Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.9U5DT8 Arachis hypogaea HOM05D012119 ORTHO05D002375 6.2e-107 391.0 220 100.0
arahy.Tifrunner.gnm1.ann1.RDUL0C Arachis hypogaea HOM05D012119 ORTHO05D002375 1.4e-103 379.8 220 97.7
VMungo0647G1593 Vigna mungo HOM05D012119 ORTHO05D002375 1.3e-32 144.1 222 47.3
Glyma.02G210300 Glycine max HOM05D012119 ORTHO05D002375 2.2e-32 143.3 224 46.4
Glyma.14G177800 Glycine max HOM05D012119 ORTHO05D002375 5.0e-32 142.1 220 46.8
Phvul.008G177300 Phaseolus vulgaris HOM05D012119 ORTHO05D002375 1.5e-31 140.6 221 50.2
arahy.Tifrunner.gnm1.ann1.30DIRF Arachis hypogaea HOM05D012119 ORTHO05D002375 5.5e-31 138.7 227 48.0
Lalb_Chr10g0102541 Lupinus albus HOM05D012119 ORTHO05D002375 8.0e-30 134.8 224 52.7
arahy.Tifrunner.gnm1.ann1.69RQXC Arachis hypogaea HOM05D012119 ORTHO05D002375 2.8e-27 126.3 228 46.9
Glyma.02G210100 Glycine max HOM05D012119 ORTHO05D002375 2.4e-26 123.2 211 42.7
Lalb_Chr17g0344311 Lupinus albus HOM05D012119 ORTHO05D002375 4.5e-25 119.0 140 51.4
Medtr5g064840 Medicago truncatula HOM05D012119 ORTHO05D002375 8.6e-24 114.8 226 48.2
Glyma.02G210000 Glycine max HOM05D012119 ORTHO05D002375 3.7e-19 99.4 223 45.7
arahy.Tifrunner.gnm1.ann1.3HQ27V Arachis hypogaea HOM05D012119 ORTHO05D002375 1.6e-14 84.0 240 37.9
CiPaw.15G045000 Carya illinoinensis HOM05D004728 ORTHO05D002375 2.8e-14 83.2 140 42.9
CiPaw.15G045100 Carya illinoinensis HOM05D004728 ORTHO05D002375 2.8e-14 83.2 140 42.1
CiPaw.16G032300 Carya illinoinensis HOM05D004728 ORTHO05D002375 3.1e-13 79.7 125 46.4
Thecc.08G100900 Theobroma cacao HOM05D004728 ORTHO05D002375 8.9e-13 78.2 140 47.1
Gohir.A02G076900 Gossypium hirsutum HOM05D004728 ORTHO05D002375 1.2e-12 77.8 149 38.9
arahy.Tifrunner.gnm1.ann1.HV7MU1 Arachis hypogaea HOM05D012119 ORTHO05D002375 2.0e-12 77.0 240 37.5
CiPaw.16G032400 Carya illinoinensis HOM05D004728 ORTHO05D002375 3.4e-12 76.3 125 48.0
CSS0049063 Camellia sinensis var. sinensis HOM05D004728 ORTHO05D002375 4.4e-12 75.9 159 41.5
Dinv07081 Davidia involucrata HOM05D004728 ORTHO05D002375 5.8e-12 75.5 188 39.9
MD08G1189800 Malus domestica HOM05D004728 ORTHO05D002375 5.8e-12 75.5 151 36.4
Cfa017899 Carpinus fangiana HOM05D004728 ORTHO05D002375 7.5e-12 75.1 144 41.0
Cfa017900 Carpinus fangiana HOM05D004728 ORTHO05D002375 7.5e-12 75.1 139 39.6
PGR042G1769 Punica granatum HOM05D004728 ORTHO05D002375 7.5e-12 75.1 168 37.5
MD15G1377600 Malus domestica HOM05D004728 ORTHO05D002375 1.3e-11 74.3 158 34.8
Gorai.005G094700 Gossypium raimondii HOM05D004728 ORTHO05D002375 2.2e-11 73.6 141 39.0
Sabra02G0079700 Salix brachista HOM05D004728 ORTHO05D002375 2.2e-11 73.6 153 38.6
GSVIVG01009093001 Vitis vinifera HOM05D004728 ORTHO05D002375 2.2e-11 73.6 135 44.4
Haze_18251 Corylus avellana HOM05D004728 ORTHO05D002375 3.7e-11 72.8 136 41.9
FAN13G0425 Fragaria x ananassa HOM05D004728 ORTHO05D002375 8.3e-11 71.6 144 41.7
MD15G1317700 Malus domestica HOM05D004728 ORTHO05D002375 8.3e-11 71.6 153 39.2
FAN04G1034 Fragaria x ananassa HOM05D004728 ORTHO05D002375 1.1e-10 71.2 141 40.4
FvH4_5g36280 Fragaria vesca HOM05D004728 ORTHO05D002375 1.4e-10 70.9 140 40.7
Duzib093G1766 Durio zibethinus HOM05D004728 ORTHO05D002375 1.9e-10 70.5 104 51.0
Atru.chr13.1111 Acer truncatum HOM05D004728 ORTHO05D002375 4.1e-10 69.3 145 38.6
MSTRG.1387 Avicennia marina HOM05D004728 ORTHO05D002375 4.1e-10 69.3 137 41.6
Oeu045990.1 Olea europaea HOM05D004728 ORTHO05D002375 7.0e-10 68.6 188 35.1
COL.COLO4_11993 Corchorus olitorius HOM05D004728 ORTHO05D002375 9.2e-10 68.2 120 38.3
Duzib093G2113 Durio zibethinus HOM05D004728 ORTHO05D002375 9.2e-10 68.2 147 40.1
Thecc.08G100800 Theobroma cacao HOM05D004728 ORTHO05D002375 9.2e-10 68.2 144 44.4
Aqoxy476s002 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 1.2e-09 67.8 129 29.5
Aqoxy6G00703 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 1.2e-09 67.8 129 29.5
Duzib147G1195 Durio zibethinus HOM05D004728 ORTHO05D002375 4.6e-09 65.9 147 38.8
Gohir.D05G225800 Gossypium hirsutum HOM05D004728 ORTHO05D002375 4.6e-09 65.9 182 33.0
Duzib116G0314 Durio zibethinus HOM05D004728 ORTHO05D002375 7.8e-09 65.1 122 45.1
Gorai.009G233200 Gossypium raimondii HOM05D004728 ORTHO05D002375 7.8e-09 65.1 140 38.6
Gorai.009G233300 Gossypium raimondii HOM05D004728 ORTHO05D002375 1.0e-08 64.7 182 34.6
Migut.C01161 Erythranthe guttata HOM05D004728 ORTHO05D002375 1.3e-08 64.3 141 36.9
SGA_v2.0_scaffold48G17928 Striga asiatica HOM05D004728 ORTHO05D002375 2.3e-08 63.5 137 41.6
FAN08G2352 Fragaria x ananassa HOM05D004728 ORTHO05D002375 3.0e-08 63.2 95 48.4
CANSAT01G0157 Cannabis sativa HOM05D004728 ORTHO05D002375 3.9e-08 62.8 147 37.4
Rhsim06G0077100 Rhododendron simsii HOM05D004728 ORTHO05D002375 3.9e-08 62.8 173 34.7
Rhsim07G0205400 Rhododendron simsii HOM05D004728 ORTHO05D002375 3.9e-08 62.8 124 46.0
RcHm_v2.0_Chr7g0238181 Rosa chinensis HOM05D004728 ORTHO05D002375 5.0e-08 62.4 141 37.6
RcHm_v2.0_Chr7g0238201 Rosa chinensis HOM05D004728 ORTHO05D002375 6.6e-08 62.0 211 29.9
Duzib041G0412 Durio zibethinus HOM05D004728 ORTHO05D002375 8.6e-08 61.6 136 40.4
Eucgr.F00382 Eucalyptus grandis HOM05D004728 ORTHO05D002375 8.6e-08 61.6 102 43.1
Lsat_1_v5_gn_9_73441 Lactuca sativa HOM05D004728 ORTHO05D002375 1.1e-07 61.2 150 28.7
Gohir.A05G223100 Gossypium hirsutum HOM05D004728 ORTHO05D002375 1.5e-07 60.8 139 34.5
Gohir.D02G084100 Gossypium hirsutum HOM05D004728 ORTHO05D002375 1.5e-07 60.8 114 38.6
HanXRQChr09g0250741 Helianthus annuus HOM05D004728 ORTHO05D002375 1.5e-07 60.8 144 39.6
MSTRG.3754 Avicennia marina HOM05D004728 ORTHO05D002375 1.9e-07 60.5 134 38.8
Potri.002G101600 Populus trichocarpa HOM05D004728 ORTHO05D002375 1.9e-07 60.5 180 34.4
MSTRG.1389 Avicennia marina HOM05D004728 ORTHO05D002375 2.5e-07 60.1 171 38.6
RcHm_v2.0_Chr2g0112251 Rosa chinensis HOM05D004728 ORTHO05D002375 2.5e-07 60.1 138 37.7
SGA_v2.0_scaffold24G10482 Striga asiatica HOM05D004728 ORTHO05D002375 2.5e-07 60.1 153 37.3
FAN19G1066 Fragaria x ananassa HOM05D004728 ORTHO05D002375 3.3e-07 59.7 139 37.4
Lj4A728T44 Lonicera japonica HOM05D004728 ORTHO05D002375 3.3e-07 59.7 153 31.4
FAN26G1362 Fragaria x ananassa HOM05D004728 ORTHO05D002375 7.3e-07 58.5 137 37.2
FAN23G2235 Fragaria x ananassa HOM05D004728 ORTHO05D002375 1.2e-06 57.8 137 37.2
Gohir.D05G225700 Gossypium hirsutum HOM05D004728 ORTHO05D002375 1.2e-06 57.8 91 48.4
AUR62027821 Chenopodium quinoa HOM05D059013 ORTHO05D002375 1.6e-06 57.4 127 28.3
Prupe.1G524300 Prunus persica HOM05D004728 ORTHO05D002375 2.1e-06 57.0 115 28.7
ECA247G2878 Erigeron canadensis HOM05D004728 ORTHO05D002375 2.8e-06 56.6 133 35.3
PSO761G0222 Papaver somniferum HOM05D007310 ORTHO05D002375 2.8e-06 56.6 120 30.8
COL.COLO4_11997 Corchorus olitorius HOM05D004728 ORTHO05D002375 3.6e-06 56.2 139 38.8
FAN28G1290 Fragaria x ananassa HOM05D004728 ORTHO05D002375 3.6e-06 56.2 137 36.5
Prupe.6G194100 Prunus persica HOM05D004728 ORTHO05D002375 3.6e-06 56.2 91 50.5
SalBow8G1210 Salvia bowleyana HOM05D007310 ORTHO05D002375 3.6e-06 56.2 115 30.4
SGA_v2.0_scaffold52G18993 Striga asiatica HOM05D004728 ORTHO05D002375 3.6e-06 56.2 131 39.7
Migut.C01096 Erythranthe guttata HOM05D004728 ORTHO05D002375 4.7e-06 55.8 189 31.2
PSO761G0559 Papaver somniferum HOM05D015253 ORTHO05D002375 4.7e-06 55.8 177 27.7
Hund26995 Selenicereus undatus HOM05D004728 ORTHO05D002375 4.7e-06 55.8 152 37.5
Dinv24166 Davidia involucrata HOM05D007310 ORTHO05D002375 6.2e-06 55.5 117 36.8
Peaxi162Scf00299g00914 Petunia axillaris HOM05D007310 ORTHO05D002375 6.2e-06 55.5 118 31.4
FvH4_1g20180 Fragaria vesca HOM05D004728 ORTHO05D002375 8.1e-06 55.1 139 37.4
FvH4_1g20190 Fragaria vesca HOM05D004728 ORTHO05D002375 8.1e-06 55.1 146 38.4
FAN19G1373 Fragaria x ananassa HOM05D004728 ORTHO05D002375 8.1e-06 55.1 146 38.4


User provided reference genes

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