Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.9Q97AW Arachis hypogaea HOM05D004108 ORTHO05D004849 9.8e-51 203.4 118 100.0
arahy.Tifrunner.gnm1.ann1.FG8SZ8 Arachis hypogaea HOM05D004108 ORTHO05D004849 4.6e-48 194.5 118 94.9
Lalb_Chr08g0245901 Lupinus albus HOM05D004108 ORTHO05D004849 2.3e-23 112.5 134 48.5
TPR.G20143 Trifolium pratense HOM05D004108 ORTHO05D004849 4.3e-22 108.2 137 46.7
Medtr3g111970 Medicago truncatula HOM05D004108 ORTHO05D004849 2.1e-21 105.9 141 48.9
Glyma.17G251800 Glycine max HOM05D004108 ORTHO05D004849 3.6e-21 105.1 147 44.2
VMungo1309G0255 Vigna mungo HOM05D004108 ORTHO05D004849 3.6e-21 105.1 118 50.8
Glyma.14G073200 Glycine max HOM05D004108 ORTHO05D004849 8.1e-21 104.0 137 44.5
Glyma.04G030900 Glycine max HOM05D004108 ORTHO05D004849 1.8e-20 102.8 137 46.7
Glyma.06G031100 Glycine max HOM05D004108 ORTHO05D004849 3.1e-20 102.1 143 48.3
Medtr1g022395 Medicago truncatula HOM05D004108 ORTHO05D004849 4.0e-20 101.7 136 44.1
Psat6g008240 Pisum sativum HOM05D004108 ORTHO05D004849 4.0e-20 101.7 139 44.6
Sc15g0007040 Simmondsia chinensis HOM05D004108 ORTHO05D004849 4.0e-20 101.7 123 48.0
Ca_15505_v3 Cicer arietinum L. HOM05D004108 ORTHO05D004849 5.3e-20 101.3 138 45.7
MELO3C003817.2 Cucumis melo HOM05D004108 ORTHO05D004849 6.9e-20 100.9 146 41.8
Glyma.06G031000 Glycine max HOM05D004108 ORTHO05D004849 6.9e-20 100.9 148 45.3
Phvul.001G013200 Phaseolus vulgaris HOM05D004108 ORTHO05D004849 6.9e-20 100.9 137 43.8
Ca_13362_v3 Cicer arietinum L. HOM05D004108 ORTHO05D004849 9.0e-20 100.5 138 43.5
CsaV3_3G045320 Cucumis sativus L. HOM05D004108 ORTHO05D004849 1.2e-19 100.1 146 41.8
Lj5g0010725 Lotus japonicus HOM05D004108 ORTHO05D004849 1.5e-19 99.8 136 45.6
Psat5g012160 Pisum sativum HOM05D004108 ORTHO05D004849 2.0e-19 99.4 140 48.6
ATR0568G230 Amborella trichopoda HOM05D004108 ORTHO05D004849 7.6e-19 97.4 127 42.5
Thecc.08G029500 Theobroma cacao HOM05D004108 ORTHO05D004849 9.9e-19 97.1 141 41.8
Duzib093G0346 Durio zibethinus HOM05D004108 ORTHO05D004849 1.3e-18 96.7 148 40.5
Ciclev10002766m.g Citrus clementina HOM05D004108 ORTHO05D004849 2.2e-18 95.9 143 40.6
VMungo0647G0771 Vigna mungo HOM05D004108 ORTHO05D004849 2.2e-18 95.9 153 41.8
Sed0010517 Sechium edule HOM05D004108 ORTHO05D004849 2.9e-18 95.5 120 45.8
Eucgr.F01582 Eucalyptus grandis HOM05D004108 ORTHO05D004849 3.8e-18 95.1 124 46.8
Gohir.D01G103300 Gossypium hirsutum HOM05D004108 ORTHO05D004849 1.1e-17 93.6 143 41.3
MSTRG.24284 Avicennia marina HOM05D004108 ORTHO05D004849 1.4e-17 93.2 133 42.9
COL.COLO4_26289 Corchorus olitorius HOM05D004108 ORTHO05D004849 1.9e-17 92.8 151 41.1
Gorai.002G127100 Gossypium raimondii HOM05D004108 ORTHO05D004849 1.9e-17 92.8 143 41.3
Lj1g0012803 Lotus japonicus HOM05D004108 ORTHO05D004849 4.2e-17 91.7 146 41.8
HPP92_010562 Vanilla planifolia HOM05D004108 ORTHO05D004849 4.2e-17 91.7 109 46.8
Duzib116G0345 Durio zibethinus HOM05D004108 ORTHO05D004849 5.4e-17 91.3 142 39.4
Manes.18G023000 Manihot esculenta HOM05D004108 ORTHO05D004849 5.4e-17 91.3 151 39.7
QL02p009008 Quercus lobata HOM05D004108 ORTHO05D004849 5.4e-17 91.3 137 40.9
Phvul.009G058900 Phaseolus vulgaris HOM05D004108 ORTHO05D004849 7.1e-17 90.9 153 43.8
Sopen04g034130 Solanum pennellii HOM05D004108 ORTHO05D004849 7.1e-17 90.9 130 40.0
PGR083G0993 Punica granatum HOM05D004108 ORTHO05D004849 1.2e-16 90.1 129 40.3
PGSC0003DMG400003688 Solanum tuberosum HOM05D004108 ORTHO05D004849 1.2e-16 90.1 130 39.2
SGA_v2.0_scaffold326G48731 Striga asiatica HOM05D004108 ORTHO05D004849 2.1e-16 89.4 118 43.2
MSTRG.22304 Avicennia marina HOM05D004108 ORTHO05D004849 2.7e-16 89.0 138 39.1
EL10Ac1g00610 Beta vulgaris HOM05D004108 ORTHO05D004849 2.7e-16 89.0 133 36.8
Gohir.A05G192800 Gossypium hirsutum HOM05D004108 ORTHO05D004849 2.7e-16 89.0 150 39.3
Aqoxy3G01079 Aquilegia oxysepala HOM05D004108 ORTHO05D004849 3.5e-16 88.6 114 45.6
Cfa018174 Carpinus fangiana HOM05D004108 ORTHO05D004849 3.5e-16 88.6 138 40.6
Solyc04g080540.2 Solanum lycopersicum HOM05D004108 ORTHO05D004849 3.5e-16 88.6 130 39.2
Gohir.A05G258800 Gossypium hirsutum HOM05D004108 ORTHO05D004849 4.6e-16 88.2 146 41.1
Gorai.009G272400 Gossypium raimondii HOM05D004108 ORTHO05D004849 4.6e-16 88.2 144 41.0
Nitab4.5_0002224g0100 Nicotiana tabacum HOM05D004108 ORTHO05D004849 4.6e-16 88.2 135 38.5
Gohir.D05G196000 Gossypium hirsutum HOM05D004108 ORTHO05D004849 6.0e-16 87.8 150 39.3
Gorai.009G200900 Gossypium raimondii HOM05D004108 ORTHO05D004849 6.0e-16 87.8 150 39.3
Gohir.A01G114900 Gossypium hirsutum HOM05D004108 ORTHO05D004849 1.0e-15 87.0 143 39.9
Rhsim07G0240700 Rhododendron simsii HOM05D004108 ORTHO05D004849 1.0e-15 87.0 136 38.2
RhsimUnG0051600 Rhododendron simsii HOM05D004108 ORTHO05D004849 1.0e-15 87.0 136 38.2
THA.LOC104811375 Tarenaya hassleriana HOM05D004108 ORTHO05D004849 1.3e-15 86.7 120 45.0
Atru.chr13.446 Acer truncatum HOM05D004108 ORTHO05D004849 1.8e-15 86.3 140 39.3
Gohir.D05G260600 Gossypium hirsutum HOM05D004108 ORTHO05D004849 1.8e-15 86.3 146 40.4
Sabra05G0176500 Salix brachista HOM05D004108 ORTHO05D004849 1.8e-15 86.3 146 40.4
CANSAT25G0460 Cannabis sativa HOM05D004108 ORTHO05D004849 2.3e-15 85.9 136 41.2
CiPaw.15G080700 Carya illinoinensis HOM05D004108 ORTHO05D004849 2.3e-15 85.9 140 36.4
FAN15G0289 Fragaria x ananassa HOM05D004108 ORTHO05D004849 2.3e-15 85.9 159 35.2
TPR.G12369 Trifolium pratense HOM05D004108 ORTHO05D004849 2.3e-15 85.9 157 39.5
BcaC05g25839 Brassica carinata HOM05D004108 ORTHO05D004849 3.9e-15 85.1 114 43.9
A06p15710 Brassica napus HOM05D004108 ORTHO05D004849 3.9e-15 85.1 114 43.9
C05p18030 Brassica napus HOM05D004108 ORTHO05D004849 3.9e-15 85.1 117 43.6
BolC5t30510H Brassica oleracea HOM05D004108 ORTHO05D004849 3.9e-15 85.1 114 43.9
AUR62003937 Chenopodium quinoa HOM05D004108 ORTHO05D004849 3.9e-15 85.1 140 39.3
AUR62014478 Chenopodium quinoa HOM05D004108 ORTHO05D004849 3.9e-15 85.1 140 39.3
Migut.N00486 Erythranthe guttata HOM05D004108 ORTHO05D004849 3.9e-15 85.1 114 41.2
FAN27G1128 Fragaria x ananassa HOM05D004108 ORTHO05D004849 3.9e-15 85.1 159 34.6
Cc10_g02670 Coffea canephora HOM05D004108 ORTHO05D004849 5.1e-15 84.7 139 40.3
MBI18_g38882_MAGBIO Magnolia biondii HOM05D004108 ORTHO05D004849 5.1e-15 84.7 134 38.1
Potri.005G228600 Populus trichocarpa HOM05D004108 ORTHO05D004849 5.1e-15 84.7 147 38.1
Hund26890 Selenicereus undatus HOM05D004108 ORTHO05D004849 5.1e-15 84.7 127 38.6
Hund29908 Selenicereus undatus HOM05D004108 ORTHO05D004849 5.1e-15 84.7 127 38.6
TWI56G1092 Tripterygium wilfordii HOM05D004108 ORTHO05D004849 5.1e-15 84.7 144 36.8
Prupe.1G377400 Prunus persica HOM05D004108 ORTHO05D004849 6.7e-15 84.3 120 42.5
GSVIVG01009730001 Vitis vinifera HOM05D004108 ORTHO05D004849 6.7e-15 84.3 139 37.4
Sp1g17400 Schrenkiella parvula HOM05D004108 ORTHO05D004849 1.1e-14 83.6 118 42.4
BcaB07g31980 Brassica carinata HOM05D004108 ORTHO05D004849 1.5e-14 83.2 114 43.9
Sed0024175 Sechium edule HOM05D004108 ORTHO05D004849 1.5e-14 83.2 142 34.5
BraA06t24680Z Brassica rapa HOM05D004108 ORTHO05D004849 1.9e-14 82.8 109 44.0
FAN20G2373 Fragaria x ananassa HOM05D004108 ORTHO05D004849 4.3e-14 81.6 161 32.9
Thhalv10009139m.g Eutrema salsugineum HOM05D004108 ORTHO05D004849 5.6e-14 81.3 119 42.0
ClCG08G014950 Citrullus lanatus HOM05D004108 ORTHO05D004849 7.4e-14 80.9 148 36.5
Eucgr.F01583 Eucalyptus grandis HOM05D004108 ORTHO05D004849 7.4e-14 80.9 155 39.4
CARHR020100 Cardamine hirsuta HOM05D004108 ORTHO05D004849 9.6e-14 80.5 118 40.7
Lalb_Chr14g0369381 Lupinus albus HOM05D004108 ORTHO05D004849 9.6e-14 80.5 134 41.0
Oeu007023.1 Olea europaea HOM05D004108 ORTHO05D004849 9.6e-14 80.5 147 38.1
AT1G19530 Arabidopsis thaliana HOM05D004108 ORTHO05D004849 1.6e-13 79.7 120 42.5
CsaV3_2G028830 Cucumis sativus L. HOM05D004108 ORTHO05D004849 1.6e-13 79.7 149 36.2
Lsat_1_v5_gn_4_117601 Lactuca sativa HOM05D004108 ORTHO05D004849 1.6e-13 79.7 122 42.6
Rhsim06G0031200 Rhododendron simsii HOM05D004108 ORTHO05D004849 1.6e-13 79.7 146 37.0
Aqoxy3G01077 Aquilegia oxysepala HOM05D004108 ORTHO05D004849 2.8e-13 79.0 123 39.8
CSS0043508 Camellia sinensis var. sinensis HOM05D004108 ORTHO05D004849 2.8e-13 79.0 143 35.7
ECA232G2533 Erigeron canadensis HOM05D004108 ORTHO05D004849 2.8e-13 79.0 122 36.9
unitig_899.g15617 Utricularia gibba HOM05D004108 ORTHO05D004849 2.8e-13 79.0 133 42.1
DCAR_019539 Daucus carota HOM05D001676 ORTHO05D001539 3.7e-13 78.6 140 36.4
FvH4_2g39630 Fragaria vesca HOM05D004108 ORTHO05D004849 3.7e-13 78.6 160 33.8
CSS0044578 Camellia sinensis var. sinensis HOM05D004108 ORTHO05D004849 6.2e-13 77.8 143 35.7
Carub.0001s1910 Capsella rubella HOM05D004108 ORTHO05D004849 6.2e-13 77.8 119 39.5
Potri.002G034500 Populus trichocarpa HOM05D004108 ORTHO05D004849 6.2e-13 77.8 138 37.0
MD08G1029700 Malus domestica HOM05D004108 ORTHO05D004849 1.1e-12 77.0 123 39.8
Sabra02G0027700 Salix brachista HOM05D004108 ORTHO05D004849 1.4e-12 76.6 129 37.2
HPP92_003110 Vanilla planifolia HOM05D004108 ORTHO05D004849 1.4e-12 76.6 137 34.3
AL1G32280 Arabidopsis lyrata HOM05D004108 ORTHO05D004849 1.8e-12 76.3 120 40.0
MELO3C010952.2 Cucumis melo HOM05D004108 ORTHO05D004849 1.8e-12 76.3 135 35.6
HanXRQChr05g0156841 Helianthus annuus HOM05D004108 ORTHO05D004849 1.8e-12 76.3 134 33.6
Hma1.2p1_0203F.1_g086230 Hydrangea macrophylla HOM05D004108 ORTHO05D004849 1.8e-12 76.3 143 38.5
Aqoxy5G01593 Aquilegia oxysepala HOM05D004108 ORTHO05D004849 4.0e-12 75.1 146 37.0
RcHm_v2.0_Chr6g0301271 Rosa chinensis HOM05D004108 ORTHO05D004849 4.0e-12 75.1 152 36.2
Haze_17929 Corylus avellana HOM05D004108 ORTHO05D004849 5.3e-12 74.7 121 38.0
Actinidia22531 Actinidia chinensis HOM05D004108 ORTHO05D004849 9.0e-12 73.9 138 35.5
TAR381G0780 Trochodendron aralioides HOM05D004108 ORTHO05D004849 1.2e-11 73.6 114 36.8
CANSAT25G1850 Cannabis sativa HOM05D004108 ORTHO05D004849 3.4e-11 72.0 144 35.4
ECA246G2053 Erigeron canadensis HOM05D004108 ORTHO05D004849 3.4e-11 72.0 140 33.6
Lsat_1_v5_gn_5_27881 Lactuca sativa HOM05D004108 ORTHO05D004849 3.4e-11 72.0 134 35.8
Os03g0826800 Oryza sativa ssp. japonica HOM05D004108 ORTHO05D004849 4.5e-11 71.6 142 34.5
PSO675G8146 Papaver somniferum HOM05D004108 ORTHO05D004849 5.8e-11 71.2 141 35.5
Mapoly0203s0009 Marchantia polymorpha HOM05D004108 ORTHO05D004849 7.6e-11 70.9 117 34.2
Phvul.009G058800 Phaseolus vulgaris HOM05D004108 ORTHO05D004849 7.6e-11 70.9 126 38.9
AagrBONN_evm.TU.Sc2ySwM_344.1816 Anthoceros agrestis HOM05D004108 ORTHO05D004849 1.7e-10 69.7 155 34.8
Mapoly0085s0006 Marchantia polymorpha HOM05D004108 ORTHO05D004849 1.7e-10 69.7 126 33.3
unitig_747.g21673 Utricularia gibba HOM05D004108 ORTHO05D004849 2.2e-10 69.3 114 55.3
CDE02G0765 Ceratophyllum demersum HOM05D004108 ORTHO05D004849 3.8e-10 68.6 148 31.1
PSO541G2330 Papaver somniferum HOM05D004108 ORTHO05D004849 3.8e-10 68.6 136 31.6
CDE11G1036 Ceratophyllum demersum HOM05D004108 ORTHO05D004849 8.4e-10 67.4 135 40.0
Cpa.g.sc31.39 Carica papaya HOM05D004108 ORTHO05D004849 1.4e-09 66.6 104 37.5
ClCG05G018840 Citrullus lanatus HOM05D004108 ORTHO05D004849 2.4e-09 65.9 41 70.7
Mapoly0212s0007 Marchantia polymorpha HOM05D004108 ORTHO05D004849 4.2e-09 65.1 142 31.0
Aa31LG7G4180 Aethionema arabicum HOM05D004108 ORTHO05D004849 7.1e-09 64.3 116 37.9
CDE05G3574 Ceratophyllum demersum HOM05D004108 ORTHO05D004849 7.1e-09 64.3 134 34.3
Rhsim06G0031500 Rhododendron simsii HOM05D004108 ORTHO05D004849 9.3e-09 63.9 117 35.9
HanXRQChr16g0501561 Helianthus annuus HOM05D004108 ORTHO05D004849 1.2e-08 63.5 123 35.8
Nitab4.5_0001759g0080 Nicotiana tabacum HOM05D004108 ORTHO05D004849 2.7e-08 62.4 41 68.3
Nn2g14293 Nelumbo nucifera HOM05D004108 ORTHO05D004849 3.5e-08 62.0 103 36.9
Dinv36099 Davidia involucrata HOM05D004108 ORTHO05D004849 1.0e-07 60.5 106 34.0
Pp3c16_7660 Physcomitrium patens HOM05D004108 ORTHO05D004849 1.3e-07 60.1 120 33.3
Mapoly0085s0007 Marchantia polymorpha HOM05D004108 ORTHO05D004849 1.8e-07 59.7 131 28.2
Mapoly0212s0008 Marchantia polymorpha HOM05D004108 ORTHO05D004849 1.8e-07 59.7 133 31.6
Actinidia38001 Actinidia chinensis HOM05D004108 ORTHO05D004849 2.3e-07 59.3 40 67.5
Mapoly0212s0009 Marchantia polymorpha HOM05D004108 ORTHO05D004849 3.0e-07 58.9 142 31.0
Sc02g0005700 Simmondsia chinensis HOM05D004108 ORTHO05D004849 3.9e-07 58.5 40 65.0
DCAR_020978 Daucus carota HOM05D004108 ORTHO05D004849 6.7e-07 57.8 112 33.0
SEGI_15325 Sequoiadendron giganteum HOM05D004108 ORTHO05D004849 6.7e-07 57.8 146 28.1
Mapoly0152s0035 Marchantia polymorpha HOM05D004108 ORTHO05D004849 8.7e-07 57.4 140 28.6
Actinidia29817 Actinidia chinensis HOM05D004108 ORTHO05D004849 1.9e-06 56.2 40 62.5
PGSC0003DMG400005376 Solanum tuberosum HOM05D004108 ORTHO05D004849 2.5e-06 55.8 39 66.7
MBI10_g18267_MAGBIO Magnolia biondii HOM05D004108 ORTHO05D004849 3.3e-06 55.5 134 31.3
SMO348G0043 Selaginella moellendorffii HOM05D004108 ORTHO05D004849 3.3e-06 55.5 153 30.7
SEGI_02312 Sequoiadendron giganteum HOM05D004108 ORTHO05D004849 3.3e-06 55.5 151 27.2
CDE06G1682 Ceratophyllum demersum HOM05D004108 ORTHO05D004849 5.6e-06 54.7 39 59.0
CSS0033768 Camellia sinensis var. sinensis HOM05D004108 ORTHO05D004849 9.6e-06 53.9 41 58.5


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