Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.AC3I93 Arachis hypogaea HOM05D007930 ORTHO05D011783 3.6e-80 301.6 160 100.0
arahy.Tifrunner.gnm1.ann1.U1A8WS Arachis hypogaea HOM05D009636 ORTHO05D011783 9.0e-23 110.9 64 92.2
arahy.Tifrunner.gnm1.ann1.49825D Arachis hypogaea HOM05D009636 ORTHO05D011783 1.1e-15 87.4 47 95.7
arahy.Tifrunner.gnm1.ann1.RYJ1YU Arachis hypogaea HOM05D009636 ORTHO05D011783 1.4e-15 87.0 47 95.7
TPR.G25563 Trifolium pratense HOM05D000107 ORTHO05D000062 2.4e-15 86.3 159 39.0
PGSC0003DMG400004241 Solanum tuberosum HOM05D007930 ORTHO05D007166 9.0e-15 84.3 152 39.5
Sopen12g018140 Solanum pennellii HOM05D007930 ORTHO05D007166 1.7e-13 80.1 147 38.8
Sopen11g018950 Solanum pennellii HOM05D000107 ORTHO05D000062 2.9e-13 79.3 145 37.9
Sopen07g016830 Solanum pennellii HOM05D007930 ORTHO05D007166 6.5e-13 78.2 147 38.1
Sopen01g016030 Solanum pennellii HOM05D000014 ORTHO05D000016 1.1e-12 77.4 148 39.2
Sopen10g014360 Solanum pennellii HOM05D007930 ORTHO05D007166 1.1e-12 77.4 147 37.4
arahy.Tifrunner.gnm1.ann1.9P9E4Z Arachis hypogaea HOM05D007930 ORTHO05D011783 1.4e-12 77.0 48 83.3
Sopen08g008350 Solanum pennellii HOM05D007930 ORTHO05D007166 2.5e-12 76.3 151 37.7
Sopen00g009310 Solanum pennellii HOM05D007930 ORTHO05D007166 3.2e-12 75.9 147 38.1
Sopen06g013750 Solanum pennellii HOM05D007930 ORTHO05D007166 7.1e-12 74.7 147 36.1
Sopen10g009350 Solanum pennellii HOM05D007930 ORTHO05D007166 7.1e-12 74.7 150 35.3
arahy.Tifrunner.gnm1.ann1.U1G1DF Arachis hypogaea HOM05D009636 ORTHO05D011783 9.3e-12 74.3 48 81.2
Sopen08g011060 Solanum pennellii HOM05D007930 ORTHO05D007166 9.3e-12 74.3 157 35.7
Sopen02g001050 Solanum pennellii HOM05D007930 ORTHO05D007166 2.1e-11 73.2 147 36.1
Psat4g079480 Pisum sativum HOM05D009811 ORTHO05D007166 2.7e-11 72.8 153 39.2
Sopen05g019850 Solanum pennellii HOM05D007930 ORTHO05D007166 2.7e-11 72.8 146 36.3
arahy.Tifrunner.gnm1.ann1.NC9532 Arachis hypogaea HOM05D009636 ORTHO05D011783 3.5e-11 72.4 42 90.5
Sopen05g025930 Solanum pennellii HOM05D007930 ORTHO05D007166 4.6e-11 72.0 160 35.0
Sopen08g007710 Solanum pennellii HOM05D007930 ORTHO05D007166 4.6e-11 72.0 146 36.3
Sopen08g009350 Solanum pennellii HOM05D007930 ORTHO05D007166 4.6e-11 72.0 133 38.3
Sopen02g002760 Solanum pennellii HOM05D007930 ORTHO05D007166 6.1e-11 71.6 84 44.0
Sopen01g007980 Solanum pennellii HOM05D007930 ORTHO05D007166 7.9e-11 71.2 127 37.0
Sopen04g019100 Solanum pennellii HOM05D007930 ORTHO05D007166 7.9e-11 71.2 160 35.6
Lj1g0024910 Lotus japonicus HOM05D004615 ORTHO05D007166 1.3e-10 70.5 151 34.4
Sopen04g018890 Solanum pennellii HOM05D007930 ORTHO05D007166 1.8e-10 70.1 138 38.4
Sopen08g014940 Solanum pennellii HOM05D000004 ORTHO05D007166 1.8e-10 70.1 147 36.7
Sopen11g012950 Solanum pennellii HOM05D007930 ORTHO05D007166 1.8e-10 70.1 125 40.8
Sopen05g026070 Solanum pennellii HOM05D007930 ORTHO05D007166 3.0e-10 69.3 133 36.8
Sopen06g016400 Solanum pennellii HOM05D007930 ORTHO05D007166 3.0e-10 69.3 165 30.9
PGSC0003DMG400043538 Solanum tuberosum HOM05D007930 ORTHO05D007166 3.0e-10 69.3 85 47.1
Medtr3g055517 Medicago truncatula HOM05D007930 ORTHO05D030188 3.9e-10 68.9 112 37.5
Sopen09g008030 Solanum pennellii HOM05D007930 ORTHO05D007166 3.9e-10 68.9 154 36.4
Psat3g052720 Pisum sativum HOM05D009811 ORTHO05D007166 5.1e-10 68.6 121 39.7
Sopen03g014010 Solanum pennellii HOM05D000014 ORTHO05D000016 8.7e-10 67.8 138 37.7
Sopen07g008330 Solanum pennellii HOM05D007930 ORTHO05D007166 8.7e-10 67.8 153 37.3
Sopen02g002790 Solanum pennellii HOM05D007930 ORTHO05D007166 1.1e-09 67.4 83 43.4
Psat3g053800 Pisum sativum HOM05D009811 ORTHO05D007166 1.5e-09 67.0 146 34.2
Sopen03g018540 Solanum pennellii HOM05D007930 ORTHO05D007166 1.5e-09 67.0 112 38.4
PGSC0003DMG400041847 Solanum tuberosum HOM05D007930 ORTHO05D007166 1.5e-09 67.0 128 35.9
Sopen07g010120 Solanum pennellii HOM05D000014 ORTHO05D000016 2.5e-09 66.2 124 37.1
Sopen03g013860 Solanum pennellii HOM05D000004 ORTHO05D007166 4.3e-09 65.5 147 35.4
arahy.Tifrunner.gnm1.ann1.I09TK8 Arachis hypogaea HOM05D009636 ORTHO05D011783 1.3e-08 63.9 45 75.6
Sopen05g024480 Solanum pennellii HOM05D007930 ORTHO05D007166 1.3e-08 63.9 147 32.7
Sopen08g014730 Solanum pennellii HOM05D007930 ORTHO05D007166 1.3e-08 63.9 85 43.5
Phvul.L001738 Phaseolus vulgaris HOM05D008859 ORTHO05D007166 1.6e-08 63.5 125 32.0
Lj2g0009854 Lotus japonicus HOM05D008859 ORTHO05D007166 2.2e-08 63.2 151 29.8
PGSC0003DMG400044598 Solanum tuberosum HOM05D007930 ORTHO05D007166 2.2e-08 63.2 93 33.3
Sopen10g018630 Solanum pennellii HOM05D007930 ORTHO05D007166 3.7e-08 62.4 151 33.8
PGSC0003DMG400046611 Solanum tuberosum HOM05D007930 ORTHO05D007166 4.8e-08 62.0 117 38.5
Psat7g230640 Pisum sativum HOM05D008859 ORTHO05D007166 8.2e-08 61.2 127 38.6
PGSC0003DMG400042507 Solanum tuberosum HOM05D007930 ORTHO05D007166 1.4e-07 60.5 111 38.7
Sopen09g024560 Solanum pennellii HOM05D000107 ORTHO05D000062 2.4e-07 59.7 131 36.6
TPR.G7595 Trifolium pratense HOM05D008859 ORTHO05D007166 2.4e-07 59.7 82 45.1
Sopen11g021520 Solanum pennellii HOM05D007930 ORTHO05D007166 3.1e-07 59.3 147 33.3
Sopen12g016200 Solanum pennellii HOM05D007930 ORTHO05D007166 3.1e-07 59.3 137 33.6
Psat5g236880 Pisum sativum HOM05D008859 ORTHO05D007166 6.9e-07 58.2 132 31.8
Psat7g204000 Pisum sativum HOM05D008859 ORTHO05D007166 6.9e-07 58.2 132 31.8
Sopen12g015810 Solanum pennellii HOM05D007930 ORTHO05D007166 1.2e-06 57.4 110 38.2
Psat5g270240 Pisum sativum HOM05D008859 ORTHO05D007166 2.0e-06 56.6 132 31.8
Phvul.010G109450 Phaseolus vulgaris HOM05D008859 ORTHO05D007166 2.6e-06 56.2 126 33.3
Sopen01g021020 Solanum pennellii HOM05D000107 ORTHO05D009932 2.6e-06 56.2 109 39.4
Sopen01g009500 Solanum pennellii HOM05D007930 ORTHO05D007166 3.4e-06 55.8 49 55.1
Ca_22878_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 4.5e-06 55.5 154 31.8
Sopen01g024790 Solanum pennellii HOM05D007930 ORTHO05D007166 4.5e-06 55.5 52 53.8
TPR.G18975 Trifolium pratense HOM05D007930 ORTHO05D030188 5.9e-06 55.1 54 51.9
Psat7g163400 Pisum sativum HOM05D008859 ORTHO05D007166 7.7e-06 54.7 132 30.3


User provided reference genes

Program Settings