Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.AAV4SA Arachis hypogaea HOM05D006101 ORTHO05D007422 3.1e-47 191.4 95 100.0
arahy.Tifrunner.gnm1.ann1.PH2QKZ Arachis hypogaea HOM05D006101 ORTHO05D007422 4.5e-22 107.8 70 78.6
Glyma.12G080600 Glycine max HOM05D006101 ORTHO05D007422 3.2e-20 101.7 70 74.3
arahy.Tifrunner.gnm1.ann1.P58SHS Arachis hypogaea HOM05D006101 ORTHO05D007422 3.0e-18 95.1 101 54.5
arahy.Tifrunner.gnm1.ann1.V5BWPF Arachis hypogaea HOM05D006101 ORTHO05D007422 8.8e-18 93.6 101 53.5
arahy.Tifrunner.gnm1.ann1.66BK9V Arachis hypogaea HOM05D006101 ORTHO05D007422 3.7e-16 88.2 97 53.6
Lj3g0002990 Lotus japonicus HOM05D006101 ORTHO05D007422 1.6e-14 82.8 101 47.5
Medtr4g057493 Medicago truncatula HOM05D006101 ORTHO05D007422 4.5e-14 81.3 101 45.5
Phvul.011G085500 Phaseolus vulgaris HOM05D006101 ORTHO05D007422 3.2e-12 75.1 101 44.6
Glyma.11G193400 Glycine max HOM05D006101 ORTHO05D007422 5.5e-12 74.3 105 46.7
Atru.chr3.3528 Acer truncatum HOM05D006101 ORTHO05D007422 9.5e-12 73.6 101 43.6
Psat0s1387g0080 Pisum sativum HOM05D006101 ORTHO05D007422 2.8e-11 72.0 101 42.6
VMungo1127G1509 Vigna mungo HOM05D006101 ORTHO05D007422 1.4e-10 69.7 101 41.6
Lalb_Chr19g0136961 Lupinus albus HOM05D006101 ORTHO05D007422 1.8e-10 69.3 105 43.8
VMungo1215G2511 Vigna mungo HOM05D006101 ORTHO05D007422 4.0e-10 68.2 101 40.6
Potri.009G006200 Populus trichocarpa HOM05D006101 ORTHO05D007422 5.2e-10 67.8 102 40.2
Ca_02469_v3 Cicer arietinum L. HOM05D006101 ORTHO05D007422 1.2e-09 66.6 96 41.7
Ca_30122_v3 Cicer arietinum L. HOM05D006101 ORTHO05D007422 1.2e-09 66.6 96 41.7
Dinv16214 Davidia involucrata HOM05D006101 ORTHO05D007422 1.2e-09 66.6 108 42.6
Nitab4.5_0003880g0040 Nicotiana tabacum HOM05D006101 ORTHO05D007422 2.0e-09 65.9 63 47.6
TAR636G3121 Trochodendron aralioides HOM05D006101 ORTHO05D007422 5.7e-09 64.3 101 38.6
Haze_23705 Corylus avellana HOM05D006101 ORTHO05D007422 9.8e-09 63.5 108 40.7
Prupe.6G111800 Prunus persica HOM05D006101 ORTHO05D007422 1.3e-08 63.2 101 35.6
Cfa010291 Carpinus fangiana HOM05D006101 ORTHO05D007422 1.7e-08 62.8 107 40.2
Gohir.D03G139000 Gossypium hirsutum HOM05D006101 ORTHO05D007422 1.7e-08 62.8 102 37.3
Dinv29372 Davidia involucrata HOM05D006101 ORTHO05D007422 2.2e-08 62.4 106 42.5
Gorai.003G145800 Gossypium raimondii HOM05D006101 ORTHO05D007422 2.2e-08 62.4 101 37.6
RcHm_v2.0_Chr5g0056961 Rosa chinensis HOM05D006101 ORTHO05D007422 2.2e-08 62.4 101 38.6
arahy.Tifrunner.gnm1.ann1.KT1YEE Arachis hypogaea HOM05D032090 ORTHO05D007422 2.8e-08 62.0 47 66.0
CiPaw.13G123600 Carya illinoinensis HOM05D006101 ORTHO05D007422 4.9e-08 61.2 107 39.3
Gohir.A03G029500 Gossypium hirsutum HOM05D006101 ORTHO05D007422 6.3e-08 60.8 101 36.6
THA.LOC104800579 Tarenaya hassleriana HOM05D006101 ORTHO05D007422 6.3e-08 60.8 101 35.6
Lj2C1009G5 Lonicera japonica HOM05D006101 ORTHO05D007422 8.3e-08 60.5 116 37.1
MD11G1147300 Malus domestica HOM05D006101 ORTHO05D007422 8.3e-08 60.5 101 35.6
arahy.Tifrunner.gnm1.ann1.KM9ELV Arachis hypogaea HOM05D006101 ORTHO05D007422 1.4e-07 59.7 34 79.4
Hund08365 Selenicereus undatus HOM05D006101 ORTHO05D007422 1.8e-07 59.3 52 51.9
GSVIVG01031479001 Vitis vinifera HOM05D006101 ORTHO05D007422 1.8e-07 59.3 85 42.4
CSS0026133 Camellia sinensis var. sinensis HOM05D006101 ORTHO05D007422 4.1e-07 58.2 101 38.6
Duzib150G0708 Durio zibethinus HOM05D006101 ORTHO05D007422 4.1e-07 58.2 101 37.6
Nn2g13844 Nelumbo nucifera HOM05D006101 ORTHO05D007422 4.1e-07 58.2 101 34.7
QL01p015279 Quercus lobata HOM05D006101 ORTHO05D007422 4.1e-07 58.2 93 38.7
Thecc.09G350300 Theobroma cacao HOM05D006101 ORTHO05D007422 4.1e-07 58.2 101 35.6
Hma1.2p1_0051F.1_g029390 Hydrangea macrophylla HOM05D006101 ORTHO05D007422 7.0e-07 57.4 106 39.6
Sabra09G0003500 Salix brachista HOM05D006101 ORTHO05D007422 7.0e-07 57.4 101 35.6
CSS0020443 Camellia sinensis var. sinensis HOM05D006101 ORTHO05D007422 1.2e-06 56.6 100 40.0
Manes.04G013700 Manihot esculenta HOM05D006101 ORTHO05D007422 1.2e-06 56.6 101 34.7
COL.COLO4_11107 Corchorus olitorius HOM05D006101 ORTHO05D007422 4.5e-06 54.7 89 37.1
PSO063G0796 Papaver somniferum HOM05D006101 ORTHO05D007422 4.5e-06 54.7 102 35.3
FAN11G1700 Fragaria x ananassa HOM05D002446 ORTHO05D007422 7.8e-06 53.9 105 35.2


User provided reference genes

Program Settings