Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.A1M8SQ Arachis hypogaea HOM05D007571 ORTHO05D009439 3.9e-61 238.0 127 100.0
arahy.Tifrunner.gnm1.ann1.I40GDJ Arachis hypogaea HOM05D007571 ORTHO05D009439 3.3e-60 235.0 127 98.4
Lj5g0013426 Lotus japonicus HOM05D007571 ORTHO05D009439 6.9e-42 174.1 125 74.4
Glyma.10G256000 Glycine max HOM05D007571 ORTHO05D009439 2.6e-41 172.2 130 74.6
Phvul.007G046800 Phaseolus vulgaris HOM05D007571 ORTHO05D009439 1.7e-40 169.5 125 68.8
TPR.G21146 Trifolium pratense HOM05D007571 ORTHO05D009439 1.4e-39 166.4 127 69.3
QL11p029955 Quercus lobata HOM05D007571 ORTHO05D009439 1.3e-37 159.8 126 63.5
Lalb_Chr21g0308001 Lupinus albus HOM05D007571 ORTHO05D009439 3.9e-37 158.3 128 72.7
VMungo0720G0585 Vigna mungo HOM05D007571 ORTHO05D009439 2.5e-36 155.6 121 67.8
Medtr1g106075 Medicago truncatula HOM05D007571 ORTHO05D009439 1.3e-35 153.3 129 65.1
Thecc.02G118900 Theobroma cacao HOM05D007571 ORTHO05D009439 6.9e-34 147.5 141 57.4
MD10G1108300 Malus domestica HOM05D007571 ORTHO05D009439 1.2e-33 146.7 127 62.2
Haze_10272 Corylus avellana HOM05D007571 ORTHO05D009439 1.5e-33 146.4 128 65.6
Medtr3g008630 Medicago truncatula HOM05D007571 ORTHO05D009439 1.5e-33 146.4 129 62.8
Atru.chr5.2324 Acer truncatum HOM05D007571 ORTHO05D009439 2.6e-33 145.6 129 61.2
Ciclev10029547m.g Citrus clementina HOM05D007571 ORTHO05D009439 1.7e-32 142.9 132 58.3
Potri.001G292000 Populus trichocarpa HOM05D007571 ORTHO05D009439 1.7e-32 142.9 129 55.8
Duzib052G0547 Durio zibethinus HOM05D007571 ORTHO05D009439 3.8e-32 141.7 139 54.0
TWI59G0511 Tripterygium wilfordii HOM05D007571 ORTHO05D009439 3.8e-32 141.7 127 56.7
Gohir.D12G019350 Gossypium hirsutum HOM05D007571 ORTHO05D009439 2.4e-31 139.0 140 54.3
Prupe.8G147200 Prunus persica HOM05D007571 ORTHO05D009439 3.2e-31 138.7 127 61.4
CANSAT25G0272 Cannabis sativa HOM05D007571 ORTHO05D009439 4.2e-31 138.3 127 59.1
CANSAT25G2750 Cannabis sativa HOM05D007571 ORTHO05D009439 4.2e-31 138.3 127 59.1
COL.COLO4_32496 Corchorus olitorius HOM05D007571 ORTHO05D009439 5.5e-31 137.9 140 53.6
Gohir.A12G018900 Gossypium hirsutum HOM05D007571 ORTHO05D009439 7.9e-30 134.0 140 51.4
RcHm_v2.0_Chr6g0252541 Rosa chinensis HOM05D007571 ORTHO05D009439 3.9e-29 131.7 127 58.3
Eucgr.G01203 Eucalyptus grandis HOM05D007571 ORTHO05D009439 5.1e-29 131.3 129 59.7
FvH4_2g03581 Fragaria vesca HOM05D007571 ORTHO05D009439 4.3e-28 128.3 127 56.7
Sed0007395 Sechium edule HOM05D007571 ORTHO05D009439 4.3e-28 128.3 136 55.1
CsaV3_7G007730 Cucumis sativus L. HOM05D007571 ORTHO05D009439 9.6e-28 127.1 131 55.7
FAN20G2923 Fragaria x ananassa HOM05D007571 ORTHO05D009439 9.6e-28 127.1 127 55.9
GSVIVG01037807001 Vitis vinifera HOM05D007571 ORTHO05D009439 1.6e-27 126.3 121 58.7
MELO3C018528.2 Cucumis melo HOM05D007571 ORTHO05D009439 2.8e-27 125.6 132 54.5
Hund06510 Selenicereus undatus HOM05D007571 ORTHO05D009439 3.7e-27 125.2 138 54.3
PGR042G0328 Punica granatum HOM05D007571 ORTHO05D009439 4.8e-27 124.8 140 52.1
TAR628G1270 Trochodendron aralioides HOM05D007571 ORTHO05D009439 4.8e-27 124.8 130 52.3
Actinidia27996 Actinidia chinensis HOM05D007571 ORTHO05D009439 6.2e-27 124.4 125 57.6
Carub.0001s3916 Capsella rubella HOM05D007571 ORTHO05D009439 8.2e-27 124.0 127 52.8
Actinidia04391 Actinidia chinensis HOM05D007571 ORTHO05D009439 1.4e-26 123.2 125 58.4
Thhalv10011862m.g Eutrema salsugineum HOM05D007571 ORTHO05D009439 1.4e-26 123.2 127 52.0
Sabra16G0182000 Salix brachista HOM05D007571 ORTHO05D009439 1.4e-26 123.2 170 42.4
THA.LOC104825387 Tarenaya hassleriana HOM05D007571 ORTHO05D009439 1.4e-26 123.2 127 54.3
AL1G57530 Arabidopsis lyrata HOM05D007571 ORTHO05D009439 2.4e-26 122.5 127 52.8
Sp1g36830 Schrenkiella parvula HOM05D007571 ORTHO05D009439 2.4e-26 122.5 127 52.8
AT1G49975 Arabidopsis thaliana HOM05D007571 ORTHO05D009439 4.0e-26 121.7 127 52.8
CSS0048413 Camellia sinensis var. sinensis HOM05D007571 ORTHO05D009439 5.3e-26 121.3 131 53.4
vmacro19538 Vaccinium macrocarpon HOM05D007571 ORTHO05D009439 1.5e-25 119.8 89 66.3
Cc02_g09420 Coffea canephora HOM05D007571 ORTHO05D009439 3.4e-25 118.6 125 56.8
CAN.G1433.5 Capsicum annuum HOM05D007571 ORTHO05D009439 5.8e-25 117.9 127 50.4
Rhsim05G0092500 Rhododendron simsii HOM05D007571 ORTHO05D009439 7.6e-25 117.5 127 49.6
Dinv15820 Davidia involucrata HOM05D007571 ORTHO05D009439 2.2e-24 115.9 91 67.0
Ah.01g007010 Amaranthus hybridus HOM05D007571 ORTHO05D009439 6.5e-24 114.4 97 61.9
ClCG02G007100 Citrullus lanatus HOM05D007571 ORTHO05D009439 8.4e-24 114.0 132 51.5
Sc05g0005590 Simmondsia chinensis HOM05D007571 ORTHO05D009439 1.9e-23 112.8 99 61.6
EL10Ac9g22184 Beta vulgaris HOM05D007571 ORTHO05D009439 3.2e-23 112.1 119 55.5
ECA238G3778 Erigeron canadensis HOM05D007571 ORTHO05D009439 3.2e-23 112.1 131 53.4
A06p03470 Brassica napus HOM05D007571 ORTHO05D009439 4.2e-23 111.7 127 51.2
BraA06t23555Z Brassica rapa HOM05D007571 ORTHO05D009439 4.2e-23 111.7 127 51.2
C06p04720 Brassica napus HOM05D007571 ORTHO05D009439 5.5e-23 111.3 127 51.2
Lsat_1_v5_gn_2_105800 Lactuca sativa HOM05D007571 ORTHO05D009439 5.5e-23 111.3 130 55.4
Solyc05g150152.1 Solanum lycopersicum HOM05D007571 ORTHO05D009439 7.1e-23 110.9 86 65.1
Aqoxy6G02559 Aquilegia oxysepala HOM05D007571 ORTHO05D009439 9.3e-23 110.5 131 48.1
Gorai.008G019700 Gossypium raimondii HOM05D005832 ORTHO05D007117 9.3e-23 110.5 129 47.3
BcaC08g43171 Brassica carinata HOM05D007571 ORTHO05D009439 1.2e-22 110.2 127 52.0
Sopen05g033610 Solanum pennellii HOM05D007571 ORTHO05D009439 1.6e-22 109.8 86 64.0
BcaB07g33447 Brassica carinata HOM05D007571 ORTHO05D009439 2.1e-22 109.4 127 49.6
Nitab4.5_0017347g0020 Nicotiana tabacum HOM05D007571 ORTHO05D009439 3.5e-22 108.6 125 53.6
Gohir.D12G019400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 6.0e-22 107.8 131 46.6
HanXRQChr02g0053531 Helianthus annuus HOM05D007571 ORTHO05D009439 1.8e-21 106.3 128 52.3
AUR62030860 Chenopodium quinoa HOM05D007571 ORTHO05D009439 2.3e-21 105.9 73 71.2
Peaxi162Scf00519g00423 Petunia axillaris HOM05D007571 ORTHO05D009439 3.0e-21 105.5 86 64.0
Nitab4.5_0000687g0180 Nicotiana tabacum HOM05D007571 ORTHO05D009439 1.1e-20 103.6 125 50.4
SalBow6G2573 Salvia bowleyana HOM05D007571 ORTHO05D009439 1.1e-20 103.6 125 49.6
MSTRG.417 Avicennia marina HOM05D007571 ORTHO05D009439 1.9e-20 102.8 88 67.0
Nn6g34507 Nelumbo nucifera HOM05D007571 ORTHO05D009439 2.5e-20 102.4 92 59.8
CDE04G1832 Ceratophyllum demersum HOM05D007571 ORTHO05D009439 5.7e-20 101.3 126 49.2
Oeu024805.1 Olea europaea HOM05D007571 ORTHO05D009439 5.7e-20 101.3 127 48.0
Os03g0731100 Oryza sativa ssp. japonica HOM05D007571 ORTHO05D009439 5.7e-20 101.3 122 48.4
Migut.F01585 Erythranthe guttata HOM05D007571 ORTHO05D009439 4.8e-19 98.2 71 71.8
MBI16_g39621_MAGBIO Magnolia biondii HOM05D007571 ORTHO05D009439 4.8e-19 98.2 125 48.8
MBI16_g43666_MAGBIO Magnolia biondii HOM05D007571 ORTHO05D009439 4.8e-19 98.2 125 48.8
PSO675G4064 Papaver somniferum HOM05D007571 ORTHO05D009439 8.2e-19 97.4 133 42.9
BolC6t35600H Brassica oleracea HOM05D007571 ORTHO05D009439 1.1e-18 97.1 156 42.9
DCAR_028375 Daucus carota HOM05D007571 ORTHO05D009439 1.1e-18 97.1 125 50.4
CiPaw.05G019300 Carya illinoinensis HOM05D000470 ORTHO05D000348 2.6e-17 92.4 61 75.4
Zm00001eb056210 Zea mays HOM05D007571 ORTHO05D009439 2.6e-17 92.4 87 55.2
PSO541G4064 Papaver somniferum HOM05D007571 ORTHO05D009439 7.6e-17 90.9 131 43.5
CARHR040010 Cardamine hirsuta HOM05D007571 ORTHO05D009439 8.5e-16 87.4 65 60.0
PGSC0003DMG400023397 Solanum tuberosum HOM05D007571 ORTHO05D009439 4.2e-15 85.1 65 66.2
ATR0739G046 Amborella trichopoda HOM05D007571 ORTHO05D009439 2.1e-14 82.8 64 67.2
SGA_v2.0_scaffold62G21311 Striga asiatica HOM05D007002 ORTHO05D008602 2.7e-14 82.4 59 69.5
SEGI_38446 Sequoiadendron giganteum HOM05D007571 ORTHO05D009439 1.0e-13 80.5 77 55.8
AagrBONN_evm.TU.Sc2ySwM_228.3762 Anthoceros agrestis HOM05D007571 ORTHO05D009439 4.8e-11 71.6 67 50.7
Manes.07G054000 Manihot esculenta HOM05D007571 ORTHO05D009439 1.2e-09 67.0 83 50.6
SalBow6G2452 Salvia bowleyana HOM05D007571 ORTHO05D009439 1.5e-09 66.6 67 55.2
CBR_g6736 Chara braunii HOM05D007571 ORTHO05D009439 7.7e-09 64.3 66 48.5
Potri.009G086400 Populus trichocarpa HOM05D007571 ORTHO05D009439 7.7e-09 64.3 79 48.1
Aa31LG10G4150 Aethionema arabicum HOM05D007571 ORTHO05D009439 5.0e-08 61.6 84 47.6
Pp3c17_8360 Physcomitrium patens HOM05D007571 ORTHO05D009439 1.9e-07 59.7 64 48.4


User provided reference genes

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