Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.AMUJ6F Arachis hypogaea HOM05D000533 ORTHO05D001069 4.1e-71 271.2 127 100.0
Ca_17160_v3 Cicer arietinum L. HOM05D000533 ORTHO05D001069 3.0e-53 211.8 157 69.4
Ca_26706_v3 Cicer arietinum L. HOM05D000533 ORTHO05D001069 3.0e-53 211.8 157 69.4
SGA_v2.0_scaffold400G50831 Striga asiatica HOM05D000533 ORTHO05D001069 5.6e-52 207.6 157 68.2
Cfa023037 Carpinus fangiana HOM05D000533 ORTHO05D001069 4.7e-51 204.5 157 66.9
Peaxi162Scf00864g00009 Petunia axillaris HOM05D000533 ORTHO05D001069 3.6e-43 178.3 123 73.2
Nitab4.5_0002418g0130 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.2e-38 163.3 150 58.7
Thhalv10028891m.g Eutrema salsugineum HOM05D000533 ORTHO05D001069 6.0e-38 161.0 116 71.6
Nitab4.5_0007336g0020 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.3e-35 153.3 159 54.1
CDE02G3581 Ceratophyllum demersum HOM05D000533 ORTHO05D001069 2.1e-35 152.5 161 53.4
Solyc12g036600.2 Solanum lycopersicum HOM05D000533 ORTHO05D001069 4.0e-34 148.3 107 71.0
A04p09590 Brassica napus HOM05D000533 ORTHO05D001069 8.4e-32 140.6 64 98.4
C01p34660 Brassica napus HOM05D000533 ORTHO05D001069 8.4e-32 140.6 64 98.4
BolSC28t60325H Brassica oleracea HOM05D000533 ORTHO05D001069 8.4e-32 140.6 64 98.4
BolSC28t60427H Brassica oleracea HOM05D000533 ORTHO05D001069 8.4e-32 140.6 64 98.4
BraSC159t45715Z Brassica rapa HOM05D000533 ORTHO05D001069 8.4e-32 140.6 64 98.4
AUR62043913 Chenopodium quinoa HOM05D000533 ORTHO05D001069 1.4e-31 139.8 94 77.7
Peaxi162Scf00197g00027 Petunia axillaris HOM05D000533 ORTHO05D001069 4.6e-30 134.8 115 62.6
SabraMtG0006600 Salix brachista HOM05D000533 ORTHO05D001069 1.0e-29 133.7 62 95.2
BraSC48t46291Z Brassica rapa HOM05D000533 ORTHO05D001069 1.3e-29 133.3 60 98.3
RhsimMtG0002200 Rhododendron simsii HOM05D000533 ORTHO05D001069 3.0e-29 132.1 64 93.8
Nitab4.5_0001153g0040 Nicotiana tabacum HOM05D000533 ORTHO05D001069 5.1e-29 131.3 120 59.2
arahy.Tifrunner.gnm1.ann1.PN90EB Arachis hypogaea HOM05D007533 ORTHO05D009622 3.3e-28 128.6 61 98.4
CsaV3_6G025230 Cucumis sativus L. HOM05D000533 ORTHO05D001069 1.6e-27 126.3 58 94.8
CsaV3_6G025300 Cucumis sativus L. HOM05D000533 ORTHO05D001069 1.6e-27 126.3 58 94.8
CsaV3_UNG208530 Cucumis sativus L. HOM05D000533 ORTHO05D001069 1.6e-27 126.3 58 94.8
Sed0020382 Sechium edule HOM05D000533 ORTHO05D001069 1.6e-27 126.3 58 94.8
BolC1t03435H Brassica oleracea HOM05D000533 ORTHO05D001069 4.8e-27 124.8 60 93.3
Peaxi162Scf00197g00048 Petunia axillaris HOM05D000533 ORTHO05D001069 1.2e-25 120.2 116 55.2
arahy.Tifrunner.gnm1.ann1.P8H99U Arachis hypogaea HOM05D014397 ORTHO05D001069 4.5e-25 118.2 56 96.4
Aa31csc1081G30 Aethionema arabicum HOM05D000533 ORTHO05D001069 2.5e-23 112.5 52 98.1
ATMG00510 Arabidopsis thaliana HOM05D000533 ORTHO05D001069 5.5e-23 111.3 53 96.2
Aqoxy3G01140 Aquilegia oxysepala HOM05D000533 ORTHO05D001069 1.2e-22 110.2 50 98.0
CDE02G4047 Ceratophyllum demersum HOM05D000533 ORTHO05D001069 1.2e-22 110.2 50 98.0
DCAR_032449 Daucus carota HOM05D000533 ORTHO05D001069 1.2e-22 110.2 51 96.1
HanXRQChr08g0236031 Helianthus annuus HOM05D000533 ORTHO05D001069 1.2e-22 110.2 50 98.0
HanXRQChr14g0434371 Helianthus annuus HOM05D000533 ORTHO05D001069 1.2e-22 110.2 50 98.0
HanXRQMTg0579581 Helianthus annuus HOM05D000533 ORTHO05D001069 1.2e-22 110.2 50 98.0
Sp3g25570 Schrenkiella parvula HOM05D000533 ORTHO05D001069 1.2e-22 110.2 51 98.0
Nitab4.5_0008916g0020 Nicotiana tabacum HOM05D000533 ORTHO05D001069 2.1e-22 109.4 163 41.7
Cpa.g.sc263.14 Carica papaya HOM05D000533 ORTHO05D001069 2.7e-22 109.0 51 96.1
Dinv06691 Davidia involucrata HOM05D000533 ORTHO05D001069 6.0e-22 107.8 50 96.0
Lalb_Chr00c24g0407301 Lupinus albus HOM05D000533 ORTHO05D001069 6.0e-22 107.8 49 98.0
Lsat_1_v5_gn_5_16060 Lactuca sativa HOM05D000533 ORTHO05D001069 7.9e-22 107.5 49 98.0
TPR.G22491 Trifolium pratense HOM05D000533 ORTHO05D001069 7.9e-22 107.5 49 98.0
Nitab4.5_0001035g0040 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.3e-21 106.7 63 81.0
SalBow1G6484 Salvia bowleyana HOM05D000533 ORTHO05D001069 1.3e-21 106.7 52 92.3
LjContig00315g0008577 Lotus japonicus HOM05D000533 ORTHO05D001069 1.8e-21 106.3 49 95.9
Aqoxy4G01613 Aquilegia oxysepala HOM05D000533 ORTHO05D001069 2.3e-21 105.9 49 95.9
Solyc00g500184.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 2.3e-21 105.9 73 69.9
Sopen05g012860 Solanum pennellii HOM05D000533 ORTHO05D001069 2.3e-21 105.9 73 69.9
HanXRQChr01g0003461 Helianthus annuus HOM05D000533 ORTHO05D001069 5.1e-21 104.8 50 94.0
Sed0003286 Sechium edule HOM05D000533 ORTHO05D001069 1.9e-20 102.8 49 93.9
Sed0012936 Sechium edule HOM05D000533 ORTHO05D001069 1.9e-20 102.8 49 93.9
unitig_87.g27981 Utricularia gibba HOM05D000533 ORTHO05D001069 1.9e-20 102.8 52 90.4
HanXRQChr10g0297201 Helianthus annuus HOM05D000533 ORTHO05D001069 3.3e-20 102.1 49 93.9
SEGI_01046 Sequoiadendron giganteum HOM05D000533 ORTHO05D001069 5.7e-20 101.3 56 83.9
SEGI_25166 Sequoiadendron giganteum HOM05D000533 ORTHO05D001069 5.7e-20 101.3 56 83.9
PGSC0003DMG400030943 Solanum tuberosum HOM05D000533 ORTHO05D001069 5.7e-20 101.3 52 84.6
Lsat_1_v5_gn_7_67821 Lactuca sativa HOM05D000533 ORTHO05D001069 1.6e-19 99.8 54 81.5
Sopen12g017210 Solanum pennellii HOM05D000533 ORTHO05D001069 3.7e-19 98.6 50 84.0
Nitab4.5_0004030g0010 Nicotiana tabacum HOM05D000533 ORTHO05D001069 4.8e-19 98.2 50 84.0
Nitab4.5_0000172g0870 Nicotiana tabacum HOM05D000533 ORTHO05D001069 8.2e-19 97.4 52 80.8
CANSAT16G0052 Cannabis sativa HOM05D000533 ORTHO05D001069 1.1e-18 97.1 52 86.5
FvH4_2g05080 Fragaria vesca HOM05D000533 ORTHO05D001069 1.1e-18 97.1 52 86.5
FvH4_c1g00130 Fragaria vesca HOM05D000533 ORTHO05D001069 1.1e-18 97.1 52 86.5
FAN20G0581 Fragaria x ananassa HOM05D000533 ORTHO05D001069 1.1e-18 97.1 52 86.5
RcHm_v2.0_MTg0498261 Rosa chinensis HOM05D000533 ORTHO05D001069 1.1e-18 97.1 52 86.5
Lj2A1229G104 Lonicera japonica HOM05D000533 ORTHO05D001069 2.4e-18 95.9 50 88.0
CAN.G267.14 Capsicum annuum HOM05D000533 ORTHO05D001069 4.1e-18 95.1 52 80.8
CAN.G1.13 Capsicum annuum HOM05D000533 ORTHO05D001069 9.0e-18 94.0 52 75.0
PGSC0003DMG400029134 Solanum tuberosum HOM05D000533 ORTHO05D001069 3.4e-17 92.0 72 63.9
GSVIVG01006222001 Vitis vinifera HOM05D000533 ORTHO05D001069 4.5e-17 91.7 74 62.2
CBR_g30873 Chara braunii HOM05D004541 ORTHO05D000800 5.0e-16 88.2 72 62.5
Nitab4.5_0000127g0050 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.4e-15 86.7 50 76.0
AagrBONN_evm.TU.Sc2ySwM_117.4105 Anthoceros agrestis HOM05D000533 ORTHO05D001069 2.5e-15 85.9 52 73.1
CAN.G566.26 Capsicum annuum HOM05D000533 ORTHO05D001069 4.2e-15 85.1 51 76.5
Lsat_1_v5_gn_5_16221 Lactuca sativa HOM05D000533 ORTHO05D001069 5.5e-15 84.7 45 86.7
ATR1155G032 Amborella trichopoda HOM05D000533 ORTHO05D001069 9.4e-15 84.0 52 73.1
Mapoly0011s0058 Marchantia polymorpha HOM05D000533 ORTHO05D001069 6.1e-14 81.3 70 55.7
Nitab4.5_0000172g0890 Nicotiana tabacum HOM05D000533 ORTHO05D001069 2.3e-13 79.3 46 82.6
Nitab4.5_0006806g0120 Nicotiana tabacum HOM05D000533 ORTHO05D001069 3.9e-13 78.6 44 75.0
SMO053G0001 Selaginella moellendorffii HOM05D000533 ORTHO05D001069 5.1e-13 78.2 54 66.7
CAN.G993.10 Capsicum annuum HOM05D000533 ORTHO05D001069 3.3e-12 75.5 42 81.0
PRCOL_00000735 Prasinoderma coloniale HOM05D000533 ORTHO05D001069 9.7e-12 73.9 52 65.4
Cfa022526 Carpinus fangiana HOM05D000533 ORTHO05D001069 2.2e-11 72.8 74 48.6
SHI25676 Sapria himalayana HOM05D000533 ORTHO05D001069 2.8e-11 72.4 32 93.8
Sopen01g027210 Solanum pennellii HOM05D000533 ORTHO05D001069 3.7e-11 72.0 33 87.9
Nitab4.5_0001034g0080 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.1e-10 70.5 40 80.0
Haze_26686 Corylus avellana HOM05D000533 ORTHO05D001069 4.1e-10 68.6 52 57.7
COL.COLO4_01459 Corchorus olitorius HOM05D000533 ORTHO05D001069 5.3e-10 68.2 52 61.5
Haze_27200 Corylus avellana HOM05D000533 ORTHO05D001069 1.5e-09 66.6 50 56.0
ATR1208G001 Amborella trichopoda HOM05D000533 ORTHO05D001069 2.0e-09 66.2 52 55.8
Cre09.g405850 Chlamydomonas reinhardtii HOM05D000533 ORTHO05D001069 2.0e-09 66.2 99 36.4
Haze_21655 Corylus avellana HOM05D004019 ORTHO05D005136 4.5e-09 65.1 47 68.1
FAN26G3352 Fragaria x ananassa HOM05D000533 ORTHO05D001069 1.0e-08 63.9 35 82.9
Solyc09g031550.3 Solanum lycopersicum HOM05D000533 ORTHO05D001069 1.0e-08 63.9 41 63.4
Ah.10g028340 Amaranthus hybridus HOM05D000533 ORTHO05D001069 9.4e-07 57.4 28 92.9
Aqoxy84s002 Aquilegia oxysepala HOM05D000533 ORTHO05D001069 1.2e-06 57.0 111 34.2
Sopen06g023010 Solanum pennellii HOM05D000533 ORTHO05D001069 1.2e-06 57.0 41 68.3


User provided reference genes

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