Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.AKG7GD Arachis hypogaea HOM05D000963 ORTHO05D010073 1.8e-104 382.5 178 100.0
arahy.Tifrunner.gnm1.ann1.V5YKW3 Arachis hypogaea HOM05D000963 ORTHO05D010073 1.8e-104 382.5 178 100.0
arahy.Tifrunner.gnm1.ann1.LW54SX Arachis hypogaea HOM05D000963 ORTHO05D010073 5.7e-103 377.5 177 99.4
arahy.Tifrunner.gnm1.ann1.IG3D37 Arachis hypogaea HOM05D000963 ORTHO05D010073 2.7e-92 342.0 185 89.2
arahy.Tifrunner.gnm1.ann1.3JL12K Arachis hypogaea HOM05D000963 ORTHO05D010073 1.7e-83 312.8 143 100.0
arahy.Tifrunner.gnm1.ann1.9ZA4TL Arachis hypogaea HOM05D000963 ORTHO05D010073 1.7e-83 312.8 143 100.0
arahy.Tifrunner.gnm1.ann1.MCAP06 Arachis hypogaea HOM05D000963 ORTHO05D010073 1.7e-83 312.8 143 100.0
Lsat_1_v5_gn_0_47661 Lactuca sativa HOM05D000963 ORTHO05D010073 1.6e-81 306.2 143 98.6
Lsat_1_v5_gn_2_97101 Lactuca sativa HOM05D000963 ORTHO05D010073 1.6e-81 306.2 143 98.6
Lsat_1_v5_gn_6_94240 Lactuca sativa HOM05D000963 ORTHO05D010073 1.6e-81 306.2 143 98.6
Lsat_1_v5_gn_8_139860 Lactuca sativa HOM05D000963 ORTHO05D010073 1.6e-81 306.2 143 98.6
arahy.Tifrunner.gnm1.ann1.BP3EV9 Arachis hypogaea HOM05D000963 ORTHO05D010073 8.3e-78 293.9 138 96.4
Sc21g0003830 Simmondsia chinensis HOM05D000963 ORTHO05D013492 5.8e-71 271.2 142 90.1
Actinidia28233 Actinidia chinensis HOM05D000963 ORTHO05D010073 1.0e-59 233.8 109 97.2
Sopen10g016580 Solanum pennellii HOM05D000963 ORTHO05D010073 6.6e-59 231.1 146 78.8
arahy.Tifrunner.gnm1.ann1.F7VFKS Arachis hypogaea HOM05D000963 ORTHO05D010073 1.5e-58 229.9 151 76.2
FAN01G1778 Fragaria x ananassa HOM05D000963 ORTHO05D010073 1.1e-53 213.8 109 89.9
Sed0001563 Sechium edule HOM05D000963 ORTHO05D010073 2.4e-53 212.6 147 73.5
Sed0006422 Sechium edule HOM05D000963 ORTHO05D004715 2.4e-53 212.6 147 73.5
Sed0028031 Sechium edule HOM05D000963 ORTHO05D010073 2.4e-53 212.6 147 73.5
Sed0011513 Sechium edule HOM05D000963 ORTHO05D004715 7.1e-53 211.1 147 72.8
Sopen05g013060 Solanum pennellii HOM05D000004 ORTHO05D000002 3.5e-52 208.8 113 85.0
DCAR_001521 Daucus carota HOM05D000963 ORTHO05D010073 1.1e-50 203.8 93 97.8
FAN13G1378 Fragaria x ananassa HOM05D000963 ORTHO05D010073 5.6e-50 201.4 154 66.2
arahy.Tifrunner.gnm1.ann1.H38MEV Arachis hypogaea HOM05D000963 ORTHO05D010073 7.4e-50 201.1 147 70.7
Gohir.A02G134101 Gossypium hirsutum HOM05D000963 ORTHO05D004715 5.3e-48 194.9 147 69.4
arahy.Tifrunner.gnm1.ann1.0FXL97 Arachis hypogaea HOM05D000963 ORTHO05D010073 2.6e-47 192.6 143 69.9
arahy.Tifrunner.gnm1.ann1.WPV0UJ Arachis hypogaea HOM05D000963 ORTHO05D010073 6.4e-46 188.0 143 68.5
CDE02G3457 Ceratophyllum demersum HOM05D000963 ORTHO05D010073 2.4e-45 186.0 143 68.5
QL10p017078 Quercus lobata HOM05D000963 ORTHO05D010073 2.4e-45 186.0 143 68.5
arahy.Tifrunner.gnm1.ann1.L8KA6F Arachis hypogaea HOM05D000963 ORTHO05D010073 1.3e-43 180.3 90 88.9
Lsat_1_v5_gn_2_50801 Lactuca sativa HOM05D000963 ORTHO05D004715 8.7e-43 177.6 81 97.5
Oeu029257.1 Olea europaea HOM05D000963 ORTHO05D010073 2.5e-42 176.0 131 68.7
ECA074G0007 Erigeron canadensis HOM05D000963 ORTHO05D004715 6.2e-41 171.4 80 96.2
ECA074G0008 Erigeron canadensis HOM05D000963 ORTHO05D004715 6.2e-41 171.4 80 96.2
FAN20G2381 Fragaria x ananassa HOM05D000963 ORTHO05D010073 6.9e-40 167.9 83 91.6
FAN06G1734 Fragaria x ananassa HOM05D000963 ORTHO05D010073 2.7e-36 156.0 80 87.5
Gohir.D03G074976 Gossypium hirsutum HOM05D000963 ORTHO05D004715 6.0e-36 154.8 184 50.5
ClCG04G002950 Citrullus lanatus HOM05D000963 ORTHO05D010073 4.3e-34 148.7 77 87.0
Nitab4.5_0007400g0110 Nicotiana tabacum HOM05D000963 ORTHO05D010073 1.3e-33 147.1 87 79.3
arahy.Tifrunner.gnm1.ann1.W1SKJ5 Arachis hypogaea HOM05D000963 ORTHO05D013225 3.7e-33 145.6 69 98.6
Psat3g011600 Pisum sativum HOM05D000963 ORTHO05D010073 1.5e-31 140.2 69 87.0
unitig_91.g26521 Utricularia gibba HOM05D000963 ORTHO05D010201 2.9e-30 136.0 118 62.7
SEGI_18787 Sequoiadendron giganteum HOM05D000963 ORTHO05D010073 5.0e-30 135.2 82 80.5
Psat3g162200 Pisum sativum HOM05D000963 ORTHO05D004715 8.5e-30 134.4 72 81.9
CSS0020252 Camellia sinensis var. sinensis HOM05D000963 ORTHO05D013225 2.5e-29 132.9 114 63.2
Sc09g0006440 Simmondsia chinensis HOM05D000963 ORTHO05D010073 4.2e-29 132.1 65 92.3
SEGI_39281 Sequoiadendron giganteum HOM05D000963 ORTHO05D010073 3.6e-28 129.0 124 58.1
Sopen11g020210 Solanum pennellii HOM05D000963 ORTHO05D013225 4.2e-21 105.5 77 70.1
TPR.G36687 Trifolium pratense HOM05D000963 ORTHO05D010073 1.1e-18 97.4 58 75.9
arahy.Tifrunner.gnm1.ann1.RD3GDK Arachis hypogaea HOM05D000963 ORTHO05D010073 2.0e-18 96.7 45 93.3
Nitab4.5_0006727g0010 Nicotiana tabacum HOM05D000963 ORTHO05D010073 4.4e-18 95.5 51 82.4
Phvul.008G179700 Phaseolus vulgaris HOM05D000963 ORTHO05D010073 9.7e-18 94.4 44 95.5
arahy.Tifrunner.gnm1.ann1.EF1F4B Arachis hypogaea HOM05D000963 ORTHO05D010073 1.1e-16 90.9 160 42.5
SEGI_01254 Sequoiadendron giganteum HOM05D000963 ORTHO05D010073 2.4e-16 89.7 82 61.0
Medtr4g451295 Medicago truncatula HOM05D000963 ORTHO05D010073 7.7e-15 84.7 39 97.4
Medtr5g080940 Medicago truncatula HOM05D000963 ORTHO05D004715 7.7e-15 84.7 39 97.4
Sabra11G0069300 Salix brachista HOM05D000963 ORTHO05D004715 7.7e-15 84.7 39 97.4
Sed0003522 Sechium edule HOM05D000963 ORTHO05D004715 7.7e-15 84.7 39 97.4
Sc25g0002020 Simmondsia chinensis HOM05D000963 ORTHO05D004715 1.0e-14 84.3 61 72.1
FAN08G1097 Fragaria x ananassa HOM05D009256 ORTHO05D011704 2.2e-14 83.2 95 51.6
SEGI_06644 Sequoiadendron giganteum HOM05D009256 ORTHO05D011704 8.5e-14 81.3 140 45.0
SEGI_13999 Sequoiadendron giganteum HOM05D009256 ORTHO05D011704 8.5e-14 81.3 140 45.0
SEGI_16475 Sequoiadendron giganteum HOM05D009256 ORTHO05D011704 8.5e-14 81.3 140 45.0
SEGI_23954 Sequoiadendron giganteum HOM05D009256 ORTHO05D011704 8.5e-14 81.3 140 45.0
Gohir.A12G138580 Gossypium hirsutum HOM05D000963 ORTHO05D010073 3.2e-13 79.3 39 89.7
arahy.Tifrunner.gnm1.ann1.QZF0BL Arachis hypogaea HOM05D009256 ORTHO05D011704 4.2e-13 79.0 117 46.2
BNapus_Darmor_BZH_scaffold_234p00110 Brassica napus HOM05D009256 ORTHO05D011704 4.2e-13 79.0 120 45.0
BraSC77t46657Z Brassica rapa HOM05D009256 ORTHO05D011704 4.2e-13 79.0 120 45.0
arahy.Tifrunner.gnm1.ann1.FXQ5AB Arachis hypogaea HOM05D000963 ORTHO05D010073 5.5e-13 78.6 45 82.2
TAR629G1300 Trochodendron aralioides HOM05D009256 ORTHO05D011704 5.5e-13 78.6 100 49.0
SGA_v2.0_scaffold222G42797 Striga asiatica HOM05D000963 ORTHO05D010073 7.2e-13 78.2 37 94.6
arahy.Tifrunner.gnm1.ann1.Q2LPLX Arachis hypogaea HOM05D009256 ORTHO05D011704 9.4e-13 77.8 94 51.1
arahy.Tifrunner.gnm1.ann1.V5LEJ9 Arachis hypogaea HOM05D009256 ORTHO05D011704 9.4e-13 77.8 94 51.1
arahy.Tifrunner.gnm1.ann1.WH3GKX Arachis hypogaea HOM05D009256 ORTHO05D011704 9.4e-13 77.8 94 51.1
TPR.G11370 Trifolium pratense HOM05D009256 ORTHO05D011704 9.4e-13 77.8 94 51.1
Nitab4.5_0004841g0040 Nicotiana tabacum HOM05D014741 ORTHO05D011787 1.2e-12 77.4 39 84.6
Gorai.011G106300 Gossypium raimondii HOM05D000963 ORTHO05D010073 1.6e-12 77.0 39 87.2
LjContig00319g0016523 Lotus japonicus HOM05D000963 ORTHO05D010073 2.7e-12 76.3 50 78.0
Gohir.A04G039240 Gossypium hirsutum HOM05D000963 ORTHO05D010073 3.6e-12 75.9 35 97.1
Gohir.1Z056500 Gossypium hirsutum HOM05D000963 ORTHO05D010073 1.0e-11 74.3 35 94.3
Medtr4g091430 Medicago truncatula HOM05D009256 ORTHO05D011704 1.0e-11 74.3 117 44.4
Oeu010687.1 Olea europaea HOM05D000963 ORTHO05D010073 3.9e-11 72.4 47 70.2
SEGI_38700 Sequoiadendron giganteum HOM05D009256 ORTHO05D011704 6.7e-11 71.6 122 45.1
EL10Ac4g08799 Beta vulgaris HOM05D000963 ORTHO05D010073 8.8e-11 71.2 35 91.4
arahy.Tifrunner.gnm1.ann1.48BVF8 Arachis hypogaea HOM05D012548 ORTHO05D013225 3.3e-10 69.3 73 57.5
arahy.Tifrunner.gnm1.ann1.6JFP0W Arachis hypogaea HOM05D012548 ORTHO05D013225 3.3e-10 69.3 73 57.5
arahy.Tifrunner.gnm1.ann1.M6PUGS Arachis hypogaea HOM05D012548 ORTHO05D013225 3.3e-10 69.3 73 57.5
Gohir.D04G096660 Gossypium hirsutum HOM05D000963 ORTHO05D010073 3.3e-10 69.3 35 88.6
VMungo1024G0003 Vigna mungo HOM05D009256 ORTHO05D011704 4.4e-10 68.9 75 49.3
Gorai.011G264900 Gossypium raimondii HOM05D000963 ORTHO05D010073 1.7e-09 67.0 32 87.5
Oeu008622.1 Olea europaea HOM05D000866 ORTHO05D000673 1.7e-09 67.0 39 74.4
SEGI_15462 Sequoiadendron giganteum HOM05D009256 ORTHO05D011704 2.2e-09 66.6 92 45.7
Hma1.2p1_0431F.1_g151580 Hydrangea macrophylla HOM05D000963 ORTHO05D010073 1.4e-08 63.9 35 82.9
Gorai.009G238500 Gossypium raimondii HOM05D000963 ORTHO05D010073 4.1e-08 62.4 33 84.8
arahy.Tifrunner.gnm1.ann1.01FKSV Arachis hypogaea HOM05D000890 ORTHO05D000697 2.0e-07 60.1 28 100.0
arahy.Tifrunner.gnm1.ann1.3DS1LI Arachis hypogaea HOM05D004473 ORTHO05D005652 2.0e-07 60.1 38 71.1
arahy.Tifrunner.gnm1.ann1.B9EW81 Arachis hypogaea HOM05D000963 ORTHO05D004715 2.0e-07 60.1 28 100.0
arahy.Tifrunner.gnm1.ann1.SGP77C Arachis hypogaea HOM05D004473 ORTHO05D005652 2.0e-07 60.1 38 71.1
Gorai.007G326100 Gossypium raimondii HOM05D000963 ORTHO05D010073 4.5e-07 58.9 35 80.0
Sopen04g015320 Solanum pennellii HOM05D000004 ORTHO05D000034 2.2e-06 56.6 32 84.4
Lj5C62G3 Lonicera japonica HOM05D003101 ORTHO05D003550 3.8e-06 55.8 27 88.9
Gohir.1Z049892 Gossypium hirsutum HOM05D000963 ORTHO05D010073 5.0e-06 55.5 24 95.8
Nn029s41583 Nelumbo nucifera HOM05D012548 ORTHO05D013225 8.5e-06 54.7 28 92.9
Nn064s42220 Nelumbo nucifera HOM05D012548 ORTHO05D013225 8.5e-06 54.7 28 92.9
Nn212s45205 Nelumbo nucifera HOM05D012548 ORTHO05D013225 8.5e-06 54.7 28 92.9
Nn219s45280 Nelumbo nucifera HOM05D012548 ORTHO05D013225 8.5e-06 54.7 28 92.9
Nn264s45949 Nelumbo nucifera HOM05D012548 ORTHO05D013225 8.5e-06 54.7 28 92.9
Nn304s46231 Nelumbo nucifera HOM05D012548 ORTHO05D013225 8.5e-06 54.7 28 92.9
Nn349s46477 Nelumbo nucifera HOM05D012548 ORTHO05D013225 8.5e-06 54.7 28 92.9
Nn403s46570 Nelumbo nucifera HOM05D012548 ORTHO05D013225 8.5e-06 54.7 28 92.9
Nn442s46690 Nelumbo nucifera HOM05D012548 ORTHO05D013225 8.5e-06 54.7 28 92.9
Nn4g25381 Nelumbo nucifera HOM05D012548 ORTHO05D013225 8.5e-06 54.7 28 92.9


User provided reference genes

Program Settings