Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.9XRG1B Arachis hypogaea HOM05D003458 ORTHO05D003854 2.4e-32 141.4 63 100.0
arahy.Tifrunner.gnm1.ann1.HTFE1H Arachis hypogaea HOM05D003458 ORTHO05D003854 5.5e-32 140.2 63 98.4
arahy.Tifrunner.gnm1.ann1.RZ8KW2 Arachis hypogaea HOM05D003458 ORTHO05D003854 1.6e-31 138.7 63 96.8
arahy.Tifrunner.gnm1.ann1.G8IK15 Arachis hypogaea HOM05D003458 ORTHO05D003854 4.6e-31 137.1 63 95.2
arahy.Tifrunner.gnm1.ann1.A1Q64B Arachis hypogaea HOM05D003458 ORTHO05D003854 6.0e-31 136.7 63 95.2
arahy.Tifrunner.gnm1.ann1.VHV24A Arachis hypogaea HOM05D003458 ORTHO05D003854 6.0e-31 136.7 63 95.2
Dinv21418 Davidia involucrata HOM05D003458 ORTHO05D003854 6.0e-23 110.2 63 81.0
Hma1.2p1_0109F.1_g052660 Hydrangea macrophylla HOM05D003458 ORTHO05D003854 6.0e-23 110.2 63 79.4
Dinv23277 Davidia involucrata HOM05D003458 ORTHO05D003854 1.3e-22 109.0 63 79.4
Glyma.08G220000 Glycine max HOM05D003458 ORTHO05D003854 1.8e-22 108.6 63 79.4
Hma1.2p1_0329F.1_g127190 Hydrangea macrophylla HOM05D003458 ORTHO05D003854 1.8e-22 108.6 63 79.4
arahy.Tifrunner.gnm1.ann1.52HH2Q Arachis hypogaea HOM05D003458 ORTHO05D003854 2.3e-22 108.2 63 76.2
arahy.Tifrunner.gnm1.ann1.BDT6Z1 Arachis hypogaea HOM05D003458 ORTHO05D003854 2.3e-22 108.2 63 76.2
CSS0014583 Camellia sinensis var. sinensis HOM05D003458 ORTHO05D003854 2.3e-22 108.2 63 79.4
Solyc06g068500.3 Solanum lycopersicum HOM05D003458 ORTHO05D003854 3.0e-22 107.8 63 77.8
Sopen06g025750 Solanum pennellii HOM05D003458 ORTHO05D003854 3.0e-22 107.8 63 77.8
Lalb_Chr01g0012021 Lupinus albus HOM05D003458 ORTHO05D003854 3.9e-22 107.5 63 79.4
PGSC0003DMG400028488 Solanum tuberosum HOM05D003458 ORTHO05D003854 6.7e-22 106.7 63 76.2
Thecc.06G043800 Theobroma cacao HOM05D003458 ORTHO05D003854 6.7e-22 106.7 63 79.4
Cc04_g05210 Coffea canephora HOM05D003458 ORTHO05D003854 1.9e-21 105.1 63 73.0
Glyma.07G021800 Glycine max HOM05D003458 ORTHO05D003854 1.9e-21 105.1 63 79.4
Nitab4.5_0000886g0060 Nicotiana tabacum HOM05D003458 ORTHO05D003854 1.9e-21 105.1 63 73.0
Cfa001871 Carpinus fangiana HOM05D003458 ORTHO05D003854 4.3e-21 104.0 63 74.6
Lsat_1_v5_gn_4_86780 Lactuca sativa HOM05D003458 ORTHO05D003854 4.3e-21 104.0 63 74.6
Lsat_1_v5_gn_4_86800 Lactuca sativa HOM05D003458 ORTHO05D003854 4.3e-21 104.0 63 74.6
Nitab4.5_0008962g0050 Nicotiana tabacum HOM05D003458 ORTHO05D003854 4.3e-21 104.0 63 73.0
HanXRQChr16g0499401 Helianthus annuus HOM05D003458 ORTHO05D003854 5.7e-21 103.6 63 74.6
Haze_16677 Corylus avellana HOM05D003458 ORTHO05D003854 9.6e-21 102.8 63 73.0
MD09G1225800 Malus domestica HOM05D003458 ORTHO05D003854 9.6e-21 102.8 63 73.0
MSTRG.9399 Avicennia marina HOM05D003458 ORTHO05D003854 1.3e-20 102.4 63 74.6
Oeu018279.2 Olea europaea HOM05D003458 ORTHO05D003854 1.3e-20 102.4 63 76.2
Eucgr.F03977 Eucalyptus grandis HOM05D003458 ORTHO05D003854 1.6e-20 102.1 63 76.2
Prupe.3G100300 Prunus persica HOM05D003458 ORTHO05D003854 1.6e-20 102.1 63 74.6
Sabra03G0134200 Salix brachista HOM05D003458 ORTHO05D003854 1.6e-20 102.1 64 75.0
TWI12G1059 Tripterygium wilfordii HOM05D003458 ORTHO05D003854 1.6e-20 102.1 63 74.6
Lalb_Chr25g0278771 Lupinus albus HOM05D003458 ORTHO05D003854 2.8e-20 101.3 63 71.4
HanXRQChr09g0274111 Helianthus annuus HOM05D003458 ORTHO05D003854 3.7e-20 100.9 63 73.0
Potri.003G183700 Populus trichocarpa HOM05D003458 ORTHO05D003854 3.7e-20 100.9 64 73.4
TWI18G0048 Tripterygium wilfordii HOM05D003458 ORTHO05D003854 3.7e-20 100.9 63 73.0
TAR383G0585 Trochodendron aralioides HOM05D003458 ORTHO05D003854 4.8e-20 100.5 63 73.0
Ciclev10026659m.g Citrus clementina HOM05D003458 ORTHO05D003854 8.2e-20 99.8 63 73.0
TAR625G0694 Trochodendron aralioides HOM05D003458 ORTHO05D003854 8.2e-20 99.8 63 76.2
CAN.G1932.6 Capsicum annuum HOM05D003458 ORTHO05D003854 1.1e-19 99.4 63 73.0
Oeu004558.1 Olea europaea HOM05D003458 ORTHO05D003854 1.1e-19 99.4 64 75.0
Eucgr.F03971 Eucalyptus grandis HOM05D003458 ORTHO05D003854 1.4e-19 99.0 63 71.4
HanXRQChr02g0034051 Helianthus annuus HOM05D003458 ORTHO05D003854 1.4e-19 99.0 63 71.4
Manes.11G068500 Manihot esculenta HOM05D003458 ORTHO05D003854 1.8e-19 98.6 64 70.3
CiPaw.01G255600 Carya illinoinensis HOM05D003458 ORTHO05D003854 2.4e-19 98.2 63 73.0
TAR636G1057 Trochodendron aralioides HOM05D003458 ORTHO05D003854 2.4e-19 98.2 62 72.6
MELO3C026732.2 Cucumis melo HOM05D003458 ORTHO05D003854 3.1e-19 97.8 63 74.6
Solyc03g117590.3 Solanum lycopersicum HOM05D003458 ORTHO05D003854 3.1e-19 97.8 63 71.4
Sopen03g036500 Solanum pennellii HOM05D003458 ORTHO05D003854 3.1e-19 97.8 63 71.4
Cpa.g.sc362.2 Carica papaya HOM05D003458 ORTHO05D003854 4.1e-19 97.4 63 74.6
Manes.04G101600 Manihot esculenta HOM05D003458 ORTHO05D003854 4.1e-19 97.4 65 69.2
ECA232G4261 Erigeron canadensis HOM05D003458 ORTHO05D003854 6.9e-19 96.7 65 69.2
Eucgr.J03121 Eucalyptus grandis HOM05D003458 ORTHO05D003854 6.9e-19 96.7 63 65.1
PGSC0003DMG400014210 Solanum tuberosum HOM05D003458 ORTHO05D003854 6.9e-19 96.7 63 71.4
PGR031G3767 Punica granatum HOM05D003458 ORTHO05D003854 9.0e-19 96.3 63 68.3
PGR037G0008 Punica granatum HOM05D003458 ORTHO05D003854 9.0e-19 96.3 63 68.3
PGR102G2985 Punica granatum HOM05D003458 ORTHO05D003854 9.0e-19 96.3 64 68.8
Peaxi162Scf00207g00438 Petunia axillaris HOM05D003458 ORTHO05D003854 1.2e-18 95.9 63 69.8
Sed0021285 Sechium edule HOM05D003458 ORTHO05D003854 1.2e-18 95.9 64 68.8
CAN.G407.1 Capsicum annuum HOM05D003458 ORTHO05D003854 1.5e-18 95.5 63 69.8
Potri.001G043100 Populus trichocarpa HOM05D003458 ORTHO05D003854 2.0e-18 95.1 63 66.7
Sabra01G0029600 Salix brachista HOM05D003458 ORTHO05D003854 2.0e-18 95.1 63 66.7
MSTRG.11188 Avicennia marina HOM05D003458 ORTHO05D003854 2.6e-18 94.7 63 71.4
CiPaw.02G162800 Carya illinoinensis HOM05D003458 ORTHO05D003854 3.4e-18 94.4 58 77.6
ClCG10G012870 Citrullus lanatus HOM05D003458 ORTHO05D003854 3.4e-18 94.4 63 69.8
QL05p036319 Quercus lobata HOM05D003458 ORTHO05D003854 3.4e-18 94.4 62 71.0
FvH4_6g28480 Fragaria vesca HOM05D003458 ORTHO05D003854 4.5e-18 94.0 63 68.3
FAN02G0674 Fragaria x ananassa HOM05D003458 ORTHO05D003854 5.9e-18 93.6 63 68.3
FAN05G3986 Fragaria x ananassa HOM05D003458 ORTHO05D003854 5.9e-18 93.6 63 68.3
FAN14G3070 Fragaria x ananassa HOM05D003458 ORTHO05D003854 5.9e-18 93.6 63 68.3
MSTRG.22803 Avicennia marina HOM05D003458 ORTHO05D003854 7.6e-18 93.2 63 71.4
Lsat_1_v5_gn_1_30900 Lactuca sativa HOM05D003458 ORTHO05D003854 7.6e-18 93.2 63 66.7
RcHm_v2.0_Chr2g0132701 Rosa chinensis HOM05D003458 ORTHO05D003854 1.0e-17 92.8 63 66.7
unitig_61.g26225 Utricularia gibba HOM05D003458 ORTHO05D003854 1.0e-17 92.8 63 69.8
Sed0018915 Sechium edule HOM05D003458 ORTHO05D003854 1.3e-17 92.4 63 68.3
ECA247G3925 Erigeron canadensis HOM05D003458 ORTHO05D003854 2.2e-17 91.7 63 63.5
MBI14_g09104_MAGBIO Magnolia biondii HOM05D003458 ORTHO05D003854 3.8e-17 90.9 63 68.3
Gohir.D05G119000 Gossypium hirsutum HOM05D003458 ORTHO05D003854 6.5e-17 90.1 63 68.3
Gorai.009G122900 Gossypium raimondii HOM05D003458 ORTHO05D003854 6.5e-17 90.1 63 68.3
Lj3g0007846 Lotus japonicus HOM05D003458 ORTHO05D003854 6.5e-17 90.1 63 68.3
EL10Ac5g11419 Beta vulgaris HOM05D003458 ORTHO05D003854 8.5e-17 89.7 63 65.1
CANSAT56G4248 Cannabis sativa HOM05D003458 ORTHO05D003854 1.1e-16 89.4 63 68.3
Lj3g0014635 Lotus japonicus HOM05D003458 ORTHO05D003854 2.5e-16 88.2 64 71.9
MD17G1224600 Malus domestica HOM05D003458 ORTHO05D003854 2.5e-16 88.2 64 65.6
Atru.chr1.2783 Acer truncatum HOM05D003458 ORTHO05D003854 3.2e-16 87.8 63 66.7
PSO017G5603 Papaver somniferum HOM05D003458 ORTHO05D003854 3.2e-16 87.8 66 66.7
PSO063G6005 Papaver somniferum HOM05D003458 ORTHO05D003854 3.2e-16 87.8 66 66.7
MBI15_g18233_MAGBIO Magnolia biondii HOM05D003458 ORTHO05D003854 7.2e-16 86.7 63 65.1
THA.LOC104812418 Tarenaya hassleriana HOM05D003458 ORTHO05D003854 7.2e-16 86.7 63 61.9
GSVIVG01015991001 Vitis vinifera HOM05D003458 ORTHO05D003854 9.3e-16 86.3 63 66.7
Medtr4g007300 Medicago truncatula HOM05D003458 ORTHO05D003854 1.6e-15 85.5 64 65.6
SalBow6G5477 Salvia bowleyana HOM05D003458 ORTHO05D003854 2.1e-15 85.1 63 66.7
Migut.I00685 Erythranthe guttata HOM05D003458 ORTHO05D003854 3.6e-15 84.3 63 63.5
Gohir.A05G118300 Gossypium hirsutum HOM05D003458 ORTHO05D003854 3.6e-15 84.3 63 68.3
Actinidia18254 Actinidia chinensis HOM05D003458 ORTHO05D003854 6.1e-15 83.6 63 63.5
DCAR_016307 Daucus carota HOM05D003458 ORTHO05D003854 1.0e-14 82.8 37 89.2
DCAR_016308 Daucus carota HOM05D003458 ORTHO05D003854 1.0e-14 82.8 37 89.2
AUR62025872 Chenopodium quinoa HOM05D003458 ORTHO05D003854 1.8e-14 82.0 64 60.9
DCAR_025553 Daucus carota HOM05D003458 ORTHO05D003854 1.8e-14 82.0 63 60.3
Duzib160G0069 Durio zibethinus HOM05D003458 ORTHO05D003854 1.8e-14 82.0 63 60.3
VMungo0331G1722 Vigna mungo HOM05D003458 ORTHO05D003854 2.3e-14 81.6 63 61.9
Actinidia25473 Actinidia chinensis HOM05D003458 ORTHO05D003854 1.1e-13 79.3 66 60.6
unitig_0.g1100 Utricularia gibba HOM05D003458 ORTHO05D003854 1.1e-13 79.3 63 63.5
AUR62029843 Chenopodium quinoa HOM05D003458 ORTHO05D003854 1.9e-13 78.6 64 62.5
COL.COLO4_26747 Corchorus olitorius HOM05D003458 ORTHO05D003854 3.3e-13 77.8 64 64.1
Aa31LG4G1230 Aethionema arabicum HOM05D003458 ORTHO05D003854 7.4e-13 76.6 56 66.1
Duzib235G1193 Durio zibethinus HOM05D003458 ORTHO05D003854 9.7e-13 76.3 63 63.5
BcaB05g25215 Brassica carinata HOM05D003458 ORTHO05D003854 1.6e-12 75.5 59 61.0
Duzib235G0945 Durio zibethinus HOM05D003458 ORTHO05D003854 2.2e-12 75.1 64 62.5
Sp5g34820 Schrenkiella parvula HOM05D003458 ORTHO05D003854 2.2e-12 75.1 59 61.0
Peaxi162Scf00553g00055 Petunia axillaris HOM05D003458 ORTHO05D003854 2.8e-12 74.7 64 59.4
Thhalv10019250m.g Eutrema salsugineum HOM05D003458 ORTHO05D003854 3.7e-12 74.3 59 59.3
Phvul.010G162600 Phaseolus vulgaris HOM05D003458 ORTHO05D003854 3.7e-12 74.3 61 62.3
BcaB02g08712 Brassica carinata HOM05D003458 ORTHO05D003854 6.3e-12 73.6 36 77.8
BcaC08g45347 Brassica carinata HOM05D003458 ORTHO05D003854 6.3e-12 73.6 36 77.8
A02p23060 Brassica napus HOM05D003458 ORTHO05D003854 6.3e-12 73.6 36 77.8
A07p26930 Brassica napus HOM05D003458 ORTHO05D003854 6.3e-12 73.6 36 77.8
A07p44770 Brassica napus HOM05D003458 ORTHO05D003854 6.3e-12 73.6 36 77.8
C06p29610 Brassica napus HOM05D003458 ORTHO05D003854 6.3e-12 73.6 36 77.8
BolC2t09685H Brassica oleracea HOM05D003458 ORTHO05D003854 6.3e-12 73.6 36 77.8
BolC6t38126H Brassica oleracea HOM05D003458 ORTHO05D003854 6.3e-12 73.6 36 77.8
BraA02t07304Z Brassica rapa HOM05D003458 ORTHO05D003854 6.3e-12 73.6 36 77.8
BraA07t30338Z Brassica rapa HOM05D003458 ORTHO05D003854 6.3e-12 73.6 36 77.8
BraA07t31985Z Brassica rapa HOM05D003458 ORTHO05D003854 6.3e-12 73.6 36 77.8
Migut.D01129 Erythranthe guttata HOM05D003458 ORTHO05D003854 6.3e-12 73.6 63 58.7
ATR0580G394 Amborella trichopoda HOM05D003458 ORTHO05D003854 1.4e-11 72.4 64 59.4
CARHR073560 Cardamine hirsuta HOM05D003458 ORTHO05D003854 1.4e-11 72.4 36 75.0
Ca_06645_v3 Cicer arietinum L. HOM05D003458 ORTHO05D003854 1.4e-11 72.4 63 61.9
BcaC08g47535 Brassica carinata HOM05D003458 ORTHO05D003854 1.8e-11 72.0 36 75.0
C02p36810 Brassica napus HOM05D003458 ORTHO05D003854 1.8e-11 72.0 36 75.0
BolC6t40375H Brassica oleracea HOM05D003458 ORTHO05D003854 1.8e-11 72.0 36 75.0
C06p53590 Brassica napus HOM05D003458 ORTHO05D003854 5.3e-11 70.5 36 72.2
Aqoxy7G03379 Aquilegia oxysepala HOM05D003458 ORTHO05D003854 1.5e-10 68.9 64 60.9
ECA246G2335 Erigeron canadensis HOM05D003458 ORTHO05D003854 2.0e-10 68.6 39 69.2
CDE02G3149 Ceratophyllum demersum HOM05D003458 ORTHO05D003854 3.4e-10 67.8 63 55.6
Actinidia08942 Actinidia chinensis HOM05D000470 ORTHO05D003854 4.5e-10 67.4 62 53.2
Ah.01g016990 Amaranthus hybridus HOM05D003458 ORTHO05D003854 4.5e-10 67.4 64 57.8
Psat7g263240 Pisum sativum HOM05D003458 ORTHO05D003854 4.5e-10 67.4 65 50.8
CDE04G0124 Ceratophyllum demersum HOM05D003458 ORTHO05D003854 7.7e-10 66.6 63 55.6
BcaC03g15919 Brassica carinata HOM05D003458 ORTHO05D003854 1.9e-08 62.0 34 70.6
arahy.Tifrunner.gnm1.ann1.NIPD93 Arachis hypogaea HOM05D003458 ORTHO05D003854 1.8e-06 55.5 30 93.3
Mapoly0124s0043 Marchantia polymorpha HOM05D003458 ORTHO05D003854 8.8e-06 53.1 42 54.8


User provided reference genes

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