Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.AD0ZG9 Arachis hypogaea HOM05D000405 ORTHO05D000712 1.1e-54 216.5 112 100.0
arahy.Tifrunner.gnm1.ann1.LP825N Arachis hypogaea HOM05D000405 ORTHO05D000712 6.1e-42 174.1 100 95.0
Glyma.14G186000 Glycine max HOM05D000405 ORTHO05D000712 2.7e-10 68.9 74 51.4
Glyma.06G142000 Glycine max HOM05D000405 ORTHO05D000712 8.0e-10 67.4 69 58.0
Glyma.14G185800 Glycine max HOM05D000405 ORTHO05D000712 8.0e-10 67.4 76 48.7
arahy.Tifrunner.gnm1.ann1.I9PJJN Arachis hypogaea HOM05D000405 ORTHO05D000712 1.4e-09 66.6 70 60.0
Phvul.008G185800 Phaseolus vulgaris HOM05D000405 ORTHO05D000712 1.4e-09 66.6 70 54.3
arahy.Tifrunner.gnm1.ann1.J88C4R Arachis hypogaea HOM05D000405 ORTHO05D000712 2.3e-09 65.9 70 58.6
Glyma.04G223300 Glycine max HOM05D000405 ORTHO05D000712 6.8e-09 64.3 59 61.0
Psat2g062960 Pisum sativum HOM05D000405 ORTHO05D000712 1.5e-08 63.2 63 58.7
Medtr3g093830 Medicago truncatula HOM05D000405 ORTHO05D000712 2.0e-08 62.8 87 47.1
Phvul.008G185700 Phaseolus vulgaris HOM05D000405 ORTHO05D000712 4.4e-08 61.6 72 50.0
Ca_05519_v3 Cicer arietinum L. HOM05D000405 ORTHO05D000712 7.5e-08 60.8 63 50.8
Psat5g068680 Pisum sativum HOM05D000405 ORTHO05D000712 7.5e-08 60.8 97 44.3
Phvul.009G043100 Phaseolus vulgaris HOM05D000405 ORTHO05D000712 8.3e-07 57.4 54 61.1
CSS0024910 Camellia sinensis var. sinensis HOM05D000405 ORTHO05D000712 1.1e-06 57.0 96 39.6
CSS0040110 Camellia sinensis var. sinensis HOM05D000405 ORTHO05D000712 1.1e-06 57.0 96 39.6
CiPaw.01G307000 Carya illinoinensis HOM05D000405 ORTHO05D000712 1.8e-06 56.2 83 49.4
Lalb_Chr08g0239231 Lupinus albus HOM05D000405 ORTHO05D000712 1.8e-06 56.2 69 47.8
Ca_16860_v3 Cicer arietinum L. HOM05D000405 ORTHO05D000712 3.1e-06 55.5 62 50.0
Ca_29508_v3 Cicer arietinum L. HOM05D000405 ORTHO05D000712 3.1e-06 55.5 62 50.0
Lalb_Chr11g0067751 Lupinus albus HOM05D000405 ORTHO05D000712 5.4e-06 54.7 64 51.6
Duzib114G0997 Durio zibethinus HOM05D000405 ORTHO05D000712 7.0e-06 54.3 78 48.7
Dinv34496 Davidia involucrata HOM05D000405 ORTHO05D000712 9.1e-06 53.9 60 51.7


User provided reference genes

Program Settings