Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.A7V6P3 Arachis hypogaea HOM05D006624 ORTHO05D008209 2.4e-234 815.1 401 100.0
arahy.Tifrunner.gnm1.ann1.76B0S0 Arachis hypogaea HOM05D006624 ORTHO05D008209 1.1e-223 779.6 408 94.9
Glyma.11G041200 Glycine max HOM05D006624 ORTHO05D008209 1.7e-142 510.0 388 66.0
Medtr5g014010 Medicago truncatula HOM05D006624 ORTHO05D008209 1.6e-140 503.4 391 65.0
VMungo1215G2954 Vigna mungo HOM05D006624 ORTHO05D008209 5.0e-139 498.4 388 65.5
TPR.G21431 Trifolium pratense HOM05D006624 ORTHO05D008209 3.6e-137 492.3 398 64.8
Glyma.01G200900 Glycine max HOM05D006624 ORTHO05D008209 1.8e-136 490.0 388 64.4
Phvul.002G004700 Phaseolus vulgaris HOM05D006624 ORTHO05D008209 2.3e-136 489.6 369 65.6
Psat2g174640 Pisum sativum HOM05D006624 ORTHO05D008209 2.2e-134 483.0 363 66.4
Lj2g0021367 Lotus japonicus HOM05D006624 ORTHO05D008209 6.4e-134 481.5 384 63.8
Lalb_Chr16g0379211 Lupinus albus HOM05D006624 ORTHO05D008209 2.8e-129 466.1 368 64.1
QL12p007008 Quercus lobata HOM05D006624 ORTHO05D008209 9.5e-114 414.5 394 54.1
CiPaw.11G087800 Carya illinoinensis HOM05D006624 ORTHO05D008209 1.6e-113 413.7 389 54.0
Ciclev10031769m.g Citrus clementina HOM05D006624 ORTHO05D008209 4.9e-110 402.1 375 55.2
Potri.001G146500 Populus trichocarpa HOM05D006624 ORTHO05D008209 4.1e-109 399.1 391 52.4
Manes.17G019300 Manihot esculenta HOM05D006624 ORTHO05D008209 1.6e-105 387.1 390 52.6
COL.COLO4_17108 Corchorus olitorius HOM05D000087 ORTHO05D008209 2.1e-105 386.7 385 53.0
Dinv25186 Davidia involucrata HOM05D006624 ORTHO05D008209 2.1e-105 386.7 374 53.7
MD06G1040000 Malus domestica HOM05D006624 ORTHO05D008209 2.8e-105 386.3 364 53.0
Eucgr.E00310 Eucalyptus grandis HOM05D006624 ORTHO05D008209 3.6e-105 386.0 376 53.2
Gohir.A03G002600 Gossypium hirsutum HOM05D006624 ORTHO05D008209 6.2e-105 385.2 387 52.2
Sabra01G0115200 Salix brachista HOM05D006624 ORTHO05D008209 1.8e-104 383.6 374 52.1
Gorai.003G180000 Gossypium raimondii HOM05D006624 ORTHO05D008209 2.4e-104 383.3 376 52.4
Duzib068G0530 Durio zibethinus HOM05D006624 ORTHO05D008209 3.4e-103 379.4 348 55.2
TWI15G0738 Tripterygium wilfordii HOM05D006624 ORTHO05D008209 7.6e-103 378.3 362 53.0
QL12p007057 Quercus lobata HOM05D006624 ORTHO05D008209 2.9e-102 376.3 377 53.1
GSVIVG01013232001 Vitis vinifera HOM05D006624 ORTHO05D008209 4.9e-102 375.6 385 51.4
Atru.chr6.1770 Acer truncatum HOM05D006624 ORTHO05D008209 1.2e-100 370.9 393 51.4
Haze_08295 Corylus avellana HOM05D006624 ORTHO05D008209 1.2e-100 370.9 380 51.1
Prupe.5G046100 Prunus persica HOM05D006624 ORTHO05D008209 1.6e-100 370.5 365 50.7
PGR042G3682 Punica granatum HOM05D006624 ORTHO05D008209 1.6e-100 370.5 368 53.3
RcHm_v2.0_Chr7g0208351 Rosa chinensis HOM05D006624 ORTHO05D008209 2.1e-100 370.2 382 52.1
Rhsim07G0122500 Rhododendron simsii HOM05D006624 ORTHO05D008209 1.0e-99 367.9 358 53.4
TAR629G2579 Trochodendron aralioides HOM05D006624 ORTHO05D008209 3.9e-99 365.9 385 53.0
Actinidia31470 Actinidia chinensis HOM05D006624 ORTHO05D008209 8.7e-99 364.8 374 49.2
Thecc.03G233800 Theobroma cacao HOM05D006624 ORTHO05D008209 5.6e-98 362.1 388 52.1
CsaV3_3G049520 Cucumis sativus L. HOM05D006624 ORTHO05D008209 2.1e-97 360.1 365 52.3
Actinidia10881 Actinidia chinensis HOM05D006624 ORTHO05D008209 2.4e-96 356.7 372 49.5
BcaC06g31468 Brassica carinata HOM05D006624 ORTHO05D008209 4.0e-96 355.9 373 50.7
ClCG09G012360 Citrullus lanatus HOM05D006624 ORTHO05D008209 9.0e-96 354.8 370 51.1
CSS0000809 Camellia sinensis var. sinensis HOM05D006624 ORTHO05D008209 1.5e-95 354.0 365 51.0
CSS0049781 Camellia sinensis var. sinensis HOM05D006624 ORTHO05D008209 2.6e-95 353.2 365 51.0
Sed0020690 Sechium edule HOM05D006624 ORTHO05D008209 4.5e-95 352.4 377 47.7
THA.LOC104827742 Tarenaya hassleriana HOM05D006624 ORTHO05D008209 1.7e-94 350.5 359 51.5
BcaC06g34373 Brassica carinata HOM05D006624 ORTHO05D008209 8.4e-94 348.2 361 50.7
BolC7t43526H Brassica oleracea HOM05D006624 ORTHO05D008209 1.4e-93 347.4 361 50.4
A06p45890 Brassica napus HOM05D006624 ORTHO05D008209 1.9e-93 347.1 360 50.3
AT5G46560 Arabidopsis thaliana HOM05D006624 ORTHO05D008209 5.4e-93 345.5 367 51.5
AL8G11790 Arabidopsis lyrata HOM05D006624 ORTHO05D008209 7.1e-93 345.1 369 50.4
BraA06t27456Z Brassica rapa HOM05D006624 ORTHO05D008209 7.1e-93 345.1 360 50.0
C07p29750 Brassica napus HOM05D006624 ORTHO05D008209 2.1e-92 343.6 363 49.6
Ah.07g200030 Amaranthus hybridus HOM05D006624 ORTHO05D008209 3.5e-92 342.8 361 50.4
Aa31LG9G6360 Aethionema arabicum HOM05D006624 ORTHO05D008209 6.7e-91 338.6 365 48.8
FAN04G0639 Fragaria x ananassa HOM05D006624 ORTHO05D008209 2.5e-90 336.7 384 49.0
HanXRQChr08g0227961 Helianthus annuus HOM05D006624 ORTHO05D008209 2.5e-90 336.7 389 46.8
Gohir.D03G169701 Gossypium hirsutum HOM05D006624 ORTHO05D008209 4.3e-90 335.9 323 53.3
Aqoxy7G00644 Aquilegia oxysepala HOM05D006624 ORTHO05D008209 7.4e-90 335.1 374 49.5
EL10Ac5g12192 Beta vulgaris HOM05D006624 ORTHO05D008209 2.8e-89 333.2 343 51.0
vmacro14109 Vaccinium macrocarpon HOM05D006624 ORTHO05D008209 2.8e-89 333.2 455 43.5
MELO3C003374.2 Cucumis melo HOM05D006624 ORTHO05D008209 4.8e-89 332.4 381 48.3
Nitab4.5_0002055g0180 Nicotiana tabacum HOM05D006624 ORTHO05D008209 1.1e-88 331.3 375 47.2
Sc01g0007740 Simmondsia chinensis HOM05D006624 ORTHO05D008209 1.8e-88 330.5 382 46.3
MSTRG.12153 Avicennia marina HOM05D006624 ORTHO05D008209 3.1e-88 329.7 382 45.8
Nitab4.5_0004327g0020 Nicotiana tabacum HOM05D006624 ORTHO05D008209 6.9e-88 328.6 375 46.9
FvH4_5g21210 Fragaria vesca HOM05D006624 ORTHO05D008209 9.0e-88 328.2 384 48.2
Carub.0008s0136 Capsella rubella HOM05D006624 ORTHO05D008209 3.4e-87 326.2 350 51.1
AUR62007233 Chenopodium quinoa HOM05D006624 ORTHO05D008209 4.5e-87 325.9 368 46.5
AUR62018767 Chenopodium quinoa HOM05D006624 ORTHO05D008209 5.8e-87 325.5 343 49.0
FAN08G0242 Fragaria x ananassa HOM05D006624 ORTHO05D008209 7.6e-87 325.1 370 48.9
Hund14427 Selenicereus undatus HOM05D006624 ORTHO05D008209 3.8e-86 322.8 343 48.7
arahy.Tifrunner.gnm1.ann1.PE2WYP Arachis hypogaea HOM05D006624 ORTHO05D008209 8.4e-86 321.6 206 81.1
ECA233G2124 Erigeron canadensis HOM05D006624 ORTHO05D008209 1.4e-85 320.9 383 44.4
Migut.N01377 Erythranthe guttata HOM05D006624 ORTHO05D008209 1.4e-85 320.9 371 46.4
Solyc08g077250.4 Solanum lycopersicum HOM05D006624 ORTHO05D008209 1.9e-85 320.5 376 45.7
Sopen08g025830 Solanum pennellii HOM05D006624 ORTHO05D008209 9.3e-85 318.2 383 44.4
PGSC0003DMG400024215 Solanum tuberosum HOM05D006624 ORTHO05D008209 1.0e-83 314.7 373 45.3
CAN.G799.14 Capsicum annuum HOM05D006624 ORTHO05D008209 3.9e-83 312.8 360 46.9
Cc08_g02070 Coffea canephora HOM05D006624 ORTHO05D008209 1.3e-81 307.8 362 48.1
PSO339G2002 Papaver somniferum HOM05D006624 ORTHO05D008209 5.3e-80 302.4 374 47.3
PSO565G0001 Papaver somniferum HOM05D006624 ORTHO05D008209 2.6e-79 300.1 374 47.3
DCAR_031785 Daucus carota HOM05D006624 ORTHO05D008209 1.7e-78 297.4 365 46.8
FAN18G2886 Fragaria x ananassa HOM05D006624 ORTHO05D008209 1.4e-77 294.3 414 44.0
Ca_24634_v3 Cicer arietinum L. HOM05D006624 ORTHO05D008209 3.2e-77 293.1 188 77.7
SGA_v2.0_scaffold36G14316 Striga asiatica HOM05D006624 ORTHO05D008209 6.0e-76 288.9 388 42.3
CDE04G3153 Ceratophyllum demersum HOM05D006624 ORTHO05D008209 5.1e-75 285.8 341 45.2
Thhalv10000965m.g Eutrema salsugineum HOM05D006624 ORTHO05D008209 1.6e-73 280.8 316 47.5
Lsat_1_v5_gn_6_68241 Lactuca sativa HOM05D006624 ORTHO05D008209 1.6e-73 280.8 389 41.6
ATR1101G009 Amborella trichopoda HOM05D006624 ORTHO05D008209 3.1e-72 276.6 324 46.0
Cpa.g.sc6.412 Carica papaya HOM05D006624 ORTHO05D008209 1.6e-68 264.2 260 53.1
QL12p007029 Quercus lobata HOM05D006624 ORTHO05D008209 7.4e-66 255.4 267 47.6
Zm00001eb000170 Zea mays HOM05D006624 ORTHO05D008209 4.8e-65 252.7 366 38.8
MBI04_g31972_MAGBIO Magnolia biondii HOM05D006624 ORTHO05D008209 6.3e-65 252.3 435 40.0
SalBow6G4456 Salvia bowleyana HOM05D006624 ORTHO05D008209 7.7e-63 245.4 487 33.7
Lj2A246G27 Lonicera japonica HOM05D006624 ORTHO05D008209 2.6e-55 220.3 297 41.1
Peaxi162Scf00084g00925 Petunia axillaris HOM05D006624 ORTHO05D008209 1.1e-53 214.9 198 52.5
Gorai.001G276000 Gossypium raimondii HOM05D006624 ORTHO05D008209 1.4e-53 214.5 268 45.1
SEGI_35168 Sequoiadendron giganteum HOM05D006624 ORTHO05D008209 3.6e-52 209.9 308 40.3
FAN13G3188 Fragaria x ananassa HOM05D006624 ORTHO05D008209 1.7e-49 201.1 186 55.9
Hma1.2p1_3049F.1_g332130 Hydrangea macrophylla HOM05D006624 ORTHO05D008209 8.2e-49 198.7 316 41.8
Pp3c26_11390 Physcomitrium patens HOM05D006624 ORTHO05D008209 1.6e-47 194.5 329 34.3
Mapoly0037s0054 Marchantia polymorpha HOM05D006624 ORTHO05D008209 2.0e-47 194.1 332 34.6
CARHR175020 Cardamine hirsuta HOM05D006624 ORTHO05D008209 1.9e-45 187.6 240 43.3
Gorai.004G193000 Gossypium raimondii HOM05D006624 ORTHO05D008209 3.0e-43 180.3 245 40.4
arahy.Tifrunner.gnm1.ann1.HID3FF Arachis hypogaea HOM05D006624 ORTHO05D008209 5.7e-42 176.0 123 75.6
SpUn0632_0010 Schrenkiella parvula HOM05D006624 ORTHO05D008209 1.6e-39 167.9 241 41.1
Hma1.2p1_3049F.1_g332131 Hydrangea macrophylla HOM05D006624 ORTHO05D008209 3.8e-38 163.3 120 70.0
Gorai.013G102100 Gossypium raimondii HOM05D006624 ORTHO05D008209 1.7e-33 147.9 334 32.3
Hma1.2p1_0414F.1_g147760 Hydrangea macrophylla HOM05D006624 ORTHO05D008209 1.6e-31 141.4 135 51.9
CBR_g18557 Chara braunii HOM05D006624 ORTHO05D008209 5.5e-29 132.9 261 29.9
Duzib084G0908 Durio zibethinus HOM05D006624 ORTHO05D008209 8.3e-25 119.0 140 42.1
Peaxi162Scf00084g00918 Petunia axillaris HOM05D006624 ORTHO05D008209 1.1e-21 108.6 122 51.6
Gorai.004G213700 Gossypium raimondii HOM05D006624 ORTHO05D008209 2.1e-20 104.4 248 28.2
AagrBONN_evm.TU.Sc2ySwM_362.2673 Anthoceros agrestis HOM05D006624 ORTHO05D008209 2.8e-20 104.0 204 31.4
Gorai.001G079600 Gossypium raimondii HOM05D006624 ORTHO05D008209 3.7e-17 93.6 93 45.2
Os03g0100050 Oryza sativa ssp. japonica HOM05D006624 ORTHO05D008209 9.2e-16 89.0 122 41.0
Gohir.D11G288800 Gossypium hirsutum HOM05D000724 ORTHO05D011687 7.8e-15 85.9 85 48.2
Gohir.D08G202450 Gossypium hirsutum HOM05D006624 ORTHO05D008209 1.9e-13 81.3 67 49.3
Gohir.D07G137300 Gossypium hirsutum HOM05D006624 ORTHO05D008209 5.6e-13 79.7 69 47.8
Gorai.007G312600 Gossypium raimondii HOM05D000724 ORTHO05D011687 7.3e-13 79.3 270 24.8
CBR_g30426 Chara braunii HOM05D006624 ORTHO05D008209 4.6e-07 60.1 46 52.2


User provided reference genes

Program Settings