Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.AA2XIP Arachis hypogaea HOM05D004903 ORTHO05D005849 2.4e-156 555.4 281 100.0
arahy.Tifrunner.gnm1.ann1.97GHXX Arachis hypogaea HOM05D004903 ORTHO05D005849 5.6e-137 491.1 281 89.7
arahy.Tifrunner.gnm1.ann1.HDKQ14 Arachis hypogaea HOM05D004903 ORTHO05D005849 9.3e-132 473.8 301 82.7
arahy.Tifrunner.gnm1.ann1.M9BVNS Arachis hypogaea HOM05D004903 ORTHO05D005849 4.6e-131 471.5 281 86.1
arahy.Tifrunner.gnm1.ann1.3XU7EE Arachis hypogaea HOM05D004903 ORTHO05D005849 7.4e-129 464.2 281 83.6
arahy.Tifrunner.gnm1.ann1.ZQ2A8X Arachis hypogaea HOM05D004903 ORTHO05D005849 1.2e-123 446.8 301 79.1
arahy.Tifrunner.gnm1.ann1.5Z4EMJ Arachis hypogaea HOM05D004903 ORTHO05D005849 2.8e-112 409.1 281 76.5
Lj3g0025901 Lotus japonicus HOM05D004903 ORTHO05D005849 1.9e-105 386.3 281 72.2
Glyma.07G046600 Glycine max HOM05D004903 ORTHO05D005849 7.4e-105 384.4 281 71.2
Medtr8g023500 Medicago truncatula HOM05D004903 ORTHO05D005849 5.3e-103 378.3 288 66.7
Lalb_Chr17g0343171 Lupinus albus HOM05D004903 ORTHO05D005849 4.2e-100 368.6 281 68.7
Psat4g164720 Pisum sativum HOM05D004903 ORTHO05D005849 4.4e-97 358.6 281 65.8
Glyma.16G015600 Glycine max HOM05D004903 ORTHO05D005849 4.8e-96 355.1 281 68.0
Phvul.010G122300 Phaseolus vulgaris HOM05D004903 ORTHO05D005849 6.3e-96 354.8 280 66.4
CiPaw.01G210600 Carya illinoinensis HOM05D004903 ORTHO05D005849 3.3e-89 332.4 277 62.1
TPR.G15248 Trifolium pratense HOM05D004903 ORTHO05D005849 2.2e-88 329.7 221 72.9
QL05p000658 Quercus lobata HOM05D004903 ORTHO05D005849 8.2e-88 327.8 279 60.9
Ca_23466_v3 Cicer arietinum L. HOM05D004903 ORTHO05D005849 1.8e-87 326.6 231 72.3
QL05p000751 Quercus lobata HOM05D004903 ORTHO05D005849 1.2e-86 323.9 278 60.4
CSS0022789 Camellia sinensis var. sinensis HOM05D004903 ORTHO05D005849 1.2e-83 313.9 282 59.6
VMungo0331G0875 Vigna mungo HOM05D004903 ORTHO05D005849 1.8e-82 310.1 227 69.2
Dinv20374 Davidia involucrata HOM05D004903 ORTHO05D005849 4.0e-82 308.9 285 57.5
Atru.chr1.4170 Acer truncatum HOM05D004903 ORTHO05D005849 1.2e-81 307.4 278 58.3
Actinidia25997 Actinidia chinensis HOM05D004903 ORTHO05D005849 2.6e-81 306.2 281 58.0
MD09G1171800 Malus domestica HOM05D004903 ORTHO05D005849 3.3e-81 305.8 285 57.9
MD17G1155200 Malus domestica HOM05D004903 ORTHO05D005849 7.5e-81 304.7 284 59.2
TAR624G0709 Trochodendron aralioides HOM05D004903 ORTHO05D005849 9.7e-81 304.3 278 56.5
Potri.001G161800 Populus trichocarpa HOM05D004903 ORTHO05D005849 1.3e-80 303.9 278 55.8
TWI59G0350 Tripterygium wilfordii HOM05D004903 ORTHO05D005849 2.8e-80 302.8 288 56.2
Prupe.3G030200 Prunus persica HOM05D004903 ORTHO05D005849 8.2e-80 301.2 284 56.7
Hund18627 Selenicereus undatus HOM05D004903 ORTHO05D005849 8.2e-80 301.2 277 56.0
Duzib160G0805 Durio zibethinus HOM05D004903 ORTHO05D005849 1.4e-79 300.4 275 55.6
Thecc.06G131400 Theobroma cacao HOM05D004903 ORTHO05D005849 1.4e-79 300.4 275 56.7
AUR62001391 Chenopodium quinoa HOM05D004903 ORTHO05D005849 4.1e-79 298.9 279 55.6
FAN02G0327 Fragaria x ananassa HOM05D004903 ORTHO05D005849 9.1e-79 297.7 285 57.9
FAN14G1686 Fragaria x ananassa HOM05D004903 ORTHO05D005849 9.1e-79 297.7 289 57.1
FAN14G0435 Fragaria x ananassa HOM05D004903 ORTHO05D005849 1.2e-78 297.4 285 56.5
EL10Ac7g18248 Beta vulgaris HOM05D004903 ORTHO05D005849 1.6e-78 297.0 277 56.3
FAN09G2808 Fragaria x ananassa HOM05D004903 ORTHO05D005849 1.6e-78 297.0 289 55.7
Gorai.010G172600 Gossypium raimondii HOM05D004903 ORTHO05D005849 1.6e-78 297.0 277 57.4
RcHm_v2.0_Chr2g0148141 Rosa chinensis HOM05D004903 ORTHO05D005849 2.0e-78 296.6 289 56.4
Gohir.A06G142500 Gossypium hirsutum HOM05D004903 ORTHO05D005849 3.5e-78 295.8 277 57.4
DCAR_022636 Daucus carota HOM05D004903 ORTHO05D005849 1.3e-77 293.9 287 55.7
FvH4_6g36070 Fragaria vesca HOM05D004903 ORTHO05D005849 2.2e-77 293.1 287 55.1
GSVIVG01016657001 Vitis vinifera HOM05D004903 ORTHO05D005849 3.8e-77 292.4 279 52.3
CANSAT56G0172 Cannabis sativa HOM05D004903 ORTHO05D005849 5.0e-77 292.0 280 56.1
Manes.11G011500 Manihot esculenta HOM05D004903 ORTHO05D005849 6.5e-77 291.6 278 55.8
AT1G53760 Arabidopsis thaliana HOM05D004903 ORTHO05D005849 1.1e-76 290.8 275 56.4
Peaxi162Scf00207g01534 Petunia axillaris HOM05D004903 ORTHO05D005849 1.1e-76 290.8 281 56.2
Solyc06g063130.3 Solanum lycopersicum HOM05D004903 ORTHO05D005849 2.5e-76 289.7 283 54.8
THA.LOC104810400 Tarenaya hassleriana HOM05D004903 ORTHO05D005849 3.2e-76 289.3 275 56.7
Ciclev10026250m.g Citrus clementina HOM05D004903 ORTHO05D005849 4.2e-76 288.9 280 56.8
PGSC0003DMG400004869 Solanum tuberosum HOM05D004903 ORTHO05D005849 5.5e-76 288.5 283 54.4
Sopen06g022580 Solanum pennellii HOM05D004903 ORTHO05D005849 1.2e-75 287.3 283 54.4
HanXRQChr12g0360041 Helianthus annuus HOM05D004903 ORTHO05D005849 3.6e-75 285.8 278 54.7
Nitab4.5_0006190g0020 Nicotiana tabacum HOM05D004903 ORTHO05D005849 3.6e-75 285.8 281 54.4
Thhalv10011709m.g Eutrema salsugineum HOM05D004903 ORTHO05D005849 4.7e-75 285.4 276 55.8
CAN.G1633.2 Capsicum annuum HOM05D004903 ORTHO05D005849 6.1e-75 285.0 278 54.7
Gohir.D06G202400 Gossypium hirsutum HOM05D004903 ORTHO05D005849 8.0e-75 284.6 275 53.5
Gorai.010G236300 Gossypium raimondii HOM05D004903 ORTHO05D005849 1.0e-74 284.3 275 53.5
Lsat_1_v5_gn_5_137641 Lactuca sativa HOM05D004903 ORTHO05D005849 1.0e-74 284.3 272 57.0
Actinidia24416 Actinidia chinensis HOM05D004903 ORTHO05D005849 1.4e-74 283.9 290 53.4
Aqoxy7G00919 Aquilegia oxysepala HOM05D004903 ORTHO05D005849 1.8e-74 283.5 282 52.1
AL1G62450 Arabidopsis lyrata HOM05D004903 ORTHO05D005849 4.0e-74 282.3 283 55.1
SalBow6G3230 Salvia bowleyana HOM05D004903 ORTHO05D005849 1.2e-73 280.8 278 54.7
Carub.0001s4303 Capsella rubella HOM05D004903 ORTHO05D005849 2.0e-73 280.0 275 53.8
ClCG09G001430 Citrullus lanatus HOM05D004903 ORTHO05D005849 2.0e-73 280.0 285 53.7
Nn8g38503 Nelumbo nucifera HOM05D004903 ORTHO05D005849 2.0e-73 280.0 278 56.1
CARHR044070 Cardamine hirsuta HOM05D004903 ORTHO05D005849 2.6e-73 279.6 281 54.4
C06p09540 Brassica napus HOM05D004903 ORTHO05D005849 5.7e-73 278.5 275 55.3
BolC6t36028H Brassica oleracea HOM05D004903 ORTHO05D005849 5.7e-73 278.5 275 55.3
Eucgr.J02586 Eucalyptus grandis HOM05D004903 ORTHO05D005849 5.7e-73 278.5 283 55.5
BcaB02g10893 Brassica carinata HOM05D004903 ORTHO05D005849 7.5e-73 278.1 275 53.5
BcaC08g43554 Brassica carinata HOM05D004903 ORTHO05D005849 9.8e-73 277.7 275 54.5
PSO135G0609 Papaver somniferum HOM05D004903 ORTHO05D005849 2.8e-72 276.2 275 51.3
A06p00790 Brassica napus HOM05D004903 ORTHO05D005849 3.7e-72 275.8 275 54.5
A05p17920 Brassica napus HOM05D004903 ORTHO05D005849 4.8e-72 275.4 275 54.2
BraA06t23313Z Brassica rapa HOM05D004903 ORTHO05D005849 4.8e-72 275.4 275 54.5
COL.COLO4_30880 Corchorus olitorius HOM05D004903 ORTHO05D005849 4.8e-72 275.4 222 62.2
CsaV3_7G033900 Cucumis sativus L. HOM05D004903 ORTHO05D005849 4.8e-72 275.4 284 52.5
Migut.I01143 Erythranthe guttata HOM05D004903 ORTHO05D005849 6.3e-72 275.0 281 54.1
BolC6t36703H Brassica oleracea HOM05D004903 ORTHO05D005849 1.4e-71 273.9 275 53.8
BraA05t20686Z Brassica rapa HOM05D004903 ORTHO05D005849 1.4e-71 273.9 275 53.8
PSO724G0850 Papaver somniferum HOM05D004903 ORTHO05D005849 1.4e-71 273.9 275 51.3
C06p15280 Brassica napus HOM05D004903 ORTHO05D005849 1.8e-71 273.5 275 53.8
BcaB07g33303 Brassica carinata HOM05D004903 ORTHO05D005849 3.1e-71 272.7 275 53.8
Gohir.A06G194700 Gossypium hirsutum HOM05D004903 ORTHO05D005849 3.1e-71 272.7 275 52.0
Sed0027894 Sechium edule HOM05D004903 ORTHO05D005849 5.4e-71 271.9 285 53.0
vmacro18714 Vaccinium macrocarpon HOM05D004903 ORTHO05D005849 9.1e-71 271.2 282 52.5
BcaC08g44129 Brassica carinata HOM05D004903 ORTHO05D005849 1.6e-70 270.4 275 53.5
Sp1g40280 Schrenkiella parvula HOM05D004903 ORTHO05D005849 2.7e-70 269.6 275 53.1
MSTRG.10905 Avicennia marina HOM05D004903 ORTHO05D005849 1.1e-68 264.2 288 51.4
Gorai.011G054300 Gossypium raimondii HOM05D004903 ORTHO05D005849 1.5e-68 263.8 225 60.4
Rhsim08G0245600 Rhododendron simsii HOM05D004903 ORTHO05D005849 1.5e-68 263.8 233 59.2
Lj5A28T47 Lonicera japonica HOM05D004903 ORTHO05D005849 1.9e-68 263.5 335 45.4
Sc12g0011010 Simmondsia chinensis HOM05D004903 ORTHO05D005849 2.5e-68 263.1 261 54.4
Cpa.g.sc25.203 Carica papaya HOM05D004903 ORTHO05D005849 3.2e-68 262.7 189 68.3
Sabra03G0044200 Salix brachista HOM05D004903 ORTHO05D005849 1.2e-67 260.8 309 48.2
Aa31LG10G1530 Aethionema arabicum HOM05D000070 ORTHO05D003301 2.1e-67 260.0 258 53.5
Nitab4.5_0010570g0050 Nicotiana tabacum HOM05D004903 ORTHO05D005849 1.0e-66 257.7 279 49.5
AUR62025608 Chenopodium quinoa HOM05D004903 ORTHO05D005849 6.8e-66 255.0 271 51.3
Cc04_g00600 Coffea canephora HOM05D004903 ORTHO05D005849 2.6e-65 253.1 284 48.6
unitig_32.g11002 Utricularia gibba HOM05D004903 ORTHO05D005849 9.8e-65 251.1 288 45.1
Cfa003452 Carpinus fangiana HOM05D004903 ORTHO05D005849 1.8e-63 246.9 210 63.3
ATR0006G080 Amborella trichopoda HOM05D004903 ORTHO05D005849 1.2e-62 244.2 274 47.8
Hma1.2p1_1999F.1_g310500 Hydrangea macrophylla HOM05D004903 ORTHO05D005849 5.9e-62 241.9 187 62.0
SGA_v2.0_scaffold71G23946 Striga asiatica HOM05D004903 ORTHO05D005849 2.9e-61 239.6 292 48.6
ECA234G0009 Erigeron canadensis HOM05D004903 ORTHO05D005849 5.0e-61 238.8 221 57.5
HPP92_000828 Vanilla planifolia HOM05D004903 ORTHO05D005849 5.0e-61 238.8 278 48.6
Zm00001eb207930 Zea mays HOM05D004903 ORTHO05D005849 6.6e-61 238.4 275 45.1
MELO3C024303.2 Cucumis melo HOM05D004903 ORTHO05D005849 2.5e-60 236.5 197 59.4
Hma1.2p1_0090F.1_g045680 Hydrangea macrophylla HOM05D004903 ORTHO05D005849 2.5e-60 236.5 212 59.9
Os02g0152600 Oryza sativa ssp. japonica HOM05D004903 ORTHO05D005849 3.3e-60 236.1 280 44.6
Oeu053414.1 Olea europaea HOM05D004903 ORTHO05D005849 5.6e-60 235.3 226 53.1
Sabra01G0130700 Salix brachista HOM05D004903 ORTHO05D005849 7.3e-60 235.0 302 47.4
Dinv37814 Davidia involucrata HOM05D004903 ORTHO05D005849 9.5e-60 234.6 212 59.4
MBI17_g12875_MAGBIO Magnolia biondii HOM05D004903 ORTHO05D005849 3.7e-56 222.6 278 43.2
Oeu019513.1 Olea europaea HOM05D004903 ORTHO05D005849 1.1e-55 221.1 194 54.6
Sed0021101 Sechium edule HOM05D004903 ORTHO05D005849 1.2e-54 217.6 207 57.0
Gohir.A10G050050 Gossypium hirsutum HOM05D004903 ORTHO05D005849 1.0e-53 214.5 263 49.4
Actinidia31143 Actinidia chinensis HOM05D004903 ORTHO05D005849 1.2e-51 207.6 216 52.8
CDE06G0378 Ceratophyllum demersum HOM05D004903 ORTHO05D005849 4.0e-50 202.6 228 45.2
Gohir.D10G050650 Gossypium hirsutum HOM05D004903 ORTHO05D005849 9.8e-49 198.0 165 59.4
CDE04G1042 Ceratophyllum demersum HOM05D004903 ORTHO05D005849 1.3e-48 197.6 232 46.6
Mapoly0021s0048 Marchantia polymorpha HOM05D004903 ORTHO05D005849 3.2e-39 166.4 282 35.1
arahy.Tifrunner.gnm1.ann1.RS9BE1 Arachis hypogaea HOM05D004903 ORTHO05D005849 4.1e-39 166.0 105 79.0
arahy.Tifrunner.gnm1.ann1.AT31DH Arachis hypogaea HOM05D004903 ORTHO05D005849 4.6e-38 162.5 96 82.3
AagrBONN_evm.TU.Sc2ySwM_228.2429 Anthoceros agrestis HOM05D004903 ORTHO05D005849 1.7e-37 160.6 226 37.6
Haze_16148 Corylus avellana HOM05D003205 ORTHO05D003746 1.4e-34 151.0 195 46.7
THA.LOC104822767 Tarenaya hassleriana HOM05D006671 ORTHO05D008637 1.8e-34 150.6 247 39.3
Gohir.D06G148232 Gossypium hirsutum HOM05D004903 ORTHO05D005849 5.8e-33 145.6 116 61.2
Haze_16144 Corylus avellana HOM05D003205 ORTHO05D003746 7.6e-33 145.2 195 47.2
CBR_g34164 Chara braunii HOM05D004903 ORTHO05D005849 9.9e-33 144.8 212 37.3
BcaB07g32153 Brassica carinata HOM05D004903 ORTHO05D005849 9.2e-31 138.3 120 57.5
BcaB02g07096 Brassica carinata HOM05D000219 ORTHO05D000226 2.7e-30 136.7 117 58.1
Pp3c13_9790 Physcomitrium patens HOM05D004903 ORTHO05D005849 3.2e-23 113.2 277 30.0
Gohir.D02G109866 Gossypium hirsutum HOM05D004903 ORTHO05D005849 2.5e-20 103.6 88 58.0
TPR.G26438 Trifolium pratense HOM05D004903 ORTHO05D005849 7.3e-20 102.1 71 64.8
SEGI_28585 Sequoiadendron giganteum HOM05D004903 ORTHO05D005849 6.2e-19 99.0 124 41.1
SEGI_38260 Sequoiadendron giganteum HOM05D004903 ORTHO05D005849 6.2e-19 99.0 133 39.8
CDE06G0441 Ceratophyllum demersum HOM05D004903 ORTHO05D005849 5.3e-18 95.9 85 54.1
Glyma.16G014900 Glycine max HOM05D004903 ORTHO05D005849 9.9e-17 91.7 98 56.1
Cre08.g358557 Chlamydomonas reinhardtii HOM05D004903 ORTHO05D005849 3.2e-15 86.7 200 28.5
arahy.Tifrunner.gnm1.ann1.1E2DFU Arachis hypogaea HOM05D001485 ORTHO05D005849 1.8e-13 80.9 49 85.7
Hma1.2p1_0090F.1_g045690 Hydrangea macrophylla HOM05D004903 ORTHO05D005849 7.4e-12 75.5 73 54.8
PRCOL_00005128 Prasinoderma coloniale HOM05D004903 ORTHO05D005849 3.1e-10 70.1 138 35.5
Duzib192G1079 Durio zibethinus HOM05D004903 ORTHO05D005849 4.0e-10 69.7 205 29.3
MCO07G235 Micromonas commoda HOM05D004903 ORTHO05D005849 9.0e-10 68.6 126 29.4
arahy.Tifrunner.gnm1.ann1.ZRCJ38 Arachis hypogaea HOM05D004903 ORTHO05D005849 1.3e-08 64.7 65 60.0
TPR.G14723 Trifolium pratense HOM05D004903 ORTHO05D005849 3.2e-07 60.1 35 82.9


User provided reference genes

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