Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.6MMU9N Arachis hypogaea HOM05D000963 ORTHO05D010201 1.0e-128 463.4 228 100.0
arahy.Tifrunner.gnm1.ann1.A86CS8 Arachis hypogaea HOM05D000963 ORTHO05D010201 1.0e-128 463.4 228 100.0
arahy.Tifrunner.gnm1.ann1.JP0X74 Arachis hypogaea HOM05D000963 ORTHO05D010201 1.4e-122 443.0 218 100.0
Sed0024925 Sechium edule HOM05D000963 ORTHO05D010201 1.2e-105 386.7 231 86.6
Sed0016068 Sechium edule HOM05D000963 ORTHO05D010201 4.2e-90 335.1 245 75.9
arahy.Tifrunner.gnm1.ann1.AH21CB Arachis hypogaea HOM05D000963 ORTHO05D010658 9.0e-85 317.4 191 84.8
Sed0018152 Sechium edule HOM05D000963 ORTHO05D010201 1.8e-80 303.1 193 82.9
SHI36393 Sapria himalayana HOM05D000963 ORTHO05D010201 2.5e-79 299.3 207 78.3
Gohir.A02G134101 Gossypium hirsutum HOM05D000963 ORTHO05D004715 2.9e-75 285.8 208 75.5
arahy.Tifrunner.gnm1.ann1.4AG4F3 Arachis hypogaea HOM05D000963 ORTHO05D010201 4.2e-74 282.0 228 67.5
Gohir.D03G074976 Gossypium hirsutum HOM05D000963 ORTHO05D004715 4.7e-65 251.9 207 69.6
arahy.Tifrunner.gnm1.ann1.DWP51K Arachis hypogaea HOM05D000963 ORTHO05D007321 1.1e-58 230.7 142 83.8
Nitab4.5_0007400g0050 Nicotiana tabacum HOM05D000963 ORTHO05D010201 1.2e-44 184.1 143 67.8
ECA074G0007 Erigeron canadensis HOM05D000963 ORTHO05D004715 1.6e-44 183.7 119 82.4
QL05p067011 Quercus lobata HOM05D000074 ORTHO05D001262 1.1e-42 177.6 113 82.3
VMungo0251G2421 Vigna mungo HOM05D000963 ORTHO05D010201 1.2e-39 167.5 121 74.4
PGSC0003DMG400039021 Solanum tuberosum HOM05D000963 ORTHO05D010201 2.6e-39 166.4 112 79.5
Nitab4.5_0002363g0010 Nicotiana tabacum HOM05D000963 ORTHO05D010201 1.6e-36 157.1 195 51.3
Lsat_1_v5_gn_6_94280 Lactuca sativa HOM05D000963 ORTHO05D010201 2.0e-36 156.8 167 58.7
Lsat_1_v5_gn_3_5060 Lactuca sativa HOM05D000963 ORTHO05D010201 2.3e-35 153.3 112 75.0
arahy.Tifrunner.gnm1.ann1.IG3D37 Arachis hypogaea HOM05D000963 ORTHO05D010073 3.6e-33 146.0 70 98.6
BraSC25t45902Z Brassica rapa HOM05D000963 ORTHO05D010201 4.7e-33 145.6 86 86.0
Oeu015131.2 Olea europaea HOM05D000963 ORTHO05D004715 1.8e-32 143.7 236 46.2
BraSC138t45526Z Brassica rapa HOM05D000963 ORTHO05D010201 2.3e-32 143.3 73 95.9
Lsat_1_v5_gn_5_181901 Lactuca sativa HOM05D000963 ORTHO05D004715 4.0e-32 142.5 73 95.9
Lsat_1_v5_gn_5_4701 Lactuca sativa HOM05D000963 ORTHO05D004715 2.0e-31 140.2 73 94.5
unitig_87.g27918 Utricularia gibba HOM05D000963 ORTHO05D010201 2.0e-31 140.2 73 94.5
unitig_87.g28034 Utricularia gibba HOM05D000963 ORTHO05D010201 2.0e-31 140.2 73 94.5
unitig_91.g26521 Utricularia gibba HOM05D000963 ORTHO05D010201 2.0e-31 140.2 73 94.5
ECA074G0008 Erigeron canadensis HOM05D000963 ORTHO05D004715 5.7e-31 138.7 73 94.5
Lsat_1_v5_gn_0_29380 Lactuca sativa HOM05D000963 ORTHO05D010201 1.7e-30 137.1 73 93.2
Oeu053980.2 Olea europaea HOM05D000963 ORTHO05D010201 4.9e-30 135.6 73 90.4
Migut.D01397 Erythranthe guttata HOM05D000963 ORTHO05D010201 1.8e-29 133.7 110 65.5
Atru.chr11.485 Acer truncatum HOM05D000003 ORTHO05D010201 1.2e-28 131.0 73 90.4
Potri.011G074150 Populus trichocarpa HOM05D000963 ORTHO05D011787 3.3e-26 122.9 58 98.3
Psat3g162200 Pisum sativum HOM05D000963 ORTHO05D004715 2.8e-25 119.8 77 77.9
Nitab4.5_0006632g0010 Nicotiana tabacum HOM05D000963 ORTHO05D010201 6.1e-25 118.6 70 80.0
Oeu015125.1 Olea europaea HOM05D000963 ORTHO05D010201 2.3e-24 116.7 77 76.6
arahy.Tifrunner.gnm1.ann1.WQN88D Arachis hypogaea HOM05D000963 ORTHO05D010201 6.8e-24 115.2 90 66.7
Oeu037158.1 Olea europaea HOM05D007843 ORTHO05D003639 2.9e-22 109.8 80 65.0
Nn031s41605 Nelumbo nucifera HOM05D000963 ORTHO05D010201 3.7e-22 109.4 52 100.0
Nn064s42223 Nelumbo nucifera HOM05D000963 ORTHO05D010201 3.7e-22 109.4 52 100.0
Nn212s45201 Nelumbo nucifera HOM05D000963 ORTHO05D010201 3.7e-22 109.4 52 100.0
Nn264s45945 Nelumbo nucifera HOM05D000963 ORTHO05D010201 3.7e-22 109.4 52 100.0
Nn403s46572 Nelumbo nucifera HOM05D000963 ORTHO05D010201 3.7e-22 109.4 52 100.0
Nn4g25378 Nelumbo nucifera HOM05D000963 ORTHO05D010201 3.7e-22 109.4 52 100.0
QL93p1338_0001 Quercus lobata HOM05D000963 ORTHO05D010201 6.4e-22 108.6 51 98.0
Nn6g32820 Nelumbo nucifera HOM05D000963 ORTHO05D010201 1.1e-21 107.8 52 98.1
Nitab4.5_0000924g0010 Nicotiana tabacum HOM05D000963 ORTHO05D010201 1.4e-21 107.5 194 44.8
Lsat_1_v5_gn_2_20500 Lactuca sativa HOM05D000963 ORTHO05D010201 3.2e-21 106.3 51 96.1
Lsat_1_v5_gn_2_98400 Lactuca sativa HOM05D000963 ORTHO05D010201 3.2e-21 106.3 51 96.1
Lsat_1_v5_gn_4_147701 Lactuca sativa HOM05D000963 ORTHO05D010201 3.2e-21 106.3 51 96.1
Lsat_1_v5_gn_4_147881 Lactuca sativa HOM05D000963 ORTHO05D010201 3.2e-21 106.3 51 96.1
Lsat_1_v5_gn_9_39260 Lactuca sativa HOM05D000963 ORTHO05D010201 3.2e-21 106.3 51 96.1
Lsat_1_v5_gn_4_147721 Lactuca sativa HOM05D000963 ORTHO05D010201 9.2e-21 104.8 52 96.2
Sc16g0004780 Simmondsia chinensis HOM05D000963 ORTHO05D010201 9.2e-21 104.8 73 75.3
Sc25g0002020 Simmondsia chinensis HOM05D000963 ORTHO05D004715 1.2e-20 104.4 49 100.0
unitig_91.g26528 Utricularia gibba HOM05D000963 ORTHO05D005131 1.6e-20 104.0 51 94.1
FAN28G1706 Fragaria x ananassa HOM05D000963 ORTHO05D010201 2.7e-20 103.2 51 92.2
CDE02G2524 Ceratophyllum demersum HOM05D000963 ORTHO05D010201 3.5e-20 102.8 51 94.1
Ca_23046_v3 Cicer arietinum L. HOM05D000963 ORTHO05D010658 6.0e-20 102.1 71 73.2
DCAR_031888 Daucus carota HOM05D000963 ORTHO05D010201 6.0e-20 102.1 51 90.2
PGSC0003DMG402008784 Solanum tuberosum HOM05D000963 ORTHO05D010201 7.8e-20 101.7 51 92.2
arahy.Tifrunner.gnm1.ann1.ZEDI37 Arachis hypogaea HOM05D005194 ORTHO05D003357 2.3e-19 100.1 47 100.0
arahy.Tifrunner.gnm1.ann1.XSZ5BB Arachis hypogaea HOM05D000963 ORTHO05D010201 3.9e-19 99.4 96 63.5
BraSC143t45649Z Brassica rapa HOM05D000963 ORTHO05D010201 6.6e-19 98.6 74 71.6
Gorai.001G160400 Gossypium raimondii HOM05D000963 ORTHO05D010201 1.5e-18 97.4 60 81.7
Gorai.008G055700 Gossypium raimondii HOM05D000963 ORTHO05D010201 5.6e-18 95.5 51 88.2
Sc04g0003590 Simmondsia chinensis HOM05D000963 ORTHO05D011787 9.5e-18 94.7 56 85.7
Gohir.D12G052550 Gossypium hirsutum HOM05D000963 ORTHO05D010201 1.6e-17 94.0 51 86.3
Gorai.005G170600 Gossypium raimondii HOM05D000963 ORTHO05D010201 1.8e-16 90.5 51 84.3
Nitab4.5_0000085g0180 Nicotiana tabacum HOM05D000963 ORTHO05D010201 8.9e-16 88.2 51 78.4
Migut.N02360 Erythranthe guttata HOM05D000963 ORTHO05D010201 1.2e-15 87.8 46 87.0
Peaxi162Scf00039g02315 Petunia axillaris HOM05D000963 ORTHO05D010201 1.2e-15 87.8 51 84.3
GSVIVG01004896001 Vitis vinifera HOM05D000963 ORTHO05D010201 2.0e-15 87.0 47 83.0
DCAR_031432 Daucus carota HOM05D000783 ORTHO05D000705 2.6e-15 86.7 42 97.6
arahy.Tifrunner.gnm1.ann1.QQ6I31 Arachis hypogaea HOM05D000963 ORTHO05D010201 3.4e-15 86.3 46 87.0
Peaxi162Scf00269g01412 Petunia axillaris HOM05D002694 ORTHO05D002927 4.9e-14 82.4 89 55.1
Nn6g35753 Nelumbo nucifera HOM05D000963 ORTHO05D010201 5.4e-13 79.0 36 100.0
VMungo0720G0452 Vigna mungo HOM05D000963 ORTHO05D010201 1.6e-12 77.4 39 94.9
Dinv32700 Davidia involucrata HOM05D000963 ORTHO05D010201 6.0e-12 75.5 36 94.4
Nitab4.5_0000172g0850 Nicotiana tabacum HOM05D000963 ORTHO05D010201 7.8e-12 75.1 58 67.2
Sc07g0006620 Simmondsia chinensis HOM05D011380 ORTHO05D019448 3.9e-11 72.8 35 100.0
Psat3g011600 Pisum sativum HOM05D000963 ORTHO05D010073 5.1e-11 72.4 52 71.2
arahy.Tifrunner.gnm1.ann1.SH46T5 Arachis hypogaea HOM05D000963 ORTHO05D005131 1.9e-10 70.5 38 92.1
CSS0038985 Camellia sinensis var. sinensis HOM05D000963 ORTHO05D010201 4.3e-10 69.3 38 84.2
arahy.Tifrunner.gnm1.ann1.U9SLDS Arachis hypogaea HOM05D000963 ORTHO05D010073 1.6e-09 67.4 34 94.1
Nn6g32824 Nelumbo nucifera HOM05D000963 ORTHO05D010201 2.8e-09 66.6 31 96.8
arahy.Tifrunner.gnm1.ann1.7T15I2 Arachis hypogaea HOM05D000445 ORTHO05D000314 1.5e-07 60.8 28 100.0
Rhsim11G0059100 Rhododendron simsii HOM05D000963 ORTHO05D010201 2.6e-07 60.1 55 60.0
Gohir.A10G068080 Gossypium hirsutum HOM05D000963 ORTHO05D010201 4.4e-07 59.3 37 81.1
arahy.Tifrunner.gnm1.ann1.9ZRI87 Arachis hypogaea HOM05D014741 ORTHO05D011787 5.8e-07 58.9 51 68.6
Nn029s41586 Nelumbo nucifera HOM05D000963 ORTHO05D010201 7.6e-07 58.5 27 100.0
arahy.Tifrunner.gnm1.ann1.LT6PXT Arachis hypogaea HOM05D000445 ORTHO05D031536 2.9e-06 56.6 30 93.3
DCAR_005991 Daucus carota HOM05D000061 ORTHO05D000915 6.4e-06 55.5 31 83.9


User provided reference genes

Program Settings