Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.9KKX2T Arachis hypogaea HOM05D012459 ORTHO05D010844 7.4e-268 926.8 516 100.0
arahy.Tifrunner.gnm1.ann1.UJV3YP Arachis hypogaea HOM05D012459 ORTHO05D010844 4.6e-246 854.4 523 92.4
TPR.G28364 Trifolium pratense HOM05D012459 ORTHO05D010844 1.7e-70 271.2 614 37.9
Lj2g0023112 Lotus japonicus HOM05D012459 ORTHO05D010844 1.9e-69 267.7 666 36.8
Psat0s4832g0040 Pisum sativum HOM05D012459 ORTHO05D010844 1.3e-67 261.5 604 38.2
Ca_25366_v3 Cicer arietinum L. HOM05D012459 ORTHO05D010844 2.5e-66 257.3 612 40.7
Lalb_Chr19g0134401 Lupinus albus HOM05D012459 ORTHO05D010844 8.9e-64 248.8 610 36.6
Medtr6g078430 Medicago truncatula HOM05D012459 ORTHO05D010844 1.0e-59 235.3 601 36.1
Glyma.16G211200 Glycine max HOM05D012459 ORTHO05D010844 8.1e-57 225.7 597 34.7
Glyma.16G211400 Glycine max HOM05D000005 ORTHO05D010844 1.4e-56 224.9 597 34.7
Glyma.09G162200 Glycine max HOM05D012459 ORTHO05D010844 1.4e-53 214.9 590 34.7
Phvul.004G137400 Phaseolus vulgaris HOM05D012459 ORTHO05D010844 5.1e-51 206.5 602 34.1
VMungo0464G0894 Vigna mungo HOM05D000005 ORTHO05D012186 5.1e-43 179.9 570 35.6
Lalb_Chr17g0336721 Lupinus albus HOM05D012459 ORTHO05D010844 4.0e-40 170.2 316 42.7
Duzib187G0544 Durio zibethinus HOM05D012218 ORTHO05D010844 2.2e-17 94.7 256 38.7
Manes.05G184500 Manihot esculenta HOM05D012218 ORTHO05D010844 1.2e-15 89.0 231 42.0
Cpa.g.sc37.40 Carica papaya HOM05D001512 ORTHO05D001574 2.9e-14 84.3 241 37.8
FAN28G1165 Fragaria x ananassa HOM05D012473 ORTHO05D010844 1.9e-13 81.6 210 40.0
Cfa001988 Carpinus fangiana HOM05D012473 ORTHO05D010844 4.2e-13 80.5 172 40.7
Dinv07458 Davidia involucrata HOM05D010873 ORTHO05D013124 7.2e-13 79.7 176 41.5
Gorai.012G037100 Gossypium raimondii HOM05D012218 ORTHO05D010844 9.4e-13 79.3 359 29.2
Actinidia06596 Actinidia chinensis HOM05D010873 ORTHO05D013124 1.6e-12 78.6 186 37.6
QL10p005044 Quercus lobata HOM05D012473 ORTHO05D010844 1.6e-12 78.6 160 43.1
TWI31G0860 Tripterygium wilfordii HOM05D012218 ORTHO05D010844 2.7e-12 77.8 167 41.9
Gohir.A05G382500 Gossypium hirsutum HOM05D012218 ORTHO05D010844 3.6e-12 77.4 499 25.3
ClCG01G004750 Citrullus lanatus HOM05D036858 ORTHO05D010844 6.1e-12 76.6 188 36.7
Gohir.D04G032700 Gossypium hirsutum HOM05D012218 ORTHO05D010844 3.9e-11 73.9 503 26.4
Thecc.01G142200 Theobroma cacao HOM05D012218 ORTHO05D010844 6.7e-11 73.2 531 24.7
CiPaw.03G115200 Carya illinoinensis HOM05D012218 ORTHO05D010844 1.5e-10 72.0 337 31.5
FAN19G1264 Fragaria x ananassa HOM05D012473 ORTHO05D010844 3.3e-10 70.9 450 33.1
AUR62003591 Chenopodium quinoa HOM05D030946 ORTHO05D010844 5.7e-10 70.1 119 42.0
FvH4_1g25520 Fragaria vesca HOM05D012473 ORTHO05D010844 1.3e-09 68.9 449 32.7
Sc09g0002200 Simmondsia chinensis HOM05D030946 ORTHO05D010844 1.3e-09 68.9 180 37.8
Haze_16528 Corylus avellana HOM05D012473 ORTHO05D010844 1.7e-09 68.6 487 28.5
Aa31LG1G18120 Aethionema arabicum HOM05D009813 ORTHO05D011936 2.2e-09 68.2 162 33.3
AL8G40940 Arabidopsis lyrata HOM05D009813 ORTHO05D011936 1.4e-08 65.5 159 41.5
QL02p071969 Quercus lobata HOM05D012473 ORTHO05D010844 2.4e-08 64.7 163 34.4
Potri.007G098300 Populus trichocarpa HOM05D012218 ORTHO05D017165 3.1e-08 64.3 217 34.6
MELO3C005461.2 Cucumis melo HOM05D036858 ORTHO05D010844 4.1e-08 63.9 156 30.1
EL10Ac4g09661 Beta vulgaris HOM05D030946 ORTHO05D010844 2.0e-07 61.6 439 27.8
Sp2g26820 Schrenkiella parvula HOM05D009813 ORTHO05D011936 3.4e-07 60.8 156 34.6
Rhsim10G0129700 Rhododendron simsii HOM05D017996 ORTHO05D017165 5.9e-07 60.1 341 29.6
TAR381G1694 Trochodendron aralioides HOM05D012218 ORTHO05D010844 2.9e-06 57.8 321 28.3
AUR62000557 Chenopodium quinoa HOM05D030946 ORTHO05D010844 8.5e-06 56.2 73 45.2
Thhalv10029311m.g Eutrema salsugineum HOM05D009813 ORTHO05D011936 8.5e-06 56.2 207 33.3


User provided reference genes

Program Settings