Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.A4L1LT Arachis hypogaea HOM05D006294 ORTHO05D007668 2.8e-94 348.6 174 100.0
arahy.Tifrunner.gnm1.ann1.DS4D2V Arachis hypogaea HOM05D006294 ORTHO05D007668 3.6e-57 225.3 217 59.0
arahy.Tifrunner.gnm1.ann1.DZVX1N Arachis hypogaea HOM05D006294 ORTHO05D007668 3.6e-57 225.3 217 59.0
arahy.Tifrunner.gnm1.ann1.SDBD8X Arachis hypogaea HOM05D006294 ORTHO05D007668 3.0e-48 195.7 121 82.6
Lalb_Chr06g0163771 Lupinus albus HOM05D006294 ORTHO05D007668 4.5e-44 181.8 220 46.8
Lj5g0013499 Lotus japonicus HOM05D006294 ORTHO05D007668 4.2e-42 175.3 216 46.8
arahy.Tifrunner.gnm1.ann1.ED6YY1 Arachis hypogaea HOM05D006294 ORTHO05D007668 1.5e-39 166.8 146 62.3
VMungo0720G0114 Vigna mungo HOM05D006294 ORTHO05D007668 1.4e-37 160.2 220 41.4
arahy.Tifrunner.gnm1.ann1.DT0J5B Arachis hypogaea HOM05D006294 ORTHO05D007668 4.5e-36 155.2 101 76.2
Glyma.20G105600 Glycine max HOM05D006294 ORTHO05D007668 1.7e-35 153.3 210 40.5
Medtr1g113720 Medicago truncatula HOM05D006294 ORTHO05D007668 2.5e-34 149.4 207 41.5
arahy.Tifrunner.gnm1.ann1.0NBS6K Arachis hypogaea HOM05D006294 ORTHO05D007668 7.2e-34 147.9 79 88.6
arahy.Tifrunner.gnm1.ann1.27KW97 Arachis hypogaea HOM05D006294 ORTHO05D007668 7.2e-34 147.9 79 88.6
arahy.Tifrunner.gnm1.ann1.5K47IW Arachis hypogaea HOM05D006294 ORTHO05D001225 3.6e-33 145.6 91 74.7
Phvul.007G017200 Phaseolus vulgaris HOM05D006294 ORTHO05D007668 1.0e-32 144.1 220 37.7
Actinidia18031 Actinidia chinensis HOM05D006294 ORTHO05D007668 3.0e-32 142.5 215 39.1
CiPaw.06G119700 Carya illinoinensis HOM05D006294 ORTHO05D007668 3.0e-32 142.5 214 37.9
Dinv41907 Davidia involucrata HOM05D006294 ORTHO05D007668 5.2e-32 141.7 216 37.0
arahy.Tifrunner.gnm1.ann1.PQ7N7P Arachis hypogaea HOM05D006294 ORTHO05D007668 1.2e-31 140.6 88 80.7
CSS0011609 Camellia sinensis var. sinensis HOM05D006294 ORTHO05D007668 3.4e-31 139.0 215 39.5
CSS0032021 Camellia sinensis var. sinensis HOM05D006294 ORTHO05D007668 3.4e-31 139.0 215 39.5
TPR.G2447 Trifolium pratense HOM05D006294 ORTHO05D007668 4.4e-31 138.7 220 40.0
Haze_02090 Corylus avellana HOM05D006294 ORTHO05D007668 9.8e-31 137.5 215 38.1
Prupe.8G170200 Prunus persica HOM05D006294 ORTHO05D007668 1.3e-30 137.1 215 38.1
RcHm_v2.0_Chr6g0279111 Rosa chinensis HOM05D006294 ORTHO05D007668 1.3e-30 137.1 219 37.4
TPR.G2441 Trifolium pratense HOM05D006294 ORTHO05D007668 1.3e-30 137.1 221 39.8
MD10G1129400 Malus domestica HOM05D006294 ORTHO05D007668 1.7e-30 136.7 215 39.5
Ciclev10028424m.g Citrus clementina HOM05D006294 ORTHO05D007668 8.3e-30 134.4 215 36.3
QL11p052544 Quercus lobata HOM05D006294 ORTHO05D007668 8.3e-30 134.4 215 36.7
Manes.04G070000 Manihot esculenta HOM05D006294 ORTHO05D007668 5.4e-29 131.7 230 35.2
Hma1.2p1_0032F.1_g019100 Hydrangea macrophylla HOM05D006294 ORTHO05D007668 2.7e-28 129.4 217 36.4
arahy.Tifrunner.gnm1.ann1.YH938E Arachis hypogaea HOM05D006294 ORTHO05D007668 1.0e-27 127.5 98 66.3
FAN27G0563 Fragaria x ananassa HOM05D006294 ORTHO05D007668 1.0e-27 127.5 219 36.1
Rhsim11G0194300 Rhododendron simsii HOM05D006294 ORTHO05D007668 1.0e-27 127.5 226 35.8
vmacro02296 Vaccinium macrocarpon HOM05D006294 ORTHO05D007668 1.0e-27 127.5 226 35.4
arahy.Tifrunner.gnm1.ann1.VQM2ML Arachis hypogaea HOM05D006294 ORTHO05D007668 1.7e-27 126.7 72 81.9
CANSAT25G0635 Cannabis sativa HOM05D006294 ORTHO05D007668 2.3e-27 126.3 215 37.7
Cfa005297 Carpinus fangiana HOM05D006294 ORTHO05D007668 2.3e-27 126.3 129 51.2
FAN24G2955 Fragaria x ananassa HOM05D006294 ORTHO05D007668 2.3e-27 126.3 219 36.5
FvH4_2g15760 Fragaria vesca HOM05D006294 ORTHO05D007668 2.9e-27 125.9 219 36.1
PGR142G2258 Punica granatum HOM05D006294 ORTHO05D007668 5.0e-27 125.2 215 34.4
FAN15G3675 Fragaria x ananassa HOM05D006294 ORTHO05D007668 8.6e-27 124.4 216 36.1
Thecc.02G053600 Theobroma cacao HOM05D006294 ORTHO05D007668 1.9e-26 123.2 215 33.5
Atru.BG.70.p Acer truncatum HOM05D006294 ORTHO05D007668 4.2e-26 122.1 200 35.0
TWI79G1609 Tripterygium wilfordii HOM05D006294 ORTHO05D007668 2.8e-25 119.4 220 34.1
Lj5A175T99 Lonicera japonica HOM05D006294 ORTHO05D007668 3.6e-25 119.0 225 32.9
FAN20G2719 Fragaria x ananassa HOM05D006294 ORTHO05D007668 8.0e-25 117.9 192 35.4
COL.COLO4_18015 Corchorus olitorius HOM05D006294 ORTHO05D007668 1.0e-24 117.5 215 32.1
Sp3g30330 Schrenkiella parvula HOM05D006294 ORTHO05D007668 5.2e-24 115.2 215 34.9
Aa31LG8G14230 Aethionema arabicum HOM05D006294 ORTHO05D007668 6.8e-24 114.8 235 31.9
Thhalv10022675m.g Eutrema salsugineum HOM05D006294 ORTHO05D007668 6.8e-24 114.8 220 32.3
CsaV3_5G039720 Cucumis sativus L. HOM05D006294 ORTHO05D007668 1.5e-23 113.6 197 35.0
Sed0001766 Sechium edule HOM05D006294 ORTHO05D007668 4.4e-23 112.1 214 32.7
Ca_03291_v3 Cicer arietinum L. HOM05D006294 ORTHO05D007668 7.5e-23 111.3 190 36.8
Gorai.005G255600 Gossypium raimondii HOM05D006294 ORTHO05D007668 7.5e-23 111.3 215 31.2
Gohir.D02G227800 Gossypium hirsutum HOM05D006294 ORTHO05D007668 1.3e-22 110.5 215 30.7
BcaB08g34688 Brassica carinata HOM05D006294 ORTHO05D007668 2.8e-22 109.4 212 33.5
BcaC01g02964 Brassica carinata HOM05D006294 ORTHO05D007668 2.8e-22 109.4 212 33.5
A03p46230 Brassica napus HOM05D006294 ORTHO05D007668 2.8e-22 109.4 212 32.5
BraA03t13747Z Brassica rapa HOM05D006294 ORTHO05D007668 2.8e-22 109.4 212 32.5
ClCG02G011140 Citrullus lanatus HOM05D006294 ORTHO05D007668 3.7e-22 109.0 226 31.9
AT2G17033 Arabidopsis thaliana HOM05D006294 ORTHO05D007668 4.9e-22 108.6 215 32.6
MELO3C022147.2 Cucumis melo HOM05D006294 ORTHO05D007668 4.9e-22 108.6 197 33.5
AL3G49850 Arabidopsis lyrata HOM05D006294 ORTHO05D007668 6.3e-22 108.2 215 32.1
C03p57830 Brassica napus HOM05D006294 ORTHO05D007668 1.8e-21 106.7 212 32.1
BolC3t18054H Brassica oleracea HOM05D006294 ORTHO05D007668 1.8e-21 106.7 212 32.1
Duzib052G0076 Durio zibethinus HOM05D006294 ORTHO05D007668 5.4e-21 105.1 215 31.6
CARHR107360 Cardamine hirsuta HOM05D006294 ORTHO05D007668 1.2e-20 104.0 225 31.1
HanXRQChr10g0300361 Helianthus annuus HOM05D006294 ORTHO05D007668 2.7e-20 102.8 216 31.0
Potri.009G139300 Populus trichocarpa HOM05D006294 ORTHO05D007668 5.9e-20 101.7 213 30.0
PSO541G2965 Papaver somniferum HOM05D006294 ORTHO05D007668 1.3e-19 100.5 216 32.4
Carub.0003s3096 Capsella rubella HOM05D006294 ORTHO05D007668 2.3e-19 99.8 212 32.1
Migut.B00046 Erythranthe guttata HOM05D006294 ORTHO05D007668 2.3e-19 99.8 187 30.5
THA.LOC104819661 Tarenaya hassleriana HOM05D006294 ORTHO05D007668 2.9e-19 99.4 129 41.1
Carub.0135s0001 Capsella rubella HOM05D006294 ORTHO05D007668 5.0e-19 98.6 183 33.3
arahy.Tifrunner.gnm1.ann1.L9KWYC Arachis hypogaea HOM05D006294 ORTHO05D007668 2.5e-18 96.3 68 69.1
arahy.Tifrunner.gnm1.ann1.VRB4HM Arachis hypogaea HOM05D006294 ORTHO05D007668 5.6e-18 95.1 95 55.8
Cc09_g10390 Coffea canephora HOM05D006294 ORTHO05D007668 5.6e-18 95.1 216 28.2
Cpa.g.sc20.124 Carica papaya HOM05D006294 ORTHO05D007668 1.2e-17 94.0 129 41.1
unitig_21.g20844 Utricularia gibba HOM05D006294 ORTHO05D007668 1.6e-17 93.6 235 29.4
GSVIVG01023965001 Vitis vinifera HOM05D006294 ORTHO05D007668 2.1e-17 93.2 127 40.9
SalBow1G5734 Salvia bowleyana HOM05D006294 ORTHO05D007668 4.7e-17 92.0 219 29.2
Ah.11g046440 Amaranthus hybridus HOM05D006294 ORTHO05D007668 1.8e-16 90.1 216 27.3
ECA234G3875 Erigeron canadensis HOM05D006294 ORTHO05D007668 6.8e-16 88.2 218 27.5
Sabra09G0107900 Salix brachista HOM05D006294 ORTHO05D007668 8.9e-16 87.8 96 42.7
MSTRG.19967 Avicennia marina HOM05D006294 ORTHO05D007668 1.5e-15 87.0 131 37.4
Lsat_1_v5_gn_4_70040 Lactuca sativa HOM05D006294 ORTHO05D007668 2.0e-15 86.7 216 26.9
Lsat_1_v5_gn_6_58781 Lactuca sativa HOM05D006294 ORTHO05D007668 4.4e-15 85.5 216 27.3
arahy.Tifrunner.gnm1.ann1.D2HFCL Arachis hypogaea HOM05D006294 ORTHO05D007668 9.8e-15 84.3 50 82.0
Nitab4.5_0016084g0010 Nicotiana tabacum HOM05D006294 ORTHO05D007668 1.3e-14 84.0 130 41.5
Nn5g30865 Nelumbo nucifera HOM05D006294 ORTHO05D007668 8.3e-14 81.3 144 34.7
CAN.G1.72 Capsicum annuum HOM05D006294 ORTHO05D007668 2.4e-13 79.7 128 38.3
PSO675G2411 Papaver somniferum HOM05D006294 ORTHO05D007668 2.4e-13 79.7 129 39.5
Oeu045089.1 Olea europaea HOM05D006294 ORTHO05D007668 3.2e-13 79.3 129 35.7
arahy.Tifrunner.gnm1.ann1.96MTKW Arachis hypogaea HOM05D037792 ORTHO05D007668 3.5e-12 75.9 41 87.8
Nitab4.5_0028029g0010 Nicotiana tabacum HOM05D006294 ORTHO05D007668 3.5e-12 75.9 128 37.5
Peaxi162Scf00042g01217 Petunia axillaris HOM05D006294 ORTHO05D007668 6.0e-12 75.1 124 38.7
PGSC0003DMG400018933 Solanum tuberosum HOM05D006294 ORTHO05D007668 1.0e-11 74.3 128 38.3
Rhsim11G0078500 Rhododendron simsii HOM05D006294 ORTHO05D007668 1.3e-11 73.9 226 27.4
Sopen00g003210 Solanum pennellii HOM05D006294 ORTHO05D007668 2.3e-11 73.2 129 38.8
Solyc10g055700.2 Solanum lycopersicum HOM05D006294 ORTHO05D007668 3.9e-11 72.4 129 38.8
Aqoxy6G01907 Aquilegia oxysepala HOM05D006294 ORTHO05D007668 6.6e-11 71.6 129 33.3
arahy.Tifrunner.gnm1.ann1.5ZBU4W Arachis hypogaea HOM05D037792 ORTHO05D087045 1.1e-10 70.9 41 82.9
arahy.Tifrunner.gnm1.ann1.FWIT3W Arachis hypogaea HOM05D037792 ORTHO05D083057 1.1e-10 70.9 41 82.9
Eucgr.I01461 Eucalyptus grandis HOM05D006294 ORTHO05D007668 1.9e-10 70.1 117 34.2
arahy.Tifrunner.gnm1.ann1.K1Y931 Arachis hypogaea HOM05D006294 ORTHO05D007668 3.1e-08 62.8 39 71.8
CDE05G1346 Ceratophyllum demersum HOM05D006294 ORTHO05D007668 2.6e-07 59.7 122 32.0
ATR0661G309 Amborella trichopoda HOM05D006294 ORTHO05D007668 8.3e-06 54.7 213 24.4


User provided reference genes

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