO05D008503 8.0e-71 271.2 262 54.2
PSO729G0248 Papaver somniferum HOM05D007528 ORTHO05D008503 1.4e-70 270.4 184 69.0
Potri.006G025200 Populus trichocarpa HOM05D007528 ORTHO05D008503 1.2e-69 267.3 197 65.5
Sabra06G0018500 Salix brachista HOM05D007528 ORTHO05D008503 1.2e-69 267.3 245 56.3
Haze_09241 Corylus avellana HOM05D007528 ORTHO05D006305 1.5e-69 266.9 201 63.2
TWI63G0885 Tripterygium wilfordii HOM05D007528 ORTHO05D008503 2.0e-69 266.5 198 62.1
MSTRG.19743 Avicennia marina HOM05D007528 ORTHO05D008503 2.6e-69 266.2 250 54.4
Atru.chr8.936 Acer truncatum HOM05D007528 ORTHO05D008503 5.7e-69 265.0 205 64.4
Lj2A414T28 Lonicera japonica HOM05D007528 ORTHO05D008503 9.8e-69 264.2 247 54.7
ClCG10G016790 Citrullus lanatus HOM05D007528 ORTHO05D008503 1.7e-68 263.5 246 56.9
Nn7g37298 Nelumbo nucifera HOM05D007528 ORTHO05D008503 2.8e-68 262.7 190 65.3
Migut.J01598 Erythranthe guttata HOM05D007528 ORTHO05D008503 3.7e-68 262.3 241 54.8
PGR042G1749 Punica granatum HOM05D007528 ORTHO05D008503 1.1e-67 260.8 238 59.2
Aqoxy2G00067 Aquilegia oxysepala HOM05D007528 ORTHO05D008503 1.4e-67 260.4 212 59.0
Oeu032951.1 Olea europaea HOM05D007528 ORTHO05D008503 1.8e-67 260.0 209 60.8
DCAR_013508 Daucus carota HOM05D007528 ORTHO05D008503 3.1e-67 259.2 251 55.4
MD12G1013500 Malus domestica HOM05D007528 ORTHO05D008503 1.2e-66 257.3 200 66.0
CANSAT21G0864 Cannabis sativa HOM05D007528 ORTHO05D008503 1.6e-66 256.9 184 67.9
SalBow6G5282 Salvia bowleyana HOM05D007528 ORTHO05D008503 2.7e-66 256.1 182 67.6
THA.LOC104803254 Tarenaya hassleriana HOM05D007528 ORTHO05D008503 5.9e-66 255.0 199 64.3
AL4G39090 Arabidopsis lyrata HOM05D007528 ORTHO05D008503 7.7e-66 254.6 192 65.1
CsaV3_3G039560 Cucumis sativus L. HOM05D007528 ORTHO05D008503 7.7e-66 254.6 198 63.1
SalBow6G5858 Salvia bowleyana HOM05D007528 ORTHO05D008503 7.7e-66 254.6 182 67.0
Cc06_g21080 Coffea canephora HOM05D007528 ORTHO05D008503 2.3e-65 253.1 226 56.6
HanXRQChr04g0125621 Helianthus annuus HOM05D007528 ORTHO05D008503 2.9e-65 252.7 219 56.6
Sed0015046 Sechium edule HOM05D007528 ORTHO05D008503 3.8e-65 252.3 232 58.2
Carub.0004s2343 Capsella rubella HOM05D007528 ORTHO05D008503 6.6e-65 251.5 184 66.8
ATR0307G122 Amborella trichopoda HOM05D007528 ORTHO05D008503 1.5e-64 250.4 200 57.5
C04p68770 Brassica napus HOM05D007528 ORTHO05D008503 1.5e-64 250.4 248 55.6
Thhalv10017145m.g Eutrema salsugineum HOM05D007528 ORTHO05D008503 1.5e-64 250.4 194 63.4
Lsat_1_v5_gn_8_83941 Lactuca sativa HOM05D007528 ORTHO05D008503 1.9e-64 250.0 170 65.9
AT2G41120 Arabidopsis thaliana HOM05D007528 ORTHO05D008503 5.6e-64 248.4 192 63.0
BolC4t28382H Brassica oleracea HOM05D007528 ORTHO05D008503 9.5e-64 247.7 248 54.8
Nitab4.5_0000382g0060 Nicotiana tabacum HOM05D007528 ORTHO05D008503 9.5e-64 247.7 190 62.6
BraA04t18594Z Brassica rapa HOM05D007528 ORTHO05D008503 1.6e-63 246.9 253 54.9
Peaxi162Scf00183g00712 Petunia axillaris HOM05D007528 ORTHO05D008503 1.6e-63 246.9 236 50.8
Sp4g23430 Schrenkiella parvula HOM05D007528 ORTHO05D008503 1.6e-63 246.9 246 54.9
PGSC0003DMG400019757 Solanum tuberosum HOM05D007528 ORTHO05D008503 3.6e-63 245.7 252 52.0
A04p31360 Brassica napus HOM05D007528 ORTHO05D008503 4.7e-63 245.4 181 64.6
CDE04G0261 Ceratophyllum demersum HOM05D007528 ORTHO05D008503 6.1e-63 245.0 207 54.1
ECA236G1579 Erigeron canadensis HOM05D007528 ORTHO05D008503 4.0e-62 242.3 186 60.8
Aa31LG3G960 Aethionema arabicum HOM05D007528 ORTHO05D008503 5.7e-61 238.4 192 60.9
Solyc03g044630.2 Solanum lycopersicum HOM05D007528 ORTHO05D008503 1.7e-60 236.9 250 50.4
EL10Ac5g11614 Beta vulgaris HOM05D007528 ORTHO05D008503 1.8e-59 233.4 193 59.6
Prupe.7G017900 Prunus persica HOM05D007528 ORTHO05D008503 4.1e-59 232.3 194 62.4
BcaNung05626 Brassica carinata HOM05D007528 ORTHO05D008503 7.8e-58 228.0 258 50.8
SEGI_20851 Sequoiadendron giganteum HOM05D007528 ORTHO05D008503 1.9e-56 223.4 222 50.9
Os11g0130200 Oryza sativa ssp. japonica HOM05D007528 ORTHO05D008503 1.2e-55 220.7 198 55.6
Zm00001eb195960 Zea mays HOM05D007528 ORTHO05D008503 4.0e-54 215.7 253 49.0
CARHR136210 Cardamine hirsuta HOM05D007528 ORTHO05D008503 7.5e-53 211.5 197 56.3
Mapoly0168s0009 Marchantia polymorpha HOM05D007528 ORTHO05D008503 7.0e-51 204.9 204 50.5
CiPaw.13G169300 Carya illinoinensis HOM05D007528 ORTHO05D008503 1.2e-50 204.1 129 70.5
Rhsim10G0151800 Rhododendron simsii HOM05D007528 ORTHO05D008503 3.5e-50 202.6 353 35.7
AagrBONN_evm.TU.Sc2ySwM_344.4238 Anthoceros agrestis HOM05D007528 ORTHO05D008503 1.7e-49 200.3 211 48.8
Pp3c21_6860 Physcomitrium patens HOM05D007528 ORTHO05D008503 1.4e-46 190.7 194 50.0
CBR_g37627 Chara braunii HOM05D007528 ORTHO05D008503 5.8e-45 185.3 193 48.7
SMO266G0100 Selaginella moellendorffii HOM05D007528 ORTHO05D008503 2.2e-44 183.3 180 48.9
Glyma.03G119100 Glycine max HOM05D007528 ORTHO05D008503 4.9e-44 182.2 119 79.0
FAN19G0638 Fragaria x ananassa HOM05D007528 ORTHO05D008503 8.6e-41 171.4 128 67.2
unitig_21.g20663 Utricularia gibba HOM05D007528 ORTHO05D008503 1.3e-33 147.5 183 45.9
BcaC02g12850 Brassica carinata HOM05D007528 ORTHO05D008503 6.6e-33 145.2 165 49.7
Glyma.03G119000 Glycine max HOM05D007528 ORTHO05D008503 1.9e-32 143.7 135 63.7
CAN.G1129.33 Capsicum annuum HOM05D007528 ORTHO05D008503 9.6e-32 141.4 119 58.8
VMungo1383G2363 Vigna mungo HOM05D007528 ORTHO05D008503 9.6e-32 141.4 132 62.9
Sopen03g008910 Solanum pennellii HOM05D007528 ORTHO05D008503 6.9e-30 135.2 118 55.9
SEGI_18622 Sequoiadendron giganteum HOM05D007528 ORTHO05D008503 5.4e-19 99.0 104 49.0
FAN23G1305 Fragaria x ananassa HOM05D007528 ORTHO05D029410 3.6e-15 86.3 80 56.2
Cfa011867 Carpinus fangiana HOM05D007528 ORTHO05D008503 3.4e-13 79.7 59 59.3
Hma1.2p1_1327F.1_g275910 Hydrangea macrophylla HOM05D007528 ORTHO05D008503 1.3e-12 77.8 66 56.1


User provided reference genes

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