Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.A65ZGP Arachis hypogaea HOM05D006594 ORTHO05D008383 1.0e-111 406.8 203 100.0
LjContig00238g0014067 Lotus japonicus HOM05D006594 ORTHO05D008383 9.9e-43 177.6 179 56.4
Ca_10784_v3 Cicer arietinum L. HOM05D006594 ORTHO05D008383 8.4e-42 174.5 183 57.4
Medtr1g100767 Medicago truncatula HOM05D006594 ORTHO05D008383 7.9e-40 167.9 180 55.6
Glyma.20G156900 Glycine max HOM05D006594 ORTHO05D008383 1.8e-39 166.8 180 53.9
Lalb_Chr06g0161051 Lupinus albus HOM05D006594 ORTHO05D008383 1.8e-39 166.8 186 53.2
TPR.G14337 Trifolium pratense HOM05D006594 ORTHO05D008383 3.0e-39 166.0 180 55.0
Glyma.10G237700 Glycine max HOM05D006594 ORTHO05D008383 3.9e-39 165.6 180 53.3
arahy.Tifrunner.gnm1.ann1.MGJ2V1 Arachis hypogaea HOM05D006594 ORTHO05D008383 1.9e-38 163.3 132 68.2
arahy.Tifrunner.gnm1.ann1.GIF0V2 Arachis hypogaea HOM05D006594 ORTHO05D008383 5.6e-38 161.8 105 78.1
Psat6g200680 Pisum sativum HOM05D006594 ORTHO05D008383 7.4e-38 161.4 179 55.3
Phvul.007G067900 Phaseolus vulgaris HOM05D006594 ORTHO05D008383 1.3e-37 160.6 179 52.0
QL09p014600 Quercus lobata HOM05D006594 ORTHO05D008383 7.1e-33 144.8 178 46.6
Cfa008301 Carpinus fangiana HOM05D006594 ORTHO05D008383 1.8e-31 140.2 179 44.7
Prupe.2G292200 Prunus persica HOM05D006594 ORTHO05D008383 5.1e-31 138.7 179 47.5
MD07G1266600 Malus domestica HOM05D006594 ORTHO05D008383 1.9e-30 136.7 179 46.9
CiPaw.03G104400 Carya illinoinensis HOM05D006594 ORTHO05D008383 3.3e-30 136.0 179 45.8
TAR374G1009 Trochodendron aralioides HOM05D006594 ORTHO05D008383 3.1e-28 129.4 209 39.7
Ciclev10004900m.g Citrus clementina HOM05D006594 ORTHO05D008383 4.1e-28 129.0 211 39.8
CSS0002088 Camellia sinensis var. sinensis HOM05D006594 ORTHO05D008383 6.9e-28 128.3 180 43.9
CSS0024482 Camellia sinensis var. sinensis HOM05D006594 ORTHO05D008383 3.4e-27 125.9 180 43.3
Manes.14G027600 Manihot esculenta HOM05D006594 ORTHO05D008383 3.4e-27 125.9 181 42.5
RcHm_v2.0_Chr1g0376971 Rosa chinensis HOM05D006594 ORTHO05D008383 3.4e-27 125.9 166 45.2
Potri.015G140900 Populus trichocarpa HOM05D006594 ORTHO05D008383 4.5e-27 125.6 180 43.9
FAN06G4553 Fragaria x ananassa HOM05D006594 ORTHO05D008383 1.7e-26 123.6 166 44.6
PSO782G0556 Papaver somniferum HOM05D006594 ORTHO05D008383 1.7e-26 123.6 184 41.8
FAN06G0009 Fragaria x ananassa HOM05D006594 ORTHO05D008383 2.2e-26 123.2 166 45.2
Duzib205G1849 Durio zibethinus HOM05D006594 ORTHO05D008383 2.9e-26 122.9 177 42.9
CsaV3_3G016960 Cucumis sativus L. HOM05D006594 ORTHO05D008383 3.8e-26 122.5 179 40.8
Lsat_1_v5_gn_0_29900 Lactuca sativa HOM05D006594 ORTHO05D008383 5.0e-26 122.1 181 39.2
FAN10G1161 Fragaria x ananassa HOM05D006594 ORTHO05D008383 6.5e-26 121.7 166 44.6
Sabra15G0151500 Salix brachista HOM05D006594 ORTHO05D008383 8.4e-26 121.3 176 42.6
COL.COLO4_14285 Corchorus olitorius HOM05D006594 ORTHO05D008383 3.2e-25 119.4 177 41.2
ClCG05G007930 Citrullus lanatus HOM05D006594 ORTHO05D008383 4.2e-25 119.0 176 40.9
Hma1.2p1_1323F.1_g275590 Hydrangea macrophylla HOM05D006594 ORTHO05D008383 7.2e-25 118.2 163 42.9
MELO3C006892.2 Cucumis melo HOM05D006594 ORTHO05D008383 9.3e-25 117.9 179 40.2
Nitab4.5_0001508g0080 Nicotiana tabacum HOM05D006594 ORTHO05D008383 9.3e-25 117.9 198 39.9
CDE11G0822 Ceratophyllum demersum HOM05D006594 ORTHO05D008383 1.2e-24 117.5 179 39.7
Eucgr.K00239 Eucalyptus grandis HOM05D006594 ORTHO05D008383 1.6e-24 117.1 179 39.7
BcaC04g20605 Brassica carinata HOM05D006594 ORTHO05D008383 2.1e-24 116.7 208 38.5
C09p41600 Brassica napus HOM05D006594 ORTHO05D008383 2.1e-24 116.7 208 38.5
BolC9t57044H Brassica oleracea HOM05D006594 ORTHO05D008383 2.1e-24 116.7 208 38.5
DCAR_009355 Daucus carota HOM05D006594 ORTHO05D008383 2.7e-24 116.3 179 40.2
Oeu022583.1 Olea europaea HOM05D006594 ORTHO05D008383 3.5e-24 115.9 179 41.3
Sc19g0001600 Simmondsia chinensis HOM05D006594 ORTHO05D008383 3.5e-24 115.9 180 40.0
BcaB08g35566 Brassica carinata HOM05D006594 ORTHO05D008383 4.6e-24 115.5 208 38.0
FAN01G0792 Fragaria x ananassa HOM05D006594 ORTHO05D008383 4.6e-24 115.5 162 43.8
Aa31LG3G8560 Aethionema arabicum HOM05D006594 ORTHO05D008383 6.1e-24 115.2 179 40.8
HanXRQChr09g0253731 Helianthus annuus HOM05D006594 ORTHO05D008383 6.1e-24 115.2 179 42.5
Cc02_g03190 Coffea canephora HOM05D006594 ORTHO05D008383 1.0e-23 114.4 153 45.8
Lj1P995T25 Lonicera japonica HOM05D006594 ORTHO05D008383 1.3e-23 114.0 124 49.2
Sp6g14430 Schrenkiella parvula HOM05D006594 ORTHO05D008383 1.3e-23 114.0 179 40.8
A06p20700 Brassica napus HOM05D006594 ORTHO05D008383 2.3e-23 113.2 208 38.0
Thhalv10013484m.g Eutrema salsugineum HOM05D006594 ORTHO05D008383 2.3e-23 113.2 181 40.9
A10p09870 Brassica napus HOM05D006594 ORTHO05D008383 5.1e-23 112.1 208 37.5
BraA10t43068Z Brassica rapa HOM05D006594 ORTHO05D008383 5.1e-23 112.1 208 37.5
Carub.0008s1227 Capsella rubella HOM05D006594 ORTHO05D008383 5.1e-23 112.1 179 41.3
Haze_13736 Corylus avellana HOM05D006594 ORTHO05D008383 5.1e-23 112.1 158 41.8
AT5G52180 Arabidopsis thaliana HOM05D006594 ORTHO05D008383 1.1e-22 110.9 179 39.7
Peaxi162Scf00915g00007 Petunia axillaris HOM05D006594 ORTHO05D008383 1.1e-22 110.9 198 35.9
TWI23G0502 Tripterygium wilfordii HOM05D006594 ORTHO05D008383 1.9e-22 110.2 172 44.2
Solyc03g026010.3 Solanum lycopersicum HOM05D006594 ORTHO05D008383 2.5e-22 109.8 198 37.4
GSVIVG01010594001 Vitis vinifera HOM05D006594 ORTHO05D008383 2.5e-22 109.8 119 50.4
CARHR265100 Cardamine hirsuta HOM05D006594 ORTHO05D008383 3.3e-22 109.4 179 39.1
Manes.06G145800 Manihot esculenta HOM05D006594 ORTHO05D008383 4.3e-22 109.0 162 43.8
AL8G26560 Arabidopsis lyrata HOM05D006594 ORTHO05D008383 5.7e-22 108.6 208 37.0
Sopen03g004840 Solanum pennellii HOM05D006594 ORTHO05D008383 5.7e-22 108.6 198 37.9
PGR142G0281 Punica granatum HOM05D006594 ORTHO05D008383 7.4e-22 108.2 179 38.0
PGSC0003DMG400014324 Solanum tuberosum HOM05D006594 ORTHO05D008383 9.7e-22 107.8 198 37.4
Gohir.D12G260500 Gossypium hirsutum HOM05D006594 ORTHO05D008383 1.6e-21 107.1 110 49.1
Ah.13g068460 Amaranthus hybridus HOM05D006594 ORTHO05D008383 2.8e-21 106.3 147 42.9
SGA_v2.0_scaffold113G31757 Striga asiatica HOM05D006594 ORTHO05D008383 2.8e-21 106.3 120 47.5
Rhsim03G0179000 Rhododendron simsii HOM05D006594 ORTHO05D008383 4.8e-21 105.5 104 52.9
Migut.F01134 Erythranthe guttata HOM05D006594 ORTHO05D008383 1.4e-20 104.0 179 39.7
Gorai.008G279100 Gossypium raimondii HOM05D006594 ORTHO05D008383 1.4e-20 104.0 108 49.1
Actinidia32874 Actinidia chinensis HOM05D006594 ORTHO05D008383 1.8e-20 103.6 105 51.4
Aqoxy7G00398 Aquilegia oxysepala HOM05D006594 ORTHO05D008383 3.1e-20 102.8 194 37.1
MSTRG.8446 Avicennia marina HOM05D006594 ORTHO05D008383 4.1e-20 102.4 120 45.8
PSO478G3258 Papaver somniferum HOM05D006594 ORTHO05D008383 9.0e-20 101.3 157 41.4
Gorai.004G119800 Gossypium raimondii HOM05D006594 ORTHO05D008383 1.2e-19 100.9 186 36.6
THA.LOC104825095 Tarenaya hassleriana HOM05D006594 ORTHO05D008383 1.2e-19 100.9 180 37.8
CAN.G856.1 Capsicum annuum HOM05D006594 ORTHO05D008383 1.5e-19 100.5 198 34.8
SalBow2G3298 Salvia bowleyana HOM05D006594 ORTHO05D008383 1.5e-19 100.5 149 40.3
Sed0005391 Sechium edule HOM05D006594 ORTHO05D008383 1.5e-19 100.5 102 51.0
vmacro06700 Vaccinium macrocarpon HOM05D006594 ORTHO05D008383 1.5e-19 100.5 104 51.9
FAN03G3172 Fragaria x ananassa HOM05D006594 ORTHO05D008383 2.2e-18 96.7 116 50.0
unitig_0.g463 Utricularia gibba HOM05D006594 ORTHO05D008383 6.5e-18 95.1 109 48.6
Dinv28461 Davidia involucrata HOM05D006594 ORTHO05D008383 4.2e-17 92.4 109 45.9
ATR0757G038 Amborella trichopoda HOM05D006594 ORTHO05D008383 1.2e-16 90.9 148 37.2
AUR62021215 Chenopodium quinoa HOM05D006594 ORTHO05D008383 7.9e-16 88.2 117 45.3
MBI12_g14429_MAGBIO Magnolia biondii HOM05D006594 ORTHO05D008383 6.7e-15 85.1 150 40.0
Gohir.D08G112040 Gossypium hirsutum HOM05D006594 ORTHO05D008383 8.8e-15 84.7 185 35.1
AL1G10170 Arabidopsis lyrata HOM05D006594 ORTHO05D008383 2.0e-14 83.6 119 44.5
Gohir.A08G100500 Gossypium hirsutum HOM05D006594 ORTHO05D008383 1.7e-13 80.5 87 50.6
SEGI_30493 Sequoiadendron giganteum HOM05D006594 ORTHO05D008383 5.3e-12 75.5 50 68.0
AUR62016008 Chenopodium quinoa HOM05D006594 ORTHO05D008383 2.2e-10 70.1 128 37.5
Os06g0129000 Oryza sativa ssp. japonica HOM05D006594 ORTHO05D008383 7.2e-09 65.1 94 41.5
Zm00001eb378500 Zea mays HOM05D006594 ORTHO05D008383 1.2e-08 64.3 121 34.7
arahy.Tifrunner.gnm1.ann1.J8117K Arachis hypogaea HOM05D006594 ORTHO05D008383 2.7e-08 63.2 82 47.6
VMungo0331G1728 Vigna mungo HOM05D006594 ORTHO05D008383 4.7e-08 62.4 109 41.3


User provided reference genes

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