Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.9T6TW9 Arachis hypogaea HOM05D005541 ORTHO05D006875 2.1e-163 578.9 292 100.0
arahy.Tifrunner.gnm1.ann1.H1LUDS Arachis hypogaea HOM05D005541 ORTHO05D006875 4.0e-162 574.7 292 99.3
Lalb_Chr08g0233581 Lupinus albus HOM05D005541 ORTHO05D006875 1.3e-136 490.0 292 80.5
Medtr2g450740 Medicago truncatula HOM05D005541 ORTHO05D006875 3.8e-136 488.4 299 79.9
Lj6g0025347 Lotus japonicus HOM05D005541 ORTHO05D006875 8.4e-136 487.3 297 81.1
Ca_03100_v3 Cicer arietinum L. HOM05D005541 ORTHO05D006875 2.1e-134 482.6 299 81.3
Glyma.15G198100 Glycine max HOM05D005541 ORTHO05D006875 5.1e-133 478.0 291 80.4
Lalb_Chr11g0073101 Lupinus albus HOM05D005541 ORTHO05D006875 6.7e-133 477.6 292 78.8
Psat1g021320 Pisum sativum HOM05D005541 ORTHO05D006875 6.7e-133 477.6 295 80.0
VMungo1309G2820 Vigna mungo HOM05D005541 ORTHO05D006875 1.3e-131 473.4 275 82.5
Glyma.09G091600 Glycine max HOM05D005541 ORTHO05D006875 4.8e-131 471.5 291 79.7
Phvul.009G212200 Phaseolus vulgaris HOM05D005541 ORTHO05D006875 6.9e-130 467.6 294 78.2
Thecc.09G137600 Theobroma cacao HOM05D005541 ORTHO05D006875 8.2e-123 444.1 288 75.3
Ciclev10009016m.g Citrus clementina HOM05D005541 ORTHO05D006875 6.9e-122 441.0 288 75.7
Dinv36447 Davidia involucrata HOM05D005541 ORTHO05D006875 9.0e-122 440.7 264 79.2
Atru.chr7.2014 Acer truncatum HOM05D005541 ORTHO05D006875 2.2e-120 436.0 282 74.5
FvH4_1g02000 Fragaria vesca HOM05D005541 ORTHO05D006875 2.2e-120 436.0 288 72.9
RcHm_v2.0_Chr2g0087061 Rosa chinensis HOM05D005541 ORTHO05D006875 2.2e-120 436.0 287 72.8
TWI32G1342 Tripterygium wilfordii HOM05D005541 ORTHO05D006875 5.0e-120 434.9 284 74.3
GSVIVG01012859001 Vitis vinifera HOM05D005541 ORTHO05D006875 8.5e-120 434.1 283 73.9
FAN26G0160 Fragaria x ananassa HOM05D005541 ORTHO05D006875 4.2e-119 431.8 291 71.8
Gohir.A13G202000 Gossypium hirsutum HOM05D005541 ORTHO05D006875 4.2e-119 431.8 268 77.6
Cc06_g07640 Coffea canephora HOM05D005541 ORTHO05D006875 5.5e-119 431.4 280 74.6
CiPaw.04G177400 Carya illinoinensis HOM05D005541 ORTHO05D006875 1.6e-118 429.9 287 71.1
FAN28G0031 Fragaria x ananassa HOM05D005541 ORTHO05D006875 2.1e-118 429.5 288 71.5
Gohir.D13G207800 Gossypium hirsutum HOM05D005541 ORTHO05D006875 2.7e-118 429.1 268 76.5
TWI63G1467 Tripterygium wilfordii HOM05D005541 ORTHO05D006875 3.6e-118 428.7 286 72.4
Duzib168G0734 Durio zibethinus HOM05D005541 ORTHO05D006875 4.6e-118 428.3 267 74.9
Rhsim03G0253300 Rhododendron simsii HOM05D005541 ORTHO05D006875 4.6e-118 428.3 265 75.8
Gorai.013G236700 Gossypium raimondii HOM05D005541 ORTHO05D006875 6.1e-118 427.9 268 76.1
QL02p090804 Quercus lobata HOM05D005541 ORTHO05D006875 1.4e-117 426.8 286 70.6
TWI63G0008 Tripterygium wilfordii HOM05D005541 ORTHO05D006875 1.4e-117 426.8 286 72.0
Cfa002261 Carpinus fangiana HOM05D005541 ORTHO05D006875 1.8e-117 426.4 287 71.1
PGR142G4414 Punica granatum HOM05D005541 ORTHO05D006875 3.0e-117 425.6 289 69.9
Manes.14G119600 Manihot esculenta HOM05D005541 ORTHO05D006875 6.7e-117 424.5 286 71.7
vmacro06115 Vaccinium macrocarpon HOM05D005541 ORTHO05D006875 2.0e-116 422.9 244 79.1
Gorai.004G109500 Gossypium raimondii HOM05D005541 ORTHO05D006875 5.7e-116 421.4 268 75.0
Sabra06G0044200 Salix brachista HOM05D005541 ORTHO05D006875 2.8e-115 419.1 290 70.3
HanXRQChr03g0063361 Helianthus annuus HOM05D005541 ORTHO05D006875 4.8e-115 418.3 270 74.1
Potri.018G118200 Populus trichocarpa HOM05D005541 ORTHO05D006875 4.8e-115 418.3 290 68.6
Potri.006G061600 Populus trichocarpa HOM05D005541 ORTHO05D006875 3.1e-114 415.6 290 69.3
Gohir.A08G090600 Gossypium hirsutum HOM05D005541 ORTHO05D006875 4.1e-114 415.2 268 74.3
ClCG06G011880 Citrullus lanatus HOM05D005541 ORTHO05D006875 2.0e-113 412.9 283 70.0
Actinidia14228 Actinidia chinensis HOM05D005541 ORTHO05D006875 4.5e-113 411.8 261 75.9
Lsat_1_v5_gn_7_46800 Lactuca sativa HOM05D005541 ORTHO05D006875 4.5e-113 411.8 281 71.2
Migut.J01236 Erythranthe guttata HOM05D005541 ORTHO05D006875 5.9e-113 411.4 266 75.2
MD15G1162200 Malus domestica HOM05D005541 ORTHO05D006875 5.9e-113 411.4 288 69.4
MD02G1018200 Malus domestica HOM05D005541 ORTHO05D006875 1.3e-112 410.2 267 74.5
ECA240G1064 Erigeron canadensis HOM05D005541 ORTHO05D006875 5.0e-112 408.3 290 68.6
Aqoxy7G03592 Aquilegia oxysepala HOM05D005541 ORTHO05D006875 8.5e-112 407.5 269 71.4
Cpa.g.sc46.69 Carica papaya HOM05D005541 ORTHO05D006875 1.1e-111 407.1 287 70.7
Actinidia26358 Actinidia chinensis HOM05D005541 ORTHO05D006875 1.4e-111 406.8 245 77.6
HanXRQChr09g0241861 Helianthus annuus HOM05D005541 ORTHO05D006875 2.5e-111 406.0 264 73.5
Sed0021107 Sechium edule HOM05D005541 ORTHO05D006875 4.2e-111 405.2 283 68.6
Peaxi162Scf00088g00520 Petunia axillaris HOM05D005541 ORTHO05D006875 2.1e-110 402.9 253 74.3
CsaV3_1G028340 Cucumis sativus L. HOM05D005541 ORTHO05D006875 2.7e-110 402.5 282 69.1
SGA_v2.0_scaffold45G17077 Striga asiatica HOM05D005541 ORTHO05D006875 2.7e-110 402.5 264 74.6
Sopen07g003450 Solanum pennellii HOM05D005541 ORTHO05D006875 3.6e-110 402.1 255 73.7
Solyc07g007380.4 Solanum lycopersicum HOM05D005541 ORTHO05D006875 7.9e-110 401.0 255 73.7
Prupe.7G257600 Prunus persica HOM05D005541 ORTHO05D006875 1.0e-109 400.6 294 66.7
TAR100G0002 Trochodendron aralioides HOM05D005541 ORTHO05D006875 1.0e-109 400.6 259 73.4
TAR170G0003 Trochodendron aralioides HOM05D005541 ORTHO05D006875 1.0e-109 400.6 259 73.4
MELO3C010277.2 Cucumis melo HOM05D005541 ORTHO05D006875 1.8e-109 399.8 282 68.4
Sed0001591 Sechium edule HOM05D005541 ORTHO05D006875 2.3e-109 399.4 286 68.5
CANSAT11G2438 Cannabis sativa HOM05D005541 ORTHO05D006875 6.7e-109 397.9 286 67.5
Nn8g39653 Nelumbo nucifera HOM05D005541 ORTHO05D006875 2.6e-108 396.0 287 68.3
MSTRG.6077 Avicennia marina HOM05D005541 ORTHO05D006875 5.7e-108 394.8 263 73.8
Nitab4.5_0002286g0050 Nicotiana tabacum HOM05D005541 ORTHO05D006875 1.3e-107 393.7 252 72.6
Nitab4.5_0002845g0020 Nicotiana tabacum HOM05D005541 ORTHO05D006875 1.7e-107 393.3 286 66.1
Sc08g0006020 Simmondsia chinensis HOM05D005541 ORTHO05D006875 2.8e-107 392.5 252 71.4
PGSC0003DMG400030689 Solanum tuberosum HOM05D005541 ORTHO05D006875 6.3e-107 391.3 251 73.3
CAN.G1281.6 Capsicum annuum HOM05D005541 ORTHO05D006875 4.1e-106 388.7 252 72.6
Duzib187G1717 Durio zibethinus HOM05D005541 ORTHO05D006875 4.1e-106 388.7 222 81.5
AUR62011221 Chenopodium quinoa HOM05D005541 ORTHO05D006875 1.6e-105 386.7 285 66.3
Lj7A439T20 Lonicera japonica HOM05D005541 ORTHO05D006875 2.0e-105 386.3 231 78.8
DCAR_009345 Daucus carota HOM05D005541 ORTHO05D006875 2.6e-105 386.0 279 68.8
AUR62020012 Chenopodium quinoa HOM05D005541 ORTHO05D006875 1.0e-104 384.0 261 70.5
Dinv41444 Davidia involucrata HOM05D005541 ORTHO05D006875 3.8e-104 382.1 224 80.4
Oeu012222.1 Olea europaea HOM05D005541 ORTHO05D006875 5.5e-103 378.3 283 65.0
Gohir.D08G101500 Gossypium hirsutum HOM05D005541 ORTHO05D006875 6.7e-101 371.3 268 69.8
Hund09308 Selenicereus undatus HOM05D005541 ORTHO05D006875 7.5e-100 367.9 258 67.8
Gohir.D13G208000 Gossypium hirsutum HOM05D005541 ORTHO05D006875 6.3e-99 364.8 227 76.2
Haze_25444 Corylus avellana HOM05D005541 ORTHO05D006875 1.6e-97 360.1 254 68.9
COL.COLO4_33365 Corchorus olitorius HOM05D005541 ORTHO05D006875 1.0e-96 357.5 217 79.3
CSS0024399 Camellia sinensis var. sinensis HOM05D005541 ORTHO05D006875 1.5e-95 353.6 228 75.9
PSO478G5201 Papaver somniferum HOM05D005541 ORTHO05D006875 8.0e-94 347.8 287 59.6
THA.LOC104808948 Tarenaya hassleriana HOM05D005541 ORTHO05D006875 1.0e-93 347.4 284 58.1
THA.LOC104815290 Tarenaya hassleriana HOM05D005541 ORTHO05D006875 2.3e-93 346.3 258 63.2
MBI15_g25760_MAGBIO Magnolia biondii HOM05D005541 ORTHO05D006875 3.0e-93 345.9 372 48.9
Eucgr.C00480 Eucalyptus grandis HOM05D005541 ORTHO05D006875 8.8e-93 344.4 288 61.1
ATR0767G116 Amborella trichopoda HOM05D005541 ORTHO05D006875 1.5e-92 343.6 267 61.8
PSO017G3833 Papaver somniferum HOM05D005541 ORTHO05D006875 1.5e-92 343.6 287 59.6
Ah.09g224130 Amaranthus hybridus HOM05D005541 ORTHO05D006875 4.5e-89 332.0 224 69.2
HPP92_020539 Vanilla planifolia HOM05D005541 ORTHO05D006875 5.9e-89 331.6 266 58.6
CDE02G2611 Ceratophyllum demersum HOM05D005541 ORTHO05D006875 1.0e-88 330.9 258 60.9
EL10Ac8g18781 Beta vulgaris HOM05D005541 ORTHO05D006875 2.9e-88 329.3 231 67.5
AT5G35080 Arabidopsis thaliana HOM05D005541 ORTHO05D006875 9.5e-87 324.3 264 59.8
BcaB02g10581 Brassica carinata HOM05D005541 ORTHO05D006875 4.4e-84 315.5 264 58.0
BcaC02g11442 Brassica carinata HOM05D005541 ORTHO05D006875 1.3e-83 313.9 261 58.2
C04p15500 Brassica napus HOM05D005541 ORTHO05D006875 1.3e-83 313.9 261 58.2
BolC4t23121H Brassica oleracea HOM05D005541 ORTHO05D006875 1.3e-83 313.9 261 58.2
Carub.0007s3085 Capsella rubella HOM05D005541 ORTHO05D006875 6.3e-83 311.6 266 58.3
Sp4g15930 Schrenkiella parvula HOM05D005541 ORTHO05D006875 1.1e-82 310.8 257 58.4
BcaB01g03929 Brassica carinata HOM05D005541 ORTHO05D006875 1.8e-82 310.1 240 61.7
FAN19G0623 Fragaria x ananassa HOM05D005541 ORTHO05D006875 1.8e-82 310.1 208 71.6
BolC3t14579H Brassica oleracea HOM05D005541 ORTHO05D006875 3.1e-82 309.3 241 60.6
BraA05t20138Z Brassica rapa HOM05D005541 ORTHO05D006875 3.1e-82 309.3 259 57.5
Thhalv10002066m.g Eutrema salsugineum HOM05D005541 ORTHO05D006875 3.1e-82 309.3 259 57.5
A05p11950 Brassica napus HOM05D005541 ORTHO05D006875 4.1e-82 308.9 259 57.5
C03p21960 Brassica napus HOM05D005541 ORTHO05D006875 9.2e-82 307.8 241 60.6
Aa31LG10G11810 Aethionema arabicum HOM05D005541 ORTHO05D006875 4.5e-81 305.4 222 65.3
Actinidia38706 Actinidia chinensis HOM05D005541 ORTHO05D006875 7.3e-79 298.1 193 71.5
Oeu028018.1 Olea europaea HOM05D005541 ORTHO05D006875 5.7e-76 288.5 257 57.6
Pp3c2_6810 Physcomitrium patens HOM05D005541 ORTHO05D006875 7.5e-76 288.1 231 60.2
Zm00001eb028460 Zea mays HOM05D005541 ORTHO05D006875 4.9e-75 285.4 254 53.1
CARHR217140 Cardamine hirsuta HOM05D005541 ORTHO05D006875 2.0e-73 280.0 233 58.8
BcaC01g05834 Brassica carinata HOM05D005541 ORTHO05D006875 6.6e-72 275.0 230 57.0
Pp3c1_27810 Physcomitrium patens HOM05D005541 ORTHO05D006875 2.3e-69 266.5 231 57.1
Zm00001eb136970 Zea mays HOM05D005541 ORTHO05D006875 8.1e-62 241.5 224 52.2
Mapoly0020s0022 Marchantia polymorpha HOM05D005541 ORTHO05D006875 4.9e-59 232.3 275 48.0
SMO174G0227 Selaginella moellendorffii HOM05D005541 ORTHO05D006875 5.4e-58 228.8 231 49.8
unitig_0.g507 Utricularia gibba HOM05D005541 ORTHO05D006875 1.1e-55 221.1 150 69.3
AagrBONN_evm.TU.Sc2ySwM_228.2742 Anthoceros agrestis HOM05D005541 ORTHO05D006875 2.3e-53 213.4 236 46.2
Oeu028135.2 Olea europaea HOM05D005541 ORTHO05D006875 1.1e-50 204.5 189 58.2
CBR_g45403 Chara braunii HOM05D005541 ORTHO05D006875 3.4e-44 183.0 266 39.8
SEGI_36543 Sequoiadendron giganteum HOM05D005541 ORTHO05D006875 1.1e-42 177.9 121 68.6
Ca_27153_v3 Cicer arietinum L. HOM05D005541 ORTHO05D006875 2.2e-35 153.7 97 80.4
Os06g0644800 Oryza sativa ssp. japonica HOM05D005541 ORTHO05D006875 6.2e-30 135.6 115 51.3
MCO11G854 Micromonas commoda HOM05D005541 ORTHO05D006875 2.4e-29 133.7 212 34.4
Ca_24194_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.9e-23 114.0 100 61.0
RcHm_v2.0_Chr1g0314561 Rosa chinensis HOM05D005541 ORTHO05D006875 1.4e-21 107.8 74 66.2
Cre06.g257900 Chlamydomonas reinhardtii HOM05D005541 ORTHO05D006875 2.4e-21 107.1 159 38.4
PRCOL_00001292 Prasinoderma coloniale HOM05D005541 ORTHO05D006875 5.8e-20 102.4 142 37.3
RcHm_v2.0_Chr5g0069501 Rosa chinensis HOM05D005541 ORTHO05D006875 1.2e-17 94.7 62 71.0
HanXRQChr03g0068961 Helianthus annuus HOM05D005541 ORTHO05D006875 7.9e-17 92.0 49 89.8
RcHm_v2.0_Chr7g0241391 Rosa chinensis HOM05D005541 ORTHO05D006875 8.2e-14 82.0 43 81.4
unitig_0.g506 Utricularia gibba HOM05D001054 ORTHO05D007110 2.0e-12 77.4 79 50.6
FvH4_1g02060 Fragaria vesca HOM05D005541 ORTHO05D006875 7.2e-10 68.9 40 70.0


User provided reference genes

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