Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.9PSP05 Arachis hypogaea HOM05D001343 ORTHO05D007223 4.2e-102 374.8 202 100.0
arahy.Tifrunner.gnm1.ann1.AU9Y8G Arachis hypogaea HOM05D001343 ORTHO05D007223 4.6e-56 221.9 197 69.0
arahy.Tifrunner.gnm1.ann1.SLQH96 Arachis hypogaea HOM05D001343 ORTHO05D007223 4.6e-56 221.9 197 69.0
Lj2g0004784 Lotus japonicus HOM05D001343 ORTHO05D007223 3.1e-44 182.6 166 65.1
Phvul.002G114800 Phaseolus vulgaris HOM05D001343 ORTHO05D007223 4.0e-44 182.2 166 66.9
TPR.G25095 Trifolium pratense HOM05D001343 ORTHO05D007223 2.0e-43 179.9 165 64.2
VMungo1215G1031 Vigna mungo HOM05D001343 ORTHO05D007223 2.6e-43 179.5 165 65.5
Psat2g150480 Pisum sativum HOM05D001343 ORTHO05D007223 9.9e-43 177.6 165 63.0
Lalb_Chr05g0211921 Lupinus albus HOM05D001343 ORTHO05D007223 3.8e-42 175.6 165 64.2
Medtr5g023770 Medicago truncatula HOM05D001343 ORTHO05D007223 3.8e-42 175.6 165 62.4
FAN19G1061 Fragaria x ananassa HOM05D001343 ORTHO05D007223 1.6e-40 170.2 166 62.0
Prupe.7G179600 Prunus persica HOM05D001343 ORTHO05D007223 6.0e-40 168.3 166 60.8
FvH4_1g10521 Fragaria vesca HOM05D001343 ORTHO05D007223 1.3e-39 167.2 166 61.4
MD02G1119300 Malus domestica HOM05D001343 ORTHO05D007223 1.7e-39 166.8 166 60.8
Haze_03675 Corylus avellana HOM05D001343 ORTHO05D007223 2.3e-39 166.4 166 60.2
FAN23G1852 Fragaria x ananassa HOM05D001343 ORTHO05D007223 3.9e-39 165.6 166 61.4
CiPaw.07G004100 Carya illinoinensis HOM05D001343 ORTHO05D007223 5.1e-39 165.2 166 61.4
FAN28G2189 Fragaria x ananassa HOM05D001343 ORTHO05D007223 1.1e-38 164.1 166 60.8
Glyma.11G084200 Glycine max HOM05D001343 ORTHO05D007223 1.9e-38 163.3 166 61.4
MD15G1233300 Malus domestica HOM05D001343 ORTHO05D007223 4.3e-38 162.2 166 59.6
ClCG10G000340 Citrullus lanatus HOM05D001343 ORTHO05D007223 5.6e-38 161.8 180 57.8
QL06p052741 Quercus lobata HOM05D001343 ORTHO05D007223 1.3e-37 160.6 166 60.2
QL06p053829 Quercus lobata HOM05D001343 ORTHO05D007223 2.1e-37 159.8 165 59.4
Dinv40173 Davidia involucrata HOM05D001343 ORTHO05D007223 8.1e-37 157.9 186 54.8
CsaV3_3G000380 Cucumis sativus L. HOM05D001343 ORTHO05D007223 1.4e-36 157.1 166 59.6
CANSAT25G1453 Cannabis sativa HOM05D001343 ORTHO05D007223 2.4e-36 156.4 166 59.0
Potri.005G099800 Populus trichocarpa HOM05D001343 ORTHO05D007223 4.0e-36 155.6 166 57.8
Ciclev10024922m.g Citrus clementina HOM05D001343 ORTHO05D007223 5.3e-36 155.2 167 58.1
CANSAT25G0854 Cannabis sativa HOM05D001343 ORTHO05D007223 6.9e-36 154.8 166 58.4
Sed0023593 Sechium edule HOM05D001343 ORTHO05D007223 6.9e-36 154.8 166 57.8
Sabra05G0082500 Salix brachista HOM05D001343 ORTHO05D007223 2.0e-35 153.3 166 57.2
Manes.02G112700 Manihot esculenta HOM05D001343 ORTHO05D007223 5.8e-35 151.8 167 57.5
SalBow5G5069 Salvia bowleyana HOM05D001343 ORTHO05D007223 5.8e-35 151.8 183 54.1
Dinv08526 Davidia involucrata HOM05D001343 ORTHO05D007223 9.9e-35 151.0 166 57.8
RcHm_v2.0_Chr2g0097451 Rosa chinensis HOM05D001343 ORTHO05D007223 9.9e-35 151.0 154 59.7
Duzib187G0329 Durio zibethinus HOM05D001343 ORTHO05D007223 2.9e-34 149.4 169 56.8
THA.LOC104826465 Tarenaya hassleriana HOM05D001343 ORTHO05D007223 2.9e-34 149.4 166 56.0
Carub.0008s2848 Capsella rubella HOM05D001343 ORTHO05D007223 3.8e-34 149.1 181 52.5
CARHR281730 Cardamine hirsuta HOM05D001343 ORTHO05D007223 3.8e-34 149.1 184 52.7
vmacro20524 Vaccinium macrocarpon HOM05D001343 ORTHO05D007223 3.8e-34 149.1 183 53.6
BcaB04g20130 Brassica carinata HOM05D001343 ORTHO05D002008 8.4e-34 147.9 184 53.3
BcaC04g23105 Brassica carinata HOM05D001343 ORTHO05D002008 1.9e-33 146.7 184 53.3
A09p10220 Brassica napus HOM05D001343 ORTHO05D002008 1.9e-33 146.7 184 53.3
C09p12110 Brassica napus HOM05D001343 ORTHO05D002008 1.9e-33 146.7 184 53.3
Glyma.01G159900 Glycine max HOM05D001343 ORTHO05D007223 1.9e-33 146.7 165 55.8
Hma1.2p1_0300F.1_g118160 Hydrangea macrophylla HOM05D001343 ORTHO05D007223 3.2e-33 146.0 179 55.3
GSVIVG01003839001 Vitis vinifera HOM05D001343 ORTHO05D007223 5.4e-33 145.2 166 54.8
Thecc.01G007100 Theobroma cacao HOM05D001343 ORTHO05D007223 9.3e-33 144.4 184 52.7
Actinidia17384 Actinidia chinensis HOM05D001343 ORTHO05D007223 2.1e-32 143.3 166 56.0
BraA09t36667Z Brassica rapa HOM05D001343 ORTHO05D002008 2.1e-32 143.3 191 51.8
Solyc02g082840.3 Solanum lycopersicum HOM05D001343 ORTHO05D007223 2.7e-32 142.9 185 53.5
Sopen02g027640 Solanum pennellii HOM05D001343 ORTHO05D007223 2.7e-32 142.9 185 53.5
Atru.chr3.956 Acer truncatum HOM05D001343 ORTHO05D007223 3.5e-32 142.5 169 52.1
BolC9t54101H Brassica oleracea HOM05D001343 ORTHO05D002008 3.5e-32 142.5 191 51.8
PSO210G1702 Papaver somniferum HOM05D001343 ORTHO05D007223 4.6e-32 142.1 166 57.2
MSTRG.15594 Avicennia marina HOM05D001343 ORTHO05D007223 7.8e-32 141.4 166 54.8
arahy.Tifrunner.gnm1.ann1.ISY8LN Arachis hypogaea HOM05D001343 ORTHO05D007223 1.0e-31 141.0 174 55.7
Gohir.D10G089000 Gossypium hirsutum HOM05D001343 ORTHO05D007223 1.0e-31 141.0 166 54.2
Gorai.011G097900 Gossypium raimondii HOM05D001343 ORTHO05D007223 1.0e-31 141.0 166 54.2
COL.COLO4_22537 Corchorus olitorius HOM05D001343 ORTHO05D007223 1.3e-31 140.6 184 51.6
TWI09G1271 Tripterygium wilfordii HOM05D001343 ORTHO05D007223 1.3e-31 140.6 165 54.5
Duzib147G0638 Durio zibethinus HOM05D001343 ORTHO05D007223 1.7e-31 140.2 166 55.4
PSO170G3735 Papaver somniferum HOM05D001343 ORTHO05D007223 2.3e-31 139.8 166 56.6
Gohir.A10G099100 Gossypium hirsutum HOM05D001343 ORTHO05D007223 3.9e-31 139.0 166 53.6
PGR083G0487 Punica granatum HOM05D001343 ORTHO05D007223 6.6e-31 138.3 166 55.4
TAR381G1734 Trochodendron aralioides HOM05D001343 ORTHO05D007223 6.6e-31 138.3 200 49.0
HanXRQChr14g0442391 Helianthus annuus HOM05D001343 ORTHO05D007223 1.9e-30 136.7 165 52.1
Aqoxy5G01035 Aquilegia oxysepala HOM05D001343 ORTHO05D007223 3.3e-30 136.0 164 53.0
Sp2g30660 Schrenkiella parvula HOM05D001343 ORTHO05D007223 7.3e-30 134.8 184 50.0
Ca_24963_v3 Cicer arietinum L. HOM05D001343 ORTHO05D007223 9.6e-30 134.4 186 50.5
Nn5g30956 Nelumbo nucifera HOM05D001343 ORTHO05D007223 1.3e-29 134.0 200 49.0
Hund03615 Selenicereus undatus HOM05D001343 ORTHO05D007223 1.6e-29 133.7 165 52.1
SGA_v2.0_scaffold12G05990 Striga asiatica HOM05D001343 ORTHO05D007223 2.8e-29 132.9 165 52.1
ATR0661G538 Amborella trichopoda HOM05D001343 ORTHO05D007223 1.8e-28 130.2 187 48.1
Migut.L00734 Erythranthe guttata HOM05D001343 ORTHO05D007223 1.8e-28 130.2 203 47.3
arahy.Tifrunner.gnm1.ann1.T78FCF Arachis hypogaea HOM05D001343 ORTHO05D007223 2.4e-28 129.8 74 93.2
CAN.G890.76 Capsicum annuum HOM05D001343 ORTHO05D007223 2.4e-28 129.8 166 54.2
AT5G66030 Arabidopsis thaliana HOM05D001343 ORTHO05D007223 4.0e-28 129.0 191 48.2
Zm00001eb104860 Zea mays HOM05D001343 ORTHO05D007223 4.0e-28 129.0 166 50.6
Lj4A232G45 Lonicera japonica HOM05D001343 ORTHO05D007223 5.3e-28 128.6 166 50.6
Manes.01G153700 Manihot esculenta HOM05D001343 ORTHO05D007223 2.0e-27 126.7 162 51.9
Eucgr.J02528 Eucalyptus grandis HOM05D001343 ORTHO05D007223 3.4e-27 125.9 169 50.3
Os07g0472500 Oryza sativa ssp. japonica HOM05D001343 ORTHO05D007223 5.8e-27 125.2 166 50.0
Thhalv10003686m.g Eutrema salsugineum HOM05D001343 ORTHO05D007223 9.9e-27 124.4 184 48.4
AL8G45590 Arabidopsis lyrata HOM05D001343 ORTHO05D007223 1.7e-26 123.6 173 49.7
CSS0043948 Camellia sinensis var. sinensis HOM05D001343 ORTHO05D007223 4.9e-26 122.1 156 53.2
CDE07G1064 Ceratophyllum demersum HOM05D001343 ORTHO05D007223 3.2e-25 119.4 166 50.6
CDE06G1375 Ceratophyllum demersum HOM05D001343 ORTHO05D007223 4.2e-25 119.0 166 50.0
EL10Ac6g15468 Beta vulgaris HOM05D001343 ORTHO05D007223 7.1e-25 118.2 162 51.2
Cc07_g11650 Coffea canephora HOM05D001343 ORTHO05D007223 9.3e-25 117.9 186 46.2
ECA238G2213 Erigeron canadensis HOM05D001343 ORTHO05D007223 3.5e-24 115.9 185 44.3
SEGI_12448 Sequoiadendron giganteum HOM05D001343 ORTHO05D007223 4.6e-24 115.5 166 49.4
HPP92_003502 Vanilla planifolia HOM05D001343 ORTHO05D007223 7.9e-24 114.8 189 45.5
Nitab4.5_0000702g0060 Nicotiana tabacum HOM05D001343 ORTHO05D007223 7.4e-22 108.2 165 46.7
Nitab4.5_0002967g0060 Nicotiana tabacum HOM05D001343 ORTHO05D007223 7.4e-22 108.2 165 46.7
MELO3C013733.2 Cucumis melo HOM05D001343 ORTHO05D007223 1.6e-21 107.1 111 62.2
DCAR_011583 Daucus carota HOM05D001343 ORTHO05D007223 2.1e-21 106.7 199 40.7
Cpa.g.sc55.186 Carica papaya HOM05D001343 ORTHO05D007223 2.8e-21 106.3 166 46.4
RcHm_v2.0_Chr2g0097571 Rosa chinensis HOM05D001343 ORTHO05D007223 5.3e-20 102.1 125 52.8
AUR62003379 Chenopodium quinoa HOM05D001343 ORTHO05D007223 6.9e-20 101.7 156 46.2
Mapoly0179s0009 Marchantia polymorpha HOM05D001343 ORTHO05D007223 1.5e-19 100.5 184 39.7
Peaxi162Scf01446g00025 Petunia axillaris HOM05D001343 ORTHO05D007223 5.8e-19 98.6 170 44.1
arahy.Tifrunner.gnm1.ann1.QS1PDB Arachis hypogaea HOM05D001343 ORTHO05D007223 1.7e-18 97.1 81 66.7
Lsat_1_v5_gn_2_74420 Lactuca sativa HOM05D001343 ORTHO05D007223 1.7e-18 97.1 168 44.0
Sc16g0001690 Simmondsia chinensis HOM05D001343 ORTHO05D007223 1.4e-17 94.0 168 42.3
unitig_88.g27773 Utricularia gibba HOM05D001343 ORTHO05D007223 7.1e-17 91.7 161 42.9
Atru.chr3.968 Acer truncatum HOM05D001343 ORTHO05D007223 3.5e-16 89.4 169 39.1
AUR62029449 Chenopodium quinoa HOM05D001343 ORTHO05D007223 4.6e-16 89.0 163 41.7
Pp3c23_9770 Physcomitrium patens HOM05D001343 ORTHO05D007223 6.0e-16 88.6 174 39.7
Migut.L00811 Erythranthe guttata HOM05D001343 ORTHO05D007223 1.3e-15 87.4 71 70.4
Ah.03g148390 Amaranthus hybridus HOM05D001343 ORTHO05D007223 2.3e-15 86.7 202 36.1
AagrBONN_evm.TU.Sc2ySwM_344.163 Anthoceros agrestis HOM05D001343 ORTHO05D007223 2.3e-15 86.7 166 42.8
QL06p053793 Quercus lobata HOM05D001343 ORTHO05D007223 3.9e-15 85.9 77 70.1
QL06p052753 Quercus lobata HOM05D003687 ORTHO05D007223 2.1e-13 80.1 53 77.4
Actinidia22910 Actinidia chinensis HOM05D001343 ORTHO05D007223 4.8e-13 79.0 117 49.6
Rhsim10G0198000 Rhododendron simsii HOM05D001343 ORTHO05D007223 1.5e-11 73.9 174 39.7
Pp3c20_18210 Physcomitrium patens HOM05D001343 ORTHO05D007223 4.5e-11 72.4 174 34.5
CBR_g34809 Chara braunii HOM05D000019 ORTHO05D000002 5.8e-11 72.0 177 39.0
arahy.Tifrunner.gnm1.ann1.55UCKQ Arachis hypogaea HOM05D050568 ORTHO05D007223 3.8e-10 69.3 69 60.9
arahy.Tifrunner.gnm1.ann1.6P6C0I Arachis hypogaea HOM05D001343 ORTHO05D007223 2.5e-09 66.6 77 58.4
HPP92_003508 Vanilla planifolia HOM05D001343 ORTHO05D007223 5.5e-09 65.5 55 72.7
QL06p052765 Quercus lobata HOM05D000009 ORTHO05D000008 5.1e-07 58.9 45 62.2
Lsat_1_v5_gn_4_84780 Lactuca sativa HOM05D003172 ORTHO05D007223 7.4e-06 55.1 40 72.5
QL06p052757 Quercus lobata HOM05D003687 ORTHO05D004571 7.4e-06 55.1 67 47.8


User provided reference genes

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