Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.A7IBVM Arachis hypogaea HOM05D007199 ORTHO05D007257 7.6e-127 457.6 311 100.0
arahy.Tifrunner.gnm1.ann1.P1IKWH Arachis hypogaea HOM05D007199 ORTHO05D007257 1.6e-100 370.2 313 86.6
VMungo0331G0932 Vigna mungo HOM05D007199 ORTHO05D007257 4.4e-50 202.6 319 44.2
Glyma.16G021400 Glycine max HOM05D007199 ORTHO05D007257 1.3e-49 201.1 331 43.8
Glyma.07G052500 Glycine max HOM05D007199 ORTHO05D007257 2.2e-49 200.3 322 44.1
Phvul.010G116850 Phaseolus vulgaris HOM05D007199 ORTHO05D007257 3.7e-49 199.5 319 43.3
Phvul.010G116900 Phaseolus vulgaris HOM05D007199 ORTHO05D007257 3.7e-49 199.5 319 43.3
Lj3g0002992 Lotus japonicus HOM05D007199 ORTHO05D007257 3.6e-44 183.0 296 48.3
Medtr8g027100 Medicago truncatula HOM05D007199 ORTHO05D007257 8.1e-44 181.8 312 41.3
Lalb_Chr10g0100741 Lupinus albus HOM05D007199 ORTHO05D007257 1.4e-40 171.0 325 40.0
TPR.G15900 Trifolium pratense HOM05D007199 ORTHO05D007257 4.1e-40 169.5 296 42.6
Lalb_Chr15g0076391 Lupinus albus HOM05D007199 ORTHO05D007257 5.4e-40 169.1 324 38.6
Psat4g216200 Pisum sativum HOM05D007199 ORTHO05D007257 7.1e-40 168.7 320 40.9
Ca_23498_v3 Cicer arietinum L. HOM05D007199 ORTHO05D007257 1.6e-36 157.5 285 41.1
CiPaw.02G043300 Carya illinoinensis HOM05D007199 ORTHO05D007257 7.6e-34 148.7 286 37.4
Haze_15700 Corylus avellana HOM05D007199 ORTHO05D007257 2.4e-32 143.7 318 34.3
QL08p046296 Quercus lobata HOM05D007199 ORTHO05D007257 7.8e-31 138.7 322 34.5
CiPaw.01G079500 Carya illinoinensis HOM05D007199 ORTHO05D007257 1.1e-27 128.3 327 33.9
Ciclev10024292m.g Citrus clementina HOM05D007199 ORTHO05D007257 1.8e-27 127.5 310 32.6
Potri.014G102600 Populus trichocarpa HOM05D007199 ORTHO05D007257 1.2e-26 124.8 308 33.4
arahy.Tifrunner.gnm1.ann1.WJU08E Arachis hypogaea HOM05D007199 ORTHO05D007257 3.8e-25 119.8 279 35.5
Manes.05G019000 Manihot esculenta HOM05D007199 ORTHO05D007257 3.8e-25 119.8 304 32.9
Prupe.2G194000 Prunus persica HOM05D007199 ORTHO05D007257 3.2e-24 116.7 286 32.5
arahy.Tifrunner.gnm1.ann1.GEK5Z0 Arachis hypogaea HOM05D007199 ORTHO05D007257 4.2e-24 116.3 282 35.1
TWI14G0585 Tripterygium wilfordii HOM05D007199 ORTHO05D007257 7.1e-24 115.5 303 32.0
Duzib138G1694 Durio zibethinus HOM05D007199 ORTHO05D007257 1.2e-23 114.8 327 31.8
Thecc.01G336800 Theobroma cacao HOM05D007199 ORTHO05D007257 2.1e-23 114.0 322 31.1
TWI23G0381 Tripterygium wilfordii HOM05D007199 ORTHO05D007257 2.7e-23 113.6 302 32.1
Atru.chr5.734 Acer truncatum HOM05D007199 ORTHO05D007257 3.5e-23 113.2 288 30.9
Cpa.g.sc144.10 Carica papaya HOM05D007199 ORTHO05D007257 7.9e-23 112.1 313 30.0
Potri.002G175300 Populus trichocarpa HOM05D007199 ORTHO05D007257 7.9e-23 112.1 301 32.6
FAN10G2445 Fragaria x ananassa HOM05D007199 ORTHO05D007257 2.3e-22 110.5 284 31.0
FAN10G3440 Fragaria x ananassa HOM05D007199 ORTHO05D007257 2.3e-22 110.5 284 31.0
FAN03G0194 Fragaria x ananassa HOM05D007199 ORTHO05D007257 3.0e-22 110.2 284 31.0
MD07G1155200 Malus domestica HOM05D007199 ORTHO05D007257 3.0e-22 110.2 284 31.7
Dinv32625 Davidia involucrata HOM05D007199 ORTHO05D007257 1.5e-21 107.8 305 30.5
FAN06G3172 Fragaria x ananassa HOM05D007199 ORTHO05D007257 1.5e-21 107.8 284 31.0
GSVIVG01027402001 Vitis vinifera HOM05D007199 ORTHO05D007257 1.5e-21 107.8 296 32.4
FvH4_7g17280 Fragaria vesca HOM05D007199 ORTHO05D007257 1.9e-21 107.5 284 31.0
FAN01G2057 Fragaria x ananassa HOM05D007199 ORTHO05D007257 1.9e-21 107.5 284 30.3
RcHm_v2.0_Chr1g0360641 Rosa chinensis HOM05D007199 ORTHO05D007257 1.9e-21 107.5 287 32.1
Gohir.D11G103900 Gossypium hirsutum HOM05D007199 ORTHO05D007257 3.3e-21 106.7 289 31.1
MELO3C022248.2 Cucumis melo HOM05D007199 ORTHO05D007257 7.3e-21 105.5 293 31.7
Gohir.A11G099400 Gossypium hirsutum HOM05D007199 ORTHO05D007257 1.3e-20 104.8 289 30.8
Gohir.A08G124000 Gossypium hirsutum HOM05D007199 ORTHO05D007257 2.8e-20 103.6 286 31.1
Gorai.007G111200 Gossypium raimondii HOM05D007199 ORTHO05D007257 2.8e-20 103.6 289 30.4
MD00G1035800 Malus domestica HOM05D007199 ORTHO05D007257 2.8e-20 103.6 293 31.4
CsaV3_6G008960 Cucumis sativus L. HOM05D007199 ORTHO05D007257 6.2e-20 102.4 293 31.7
Hma1.2p1_0309F.1_g120450 Hydrangea macrophylla HOM05D007199 ORTHO05D007257 1.8e-19 100.9 315 30.8
Gorai.004G150000 Gossypium raimondii HOM05D007199 ORTHO05D007257 2.4e-19 100.5 286 30.4
Gohir.D08G145100 Gossypium hirsutum HOM05D007199 ORTHO05D007257 3.1e-19 100.1 286 30.4
Duzib133G0933 Durio zibethinus HOM05D007199 ORTHO05D007257 5.3e-19 99.4 347 29.4
Manes.01G254801 Manihot esculenta HOM05D007199 ORTHO05D007257 7.6e-18 95.5 312 29.5
Dinv34240 Davidia involucrata HOM05D007199 ORTHO05D007257 1.1e-16 91.7 314 30.6
Sopen10g005110 Solanum pennellii HOM05D007199 ORTHO05D007257 1.4e-16 91.3 314 28.0
Solyc10g009320.3 Solanum lycopersicum HOM05D007199 ORTHO05D007257 2.4e-16 90.5 326 28.2
Nitab4.5_0002638g0020 Nicotiana tabacum HOM05D007199 ORTHO05D007257 1.2e-15 88.2 287 27.5
TAR629G0242 Trochodendron aralioides HOM05D007199 ORTHO05D007257 1.6e-15 87.8 307 27.0
Nn1g00376 Nelumbo nucifera HOM05D007199 ORTHO05D007257 4.6e-15 86.3 297 28.3
Gohir.A12G114200 Gossypium hirsutum HOM05D007199 ORTHO05D007257 1.3e-14 84.7 287 27.9
Sopen01g040020 Solanum pennellii HOM05D007199 ORTHO05D007257 1.3e-14 84.7 298 29.2
PGSC0003DMG400005529 Solanum tuberosum HOM05D007199 ORTHO05D007257 1.3e-14 84.7 300 28.7
Sed0010537 Sechium edule HOM05D007199 ORTHO05D007257 3.0e-14 83.6 306 28.4
ClCG06G002790 Citrullus lanatus HOM05D007199 ORTHO05D007257 3.9e-14 83.2 258 30.6
Eucgr.E00024 Eucalyptus grandis HOM05D007199 ORTHO05D007257 5.1e-14 82.8 295 29.2
Solyc01g096260.4 Solanum lycopersicum HOM05D007199 ORTHO05D007257 6.7e-14 82.4 295 28.8
PSO782G1188 Papaver somniferum HOM05D007199 ORTHO05D007257 8.7e-14 82.0 303 27.7
PGSC0003DMG400000126 Solanum tuberosum HOM05D007199 ORTHO05D007257 1.9e-13 80.9 292 30.1
CSS0043385 Camellia sinensis var. sinensis HOM05D007199 ORTHO05D007257 2.8e-12 77.0 291 37.1
Nitab4.5_0014168g0010 Nicotiana tabacum HOM05D007199 ORTHO05D007257 2.8e-12 77.0 277 26.4
Rhsim01G0176600 Rhododendron simsii HOM05D007199 ORTHO05D007257 1.4e-11 74.7 319 27.3
Sabra14G0075600 Salix brachista HOM05D007199 ORTHO05D007257 1.2e-10 71.6 310 26.5
Lj9C602T4 Lonicera japonica HOM05D007199 ORTHO05D007257 1.5e-10 71.2 274 25.9
MSTRG.17369 Avicennia marina HOM05D007199 ORTHO05D007257 2.0e-10 70.9 297 26.3
Actinidia25657 Actinidia chinensis HOM05D007199 ORTHO05D007257 2.6e-10 70.5 85 51.8
COL.COLO4_06259 Corchorus olitorius HOM05D007199 ORTHO05D007257 2.6e-10 70.5 86 46.5
CANSAT56G1498 Cannabis sativa HOM05D007199 ORTHO05D007257 4.5e-10 69.7 284 25.7
THA.LOC104802086 Tarenaya hassleriana HOM05D007199 ORTHO05D007257 7.6e-10 68.9 293 26.6
Peaxi162Scf00087g00199 Petunia axillaris HOM05D007199 ORTHO05D007257 1.0e-09 68.6 292 25.7
Lsat_1_v5_gn_4_32721 Lactuca sativa HOM05D007199 ORTHO05D007257 1.4e-08 64.7 296 25.7
ECA236G3069 Erigeron canadensis HOM05D007199 ORTHO05D007257 2.5e-08 63.9 305 25.9
Thhalv10001576m.g Eutrema salsugineum HOM05D012720 ORTHO05D007257 2.5e-08 63.9 294 24.1
THA.LOC104817388 Tarenaya hassleriana HOM05D007199 ORTHO05D007257 2.5e-08 63.9 328 25.9
Aa31LG1G28040 Aethionema arabicum HOM05D007199 ORTHO05D007257 4.2e-08 63.2 313 24.9
CARHR141980 Cardamine hirsuta HOM05D012720 ORTHO05D007257 7.1e-08 62.4 321 25.9
Actinidia28100 Actinidia chinensis HOM05D007199 ORTHO05D007257 1.6e-07 61.2 299 31.1
TAR375G0146 Trochodendron aralioides HOM05D007199 ORTHO05D007257 2.1e-07 60.8 298 25.5
MBI12_g13712_MAGBIO Magnolia biondii HOM05D007199 ORTHO05D007257 7.9e-07 58.9 138 30.4
AL4G46070 Arabidopsis lyrata HOM05D012720 ORTHO05D007257 1.0e-06 58.5 307 23.5
HanXRQChr04g0120361 Helianthus annuus HOM05D007199 ORTHO05D007257 1.3e-06 58.2 293 28.0
AUR62008640 Chenopodium quinoa HOM05D021513 ORTHO05D007257 3.0e-06 57.0 105 41.0
DCAR_002988 Daucus carota HOM05D007199 ORTHO05D007257 8.7e-06 55.5 98 38.8


User provided reference genes

Program Settings