Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.A7P7U5 Arachis hypogaea HOM05D004535 ORTHO05D005341 2.5e-60 235.3 127 100.0
arahy.Tifrunner.gnm1.ann1.DDNH16 Arachis hypogaea HOM05D004535 ORTHO05D005341 3.8e-40 168.3 93 95.7
arahy.Tifrunner.gnm1.ann1.HJC4WF Arachis hypogaea HOM05D004535 ORTHO05D005341 3.8e-40 168.3 93 95.7
Lalb_Chr20g0115261 Lupinus albus HOM05D004535 ORTHO05D005341 9.6e-36 153.7 93 87.1
Lj6g0015552 Lotus japonicus HOM05D004535 ORTHO05D005341 1.3e-35 153.3 93 87.1
Lalb_Chr18g0050431 Lupinus albus HOM05D004535 ORTHO05D005341 1.8e-34 149.4 93 86.0
Glyma.18G071500 Glycine max HOM05D004535 ORTHO05D005341 2.4e-34 149.1 93 86.0
Ca_14867_v3 Cicer arietinum L. HOM05D004535 ORTHO05D005341 3.1e-34 148.7 115 73.9
Glyma.08G336400 Glycine max HOM05D004535 ORTHO05D005341 3.1e-34 148.7 93 86.0
Medtr3g461520 Medicago truncatula HOM05D004535 ORTHO05D005341 3.1e-34 148.7 93 84.9
arahy.Tifrunner.gnm1.ann1.6S2B7N Arachis hypogaea HOM05D012221 ORTHO05D005341 4.0e-34 148.3 130 69.2
Psat5g164120 Pisum sativum HOM05D004535 ORTHO05D005341 9.0e-34 147.1 93 84.9
TPR.G14720 Trifolium pratense HOM05D004535 ORTHO05D005341 2.0e-33 146.0 93 83.9
Medtr3g461500 Medicago truncatula HOM05D004535 ORTHO05D005341 2.2e-32 142.5 93 81.7
VMungo0540G2510 Vigna mungo HOM05D004535 ORTHO05D005341 1.9e-31 139.4 93 81.7
Phvul.006G061700 Phaseolus vulgaris HOM05D004535 ORTHO05D005341 7.9e-30 134.0 93 79.6
Sabra11G0138700 Salix brachista HOM05D004535 ORTHO05D005341 1.3e-29 133.3 93 78.5
Eucgr.F02001 Eucalyptus grandis HOM05D004535 ORTHO05D005341 8.7e-29 130.6 106 69.8
Dinv19653 Davidia involucrata HOM05D004535 ORTHO05D005341 1.1e-28 130.2 131 59.5
Lj1C898T24 Lonicera japonica HOM05D004535 ORTHO05D005341 1.1e-28 130.2 116 66.4
MD00G1206400 Malus domestica HOM05D004535 ORTHO05D005341 3.3e-28 128.6 93 75.3
MD03G1040600 Malus domestica HOM05D004535 ORTHO05D005341 3.3e-28 128.6 93 75.3
Prupe.6G032900 Prunus persica HOM05D004535 ORTHO05D005341 3.3e-28 128.6 106 68.9
FvH4_3g41830 Fragaria vesca HOM05D004535 ORTHO05D005341 7.4e-28 127.5 106 68.9
FAN11G1653 Fragaria x ananassa HOM05D004535 ORTHO05D005341 7.4e-28 127.5 106 68.9
FAN16G2454 Fragaria x ananassa HOM05D004535 ORTHO05D005341 7.4e-28 127.5 106 68.9
MD11G1042000 Malus domestica HOM05D004535 ORTHO05D005341 7.4e-28 127.5 93 74.2
FAN25G2892 Fragaria x ananassa HOM05D004535 ORTHO05D005341 9.6e-28 127.1 106 68.9
Potri.001G470600 Populus trichocarpa HOM05D004535 ORTHO05D005341 9.6e-28 127.1 93 75.3
Cpa.g.sc12.80 Carica papaya HOM05D004535 ORTHO05D005341 1.3e-27 126.7 93 73.1
RcHm_v2.0_Chr5g0075021 Rosa chinensis HOM05D004535 ORTHO05D005341 2.8e-27 125.6 106 68.9
TAR627G0331 Trochodendron aralioides HOM05D004535 ORTHO05D005341 2.8e-27 125.6 93 75.3
Atru.chr2.3782 Acer truncatum HOM05D004535 ORTHO05D005341 3.7e-27 125.2 131 58.0
Hma1.2p1_0193F.1_g084240 Hydrangea macrophylla HOM05D004535 ORTHO05D005341 3.7e-27 125.2 93 73.1
Nn1g08312 Nelumbo nucifera HOM05D004535 ORTHO05D005341 3.7e-27 125.2 93 72.0
Ciclev10007234m.g Citrus clementina HOM05D004535 ORTHO05D005341 8.2e-27 124.0 134 56.0
CANSAT11G1644 Cannabis sativa HOM05D004535 ORTHO05D005341 1.1e-26 123.6 93 74.2
QL08p000781 Quercus lobata HOM05D004535 ORTHO05D005341 1.1e-26 123.6 95 74.7
FAN21G2952 Fragaria x ananassa HOM05D004535 ORTHO05D005341 2.4e-26 122.5 106 68.9
Cc05_g15580 Coffea canephora HOM05D004535 ORTHO05D005341 4.0e-26 121.7 93 73.1
CAN.G623.63 Capsicum annuum HOM05D004535 ORTHO05D005341 6.9e-26 120.9 93 73.1
DCAR_013765 Daucus carota HOM05D004535 ORTHO05D005341 6.9e-26 120.9 119 62.2
Actinidia03667 Actinidia chinensis HOM05D004535 ORTHO05D005341 9.0e-26 120.6 93 74.2
Peaxi162Scf00232g00530 Petunia axillaris HOM05D004535 ORTHO05D005341 1.2e-25 120.2 93 73.1
Sopen07g034220 Solanum pennellii HOM05D004535 ORTHO05D005341 1.5e-25 119.8 93 72.0
Haze_09904 Corylus avellana HOM05D004535 ORTHO05D005341 2.0e-25 119.4 101 66.3
TWI38G2299 Tripterygium wilfordii HOM05D004535 ORTHO05D005341 2.0e-25 119.4 93 72.0
QL08p000755 Quercus lobata HOM05D004535 ORTHO05D005341 2.6e-25 119.0 128 58.6
Solyc07g066030.4 Solanum lycopersicum HOM05D004535 ORTHO05D005341 3.4e-25 118.6 93 72.0
Lsat_1_v5_gn_9_89621 Lactuca sativa HOM05D004535 ORTHO05D005341 4.5e-25 118.2 93 72.0
Nitab4.5_0001303g0050 Nicotiana tabacum HOM05D004535 ORTHO05D005341 5.8e-25 117.9 93 71.0
Hund22978 Selenicereus undatus HOM05D004535 ORTHO05D005341 5.8e-25 117.9 89 75.3
MSTRG.15824 Avicennia marina HOM05D004535 ORTHO05D005341 7.6e-25 117.5 110 63.6
Haze_09903 Corylus avellana HOM05D004535 ORTHO05D005341 7.6e-25 117.5 95 70.5
CiPaw.11G209600 Carya illinoinensis HOM05D004535 ORTHO05D005341 1.0e-24 117.1 95 71.6
HanXRQChr03g0079281 Helianthus annuus HOM05D004535 ORTHO05D005341 1.0e-24 117.1 123 58.5
Oeu013013.2 Olea europaea HOM05D004535 ORTHO05D005341 1.3e-24 116.7 96 71.9
ECA240G2049 Erigeron canadensis HOM05D004535 ORTHO05D005341 1.7e-24 116.3 93 68.8
Nitab4.5_0000152g0130 Nicotiana tabacum HOM05D004535 ORTHO05D005341 1.7e-24 116.3 93 69.9
Rhsim04G0008600 Rhododendron simsii HOM05D004535 ORTHO05D005341 1.7e-24 116.3 93 72.0
SalBow8G3417 Salvia bowleyana HOM05D004535 ORTHO05D005341 3.8e-24 115.2 93 72.0
Duzib213G0320 Durio zibethinus HOM05D004535 ORTHO05D005341 6.5e-24 114.4 93 69.9
PGR083G0052 Punica granatum HOM05D004535 ORTHO05D005341 6.5e-24 114.4 91 70.3
Thecc.07G003100 Theobroma cacao HOM05D004535 ORTHO05D005341 6.5e-24 114.4 93 68.8
ClCG10G004180 Citrullus lanatus HOM05D004535 ORTHO05D005341 8.4e-24 114.0 106 65.1
Sed0018073 Sechium edule HOM05D004535 ORTHO05D005341 1.1e-23 113.6 107 62.6
Migut.M01591 Erythranthe guttata HOM05D004535 ORTHO05D005341 1.4e-23 113.2 93 66.7
CiPaw.12G142100 Carya illinoinensis HOM05D004535 ORTHO05D005341 2.5e-23 112.5 93 66.7
CsaV3_3G003990 Cucumis sativus L. HOM05D004535 ORTHO05D005341 2.5e-23 112.5 106 64.2
Aqoxy4G02281 Aquilegia oxysepala HOM05D004535 ORTHO05D005341 3.2e-23 112.1 124 53.2
Manes.01G005500 Manihot esculenta HOM05D004535 ORTHO05D005341 3.2e-23 112.1 93 69.9
GSVIVG01014769001 Vitis vinifera HOM05D004535 ORTHO05D005341 3.2e-23 112.1 93 71.0
AUR62035634 Chenopodium quinoa HOM05D004535 ORTHO05D005341 5.5e-23 111.3 93 66.7
THA.LOC104822705 Tarenaya hassleriana HOM05D004535 ORTHO05D005341 9.3e-23 110.5 93 66.7
arahy.Tifrunner.gnm1.ann1.EHT35G Arachis hypogaea HOM05D004535 ORTHO05D005341 1.2e-22 110.2 106 66.0
MELO3C014086.2 Cucumis melo HOM05D004535 ORTHO05D005341 1.6e-22 109.8 93 67.7
CSS0018371 Camellia sinensis var. sinensis HOM05D004535 ORTHO05D005341 2.1e-22 109.4 94 66.0
CARHR087940 Cardamine hirsuta HOM05D004535 ORTHO05D005341 2.1e-22 109.4 123 57.7
Thhalv10019881m.g Eutrema salsugineum HOM05D004535 ORTHO05D005341 2.1e-22 109.4 123 57.7
unitig_699.g19598 Utricularia gibba HOM05D004535 ORTHO05D005341 2.7e-22 109.0 107 62.6
PSO210G5731 Papaver somniferum HOM05D004535 ORTHO05D005341 3.5e-22 108.6 93 63.4
AL3G25150 Arabidopsis lyrata HOM05D004535 ORTHO05D005341 4.6e-22 108.2 123 56.1
Carub.0003s1271 Capsella rubella HOM05D004535 ORTHO05D005341 6.0e-22 107.8 123 57.7
SalBow8G2487 Salvia bowleyana HOM05D004535 ORTHO05D005341 6.0e-22 107.8 93 67.7
AUR62017172 Chenopodium quinoa HOM05D004535 ORTHO05D005341 7.9e-22 107.5 93 64.5
Aa31LG8G550 Aethionema arabicum HOM05D004535 ORTHO05D005341 1.0e-21 107.1 115 58.3
AT3G13330 Arabidopsis thaliana HOM05D004535 ORTHO05D005341 1.0e-21 107.1 123 55.3
vmacro09603 Vaccinium macrocarpon HOM05D004535 ORTHO05D005341 1.3e-21 106.7 96 67.7
BcaB04g18753 Brassica carinata HOM05D004535 ORTHO05D005341 1.8e-21 106.3 106 61.3
HanXRQChr13g0409231 Helianthus annuus HOM05D004535 ORTHO05D005341 1.8e-21 106.3 93 65.6
EL10Ac4g07499 Beta vulgaris HOM05D004535 ORTHO05D005341 2.3e-21 105.9 128 54.7
Sc20g0000040 Simmondsia chinensis HOM05D004535 ORTHO05D005341 3.0e-21 105.5 107 56.1
MBI15_g37116_MAGBIO Magnolia biondii HOM05D004535 ORTHO05D005341 3.9e-21 105.1 93 63.4
BcaC01g03999 Brassica carinata HOM05D004535 ORTHO05D005341 8.7e-21 104.0 106 60.4
A03p38140 Brassica napus HOM05D004535 ORTHO05D005341 8.7e-21 104.0 106 60.4
C03p46300 Brassica napus HOM05D004535 ORTHO05D005341 8.7e-21 104.0 106 60.4
BolC3t16899H Brassica oleracea HOM05D004535 ORTHO05D005341 8.7e-21 104.0 106 60.4
BraA03t12967Z Brassica rapa HOM05D004535 ORTHO05D005341 8.7e-21 104.0 106 60.4
Gohir.A04G001901 Gossypium hirsutum HOM05D004535 ORTHO05D005341 1.9e-20 102.8 93 63.4
Gorai.009G454100 Gossypium raimondii HOM05D004535 ORTHO05D005341 1.9e-20 102.8 93 63.4
Gohir.D05G387450 Gossypium hirsutum HOM05D004535 ORTHO05D005341 2.5e-20 102.4 93 63.4
Sp3g11530 Schrenkiella parvula HOM05D004535 ORTHO05D005341 3.3e-20 102.1 116 58.6
CDE05G3236 Ceratophyllum demersum HOM05D004535 ORTHO05D005341 1.1e-18 97.1 93 58.1
ATR0751G071 Amborella trichopoda HOM05D004535 ORTHO05D005341 1.0e-16 90.5 132 47.7
HPP92_018915 Vanilla planifolia HOM05D004535 ORTHO05D005341 2.1e-14 82.8 83 55.4
Zm00001eb281130 Zea mays HOM05D004535 ORTHO05D005341 7.9e-14 80.9 89 55.1
arahy.Tifrunner.gnm1.ann1.39Z329 Arachis hypogaea HOM05D002272 ORTHO05D005405 2.2e-11 72.8 39 94.9
arahy.Tifrunner.gnm1.ann1.HQ6FCP Arachis hypogaea HOM05D004535 ORTHO05D005341 1.1e-10 70.5 125 44.8
arahy.Tifrunner.gnm1.ann1.QBA8JR Arachis hypogaea HOM05D004535 ORTHO05D005341 1.8e-10 69.7 39 92.3
arahy.Tifrunner.gnm1.ann1.TGLR9V Arachis hypogaea HOM05D004535 ORTHO05D005341 2.4e-10 69.3 39 92.3
Ah.06g180940 Amaranthus hybridus HOM05D004535 ORTHO05D005341 5.9e-09 64.7 61 63.9
SEGI_38328 Sequoiadendron giganteum HOM05D004535 ORTHO05D005341 1.4e-07 60.1 108 39.8


User provided reference genes

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