Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.9IC8RT Arachis hypogaea HOM05D000533 ORTHO05D002807 8.0e-79 297.0 144 100.0
arahy.Tifrunner.gnm1.ann1.U57TMC Arachis hypogaea HOM05D000533 ORTHO05D002807 1.3e-17 93.6 47 91.5
arahy.Tifrunner.gnm1.ann1.RBM67I Arachis hypogaea HOM05D000533 ORTHO05D002807 3.9e-17 92.0 47 89.4
Lalb_Chr07g0191841 Lupinus albus HOM05D001070 ORTHO05D002096 5.1e-17 91.7 65 67.7
PGR111G0057 Punica granatum HOM05D001070 ORTHO05D002096 6.6e-17 91.3 81 54.3
arahy.Tifrunner.gnm1.ann1.CXW88U Arachis hypogaea HOM05D000533 ORTHO05D002807 1.1e-16 90.5 47 87.2
EL10Ac1g02291 Beta vulgaris HOM05D000533 ORTHO05D002807 1.5e-16 90.1 47 87.2
EL10As15g24098 Beta vulgaris HOM05D000533 ORTHO05D002807 1.5e-16 90.1 47 87.2
Lsat_1_v5_gn_4_118121 Lactuca sativa HOM05D000533 ORTHO05D002807 1.5e-16 90.1 48 85.4
MBI10_g47589_MAGBIO Magnolia biondii HOM05D000533 ORTHO05D001069 1.5e-16 90.1 46 87.0
Sed0004290 Sechium edule HOM05D000533 ORTHO05D002807 1.5e-16 90.1 47 87.2
Sed0023589 Sechium edule HOM05D000533 ORTHO05D002807 1.5e-16 90.1 47 87.2
Sed0023659 Sechium edule HOM05D000533 ORTHO05D002807 1.5e-16 90.1 47 87.2
BraSC58t46464Z Brassica rapa HOM05D000533 ORTHO05D002807 2.5e-16 89.4 51 76.5
CAN.G1045.10 Capsicum annuum HOM05D000533 ORTHO05D002807 2.5e-16 89.4 47 85.1
CAN.G1298.18 Capsicum annuum HOM05D000533 ORTHO05D002807 2.5e-16 89.4 47 85.1
CAN.G1526.1 Capsicum annuum HOM05D000533 ORTHO05D002807 2.5e-16 89.4 47 85.1
CsaV3_1G022940 Cucumis sativus L. HOM05D000533 ORTHO05D002807 2.5e-16 89.4 47 85.1
DCAR_032541 Daucus carota HOM05D000533 ORTHO05D002807 2.5e-16 89.4 47 85.1
Migut.D01249 Erythranthe guttata HOM05D000533 ORTHO05D002807 2.5e-16 89.4 47 85.1
Gohir.A10G063750 Gossypium hirsutum HOM05D000533 ORTHO05D002807 2.5e-16 89.4 47 85.1
Lju5009P0T26 Lonicera japonica HOM05D000533 ORTHO05D002807 2.5e-16 89.4 47 85.1
Medtr4g006100 Medicago truncatula HOM05D000533 ORTHO05D001069 2.5e-16 89.4 47 85.1
Medtr4g050810 Medicago truncatula HOM05D000533 ORTHO05D006151 2.5e-16 89.4 47 85.1
Medtr6g042200 Medicago truncatula HOM05D000533 ORTHO05D001069 2.5e-16 89.4 47 85.1
Medtr7g021700 Medicago truncatula HOM05D000533 ORTHO05D006151 2.5e-16 89.4 47 85.1
Nn1g00560 Nelumbo nucifera HOM05D000533 ORTHO05D002807 2.5e-16 89.4 47 85.1
Peaxi162Scf00030g02119 Petunia axillaris HOM05D000533 ORTHO05D006151 2.5e-16 89.4 47 85.1
Peaxi162Scf00269g01411 Petunia axillaris HOM05D000533 ORTHO05D006151 2.5e-16 89.4 47 85.1
PGR111G0022 Punica granatum HOM05D000533 ORTHO05D002807 2.5e-16 89.4 47 85.1
Solyc00g500041.1 Solanum lycopersicum HOM05D000533 ORTHO05D002807 2.5e-16 89.4 47 85.1
Solyc00g500086.1 Solanum lycopersicum HOM05D000533 ORTHO05D002807 2.5e-16 89.4 47 85.1
Solyc00g500123.1 Solanum lycopersicum HOM05D000533 ORTHO05D002807 2.5e-16 89.4 47 85.1
Solyc00g500193.1 Solanum lycopersicum HOM05D000533 ORTHO05D002807 2.5e-16 89.4 47 85.1
Gohir.D05G308833 Gossypium hirsutum HOM05D000533 ORTHO05D002807 3.3e-16 89.0 47 83.0
SalBow1G0006 Salvia bowleyana HOM05D000533 ORTHO05D002807 3.3e-16 89.0 47 83.0
ATCG01100 Arabidopsis thaliana HOM05D000533 ORTHO05D002807 4.3e-16 88.6 47 80.9
C09p40310 Brassica napus HOM05D000533 ORTHO05D002807 4.3e-16 88.6 47 80.9
BolC9t56913H Brassica oleracea HOM05D000533 ORTHO05D002807 4.3e-16 88.6 47 80.9
BolSC29t60509H Brassica oleracea HOM05D000533 ORTHO05D002807 4.3e-16 88.6 47 80.9
BolSC29t60549H Brassica oleracea HOM05D000533 ORTHO05D002807 4.3e-16 88.6 47 80.9
BolSC35t60689H Brassica oleracea HOM05D000533 ORTHO05D002807 4.3e-16 88.6 47 80.9
BolSC35t60707H Brassica oleracea HOM05D000533 ORTHO05D002807 4.3e-16 88.6 47 80.9
BolSC44t60825H Brassica oleracea HOM05D000533 ORTHO05D002807 4.3e-16 88.6 47 80.9
BolSC47t61062H Brassica oleracea HOM05D000533 ORTHO05D002807 4.3e-16 88.6 47 80.9
BolSC49t61146H Brassica oleracea HOM05D000533 ORTHO05D002807 4.3e-16 88.6 47 80.9
BraSC103t45432Z Brassica rapa HOM05D000533 ORTHO05D002807 4.3e-16 88.6 47 80.9
BraSC138t45532Z Brassica rapa HOM05D000533 ORTHO05D002807 4.3e-16 88.6 47 80.9
BraSC143t45657Z Brassica rapa HOM05D000533 ORTHO05D002807 4.3e-16 88.6 47 80.9
CARHR282470 Cardamine hirsuta HOM05D000533 ORTHO05D002807 4.3e-16 88.6 47 80.9
HanXRQChr00c0289g0573151 Helianthus annuus HOM05D000533 ORTHO05D002807 4.3e-16 88.6 47 85.1
HanXRQChr00c0336g0573691 Helianthus annuus HOM05D000533 ORTHO05D002807 4.3e-16 88.6 47 85.1
HanXRQChr02g0059741 Helianthus annuus HOM05D000533 ORTHO05D001069 4.3e-16 88.6 47 85.1
HanXRQChr09g0258481 Helianthus annuus HOM05D000533 ORTHO05D001069 4.3e-16 88.6 47 85.1
HanXRQChr15g0465421 Helianthus annuus HOM05D000533 ORTHO05D001069 4.3e-16 88.6 47 85.1
HanXRQChr15g0465471 Helianthus annuus HOM05D000533 ORTHO05D001069 4.3e-16 88.6 47 85.1
HanXRQChr17g0569711 Helianthus annuus HOM05D000533 ORTHO05D001069 4.3e-16 88.6 47 85.1
HanXRQChr17g0569761 Helianthus annuus HOM05D000533 ORTHO05D001069 4.3e-16 88.6 47 85.1
HanXRQCPg0580331 Helianthus annuus HOM05D000533 ORTHO05D001069 4.3e-16 88.6 47 85.1
Lsat_1_v5_gn_8_62921 Lactuca sativa HOM05D000533 ORTHO05D002807 4.3e-16 88.6 47 85.1
LjContig00318g0007609 Lotus japonicus HOM05D000533 ORTHO05D002807 4.3e-16 88.6 47 85.1
LjContig00319g0005103 Lotus japonicus HOM05D000533 ORTHO05D002807 4.3e-16 88.6 47 85.1
PSO548G0012 Papaver somniferum HOM05D000533 ORTHO05D002807 4.3e-16 88.6 47 85.1
Psat1g104920 Pisum sativum HOM05D000533 ORTHO05D002807 5.6e-16 88.2 47 83.0
Psat7g150960 Pisum sativum HOM05D000533 ORTHO05D001069 5.6e-16 88.2 47 83.0
Solyc11g021230.1 Solanum lycopersicum HOM05D000533 ORTHO05D002807 1.3e-15 87.0 47 80.9
FAN01G0230 Fragaria x ananassa HOM05D000533 ORTHO05D002807 1.6e-15 86.7 47 80.9
MBI10_g47594_MAGBIO Magnolia biondii HOM05D000533 ORTHO05D001069 1.6e-15 86.7 45 84.4
AL9U11959 Arabidopsis lyrata HOM05D000533 ORTHO05D002807 2.1e-15 86.3 47 78.7
Nn1g07318 Nelumbo nucifera HOM05D000533 ORTHO05D002807 2.1e-15 86.3 44 88.6
MELO3C000179.2 Cucumis melo HOM05D000533 ORTHO05D002807 2.8e-15 85.9 44 86.4
Sc25g0002030 Simmondsia chinensis HOM05D001070 ORTHO05D002096 2.8e-15 85.9 71 53.5
Gorai.009G395200 Gossypium raimondii HOM05D000533 ORTHO05D002807 6.2e-15 84.7 47 80.9
QL93p0141_0004 Quercus lobata HOM05D001070 ORTHO05D010233 2.4e-14 82.8 72 54.2
EL10As15g24139 Beta vulgaris HOM05D000533 ORTHO05D002807 5.3e-14 81.6 47 80.9
GSVIVG01029582001 Vitis vinifera HOM05D001070 ORTHO05D010233 5.3e-14 81.6 62 58.1
BraSC59t46556Z Brassica rapa HOM05D001070 ORTHO05D005132 9.0e-14 80.9 109 39.4
Gorai.010G119900 Gossypium raimondii HOM05D001070 ORTHO05D010233 1.2e-13 80.5 68 52.9
C09p25520 Brassica napus HOM05D001070 ORTHO05D010233 1.5e-13 80.1 109 39.4
TPR.G31189 Trifolium pratense HOM05D000533 ORTHO05D002807 1.5e-13 80.1 50 74.0
Solyc11g050760.2 Solanum lycopersicum HOM05D000533 ORTHO05D002807 2.0e-13 79.7 47 76.6
SMO086G0018 Selaginella moellendorffii HOM05D000533 ORTHO05D002807 2.6e-13 79.3 44 79.5
CARHR060450 Cardamine hirsuta HOM05D000533 ORTHO05D002807 3.4e-13 79.0 48 70.8
BcaC04g20701 Brassica carinata HOM05D001070 ORTHO05D002096 4.5e-13 78.6 108 38.9
Gorai.012G102000 Gossypium raimondii HOM05D001070 ORTHO05D010233 7.6e-13 77.8 62 56.5
PSO210G2726 Papaver somniferum HOM05D001070 ORTHO05D010233 1.3e-12 77.0 79 49.4
PSO548G0067 Papaver somniferum HOM05D001070 ORTHO05D002096 1.3e-12 77.0 79 49.4
PSO357G0427 Papaver somniferum HOM05D001070 ORTHO05D010233 1.7e-12 76.6 76 51.3
Solyc02g080275.1 Solanum lycopersicum HOM05D000533 ORTHO05D002807 1.7e-12 76.6 39 87.2
ClCG11G009260 Citrullus lanatus HOM05D001070 ORTHO05D010233 2.9e-12 75.9 61 60.7
Sed0007463 Sechium edule HOM05D000533 ORTHO05D002807 4.9e-12 75.1 39 87.2
HanXRQChr01g0000271 Helianthus annuus HOM05D000533 ORTHO05D001069 1.9e-11 73.2 51 66.7
Gorai.006G095000 Gossypium raimondii HOM05D001070 ORTHO05D010233 3.2e-11 72.4 65 47.7
DCAR_032544 Daucus carota HOM05D001070 ORTHO05D002096 4.2e-11 72.0 66 47.0
HanXRQChr00c0703g0576931 Helianthus annuus HOM05D000533 ORTHO05D002807 4.2e-11 72.0 40 82.5
Migut.D01246 Erythranthe guttata HOM05D001070 ORTHO05D010233 7.1e-11 71.2 94 43.6
Psat0s1160g0360 Pisum sativum HOM05D000533 ORTHO05D006151 1.2e-10 70.5 37 83.8
Psat0s6989g0200 Pisum sativum HOM05D000533 ORTHO05D006151 1.2e-10 70.5 37 83.8
Psat3g095000 Pisum sativum HOM05D000533 ORTHO05D006151 1.2e-10 70.5 37 83.8
Psat6g140600 Pisum sativum HOM05D000533 ORTHO05D006151 1.2e-10 70.5 37 83.8
Sed0027483 Sechium edule HOM05D001070 ORTHO05D010233 2.1e-10 69.7 72 45.8
BraSC143t45654Z Brassica rapa HOM05D001070 ORTHO05D005132 3.5e-10 68.9 49 59.2
BraSC59t46531Z Brassica rapa HOM05D001070 ORTHO05D010233 3.5e-10 68.9 49 59.2
BolSC47t61061H Brassica oleracea HOM05D001070 ORTHO05D010233 6.0e-10 68.2 49 59.2
Nitab4.5_0004137g0040 Nicotiana tabacum HOM05D001070 ORTHO05D010233 1.3e-09 67.0 63 50.8
Solyc00g500088.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 1.3e-09 67.0 62 53.2
Solyc00g500125.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 1.3e-09 67.0 62 53.2
Solyc00g500191.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 1.3e-09 67.0 62 53.2
Solyc00g500324.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 1.3e-09 67.0 62 53.2
Glyma.18G155550 Glycine max HOM05D000533 ORTHO05D002807 1.8e-09 66.6 37 78.4
Ciclev10027640m.g Citrus clementina HOM05D001070 ORTHO05D002096 2.3e-09 66.2 56 55.4
Nn304s46233 Nelumbo nucifera HOM05D001070 ORTHO05D002096 3.0e-09 65.9 47 63.8
COL.COLO4_02137 Corchorus olitorius HOM05D000533 ORTHO05D002807 8.7e-09 64.3 46 58.7
Duzib256G0005 Durio zibethinus HOM05D001070 ORTHO05D002096 1.1e-08 63.9 53 49.1
Lsat_1_v5_gn_0_20081 Lactuca sativa HOM05D001070 ORTHO05D010233 1.5e-08 63.5 63 49.2
arahy.Tifrunner.gnm1.ann1.KIF45B Arachis hypogaea HOM05D000533 ORTHO05D002807 1.3e-07 60.5 30 86.7
PSO210G1984 Papaver somniferum HOM05D001070 ORTHO05D002096 1.3e-07 60.5 57 54.4
Nitab4.5_0004841g0070 Nicotiana tabacum HOM05D001070 ORTHO05D022991 2.8e-07 59.3 54 51.9
Eucgr.I00434 Eucalyptus grandis HOM05D001070 ORTHO05D010233 3.7e-07 58.9 71 42.3
HanXRQChr00c0504g0575311 Helianthus annuus HOM05D000533 ORTHO05D006151 4.8e-07 58.5 32 84.4
HanXRQChr00c0336g0573721 Helianthus annuus HOM05D001070 ORTHO05D010233 1.8e-06 56.6 49 53.1
HanXRQChr09g0258461 Helianthus annuus HOM05D001070 ORTHO05D010233 1.8e-06 56.6 49 53.1
HanXRQChr17g0569701 Helianthus annuus HOM05D001070 ORTHO05D005132 1.8e-06 56.6 49 53.1
HanXRQCPg0580321 Helianthus annuus HOM05D001070 ORTHO05D005132 1.8e-06 56.6 49 53.1
ScUNg0000260 Simmondsia chinensis HOM05D001070 ORTHO05D002096 2.4e-06 56.2 44 59.1
Gorai.008G099100 Gossypium raimondii HOM05D001070 ORTHO05D010233 4.0e-06 55.5 48 56.2
SalBow1G2240 Salvia bowleyana HOM05D001070 ORTHO05D005132 4.0e-06 55.5 128 35.2
Gohir.1Z049702 Gossypium hirsutum HOM05D000533 ORTHO05D002807 9.0e-06 54.3 27 85.2
Gohir.D12G091540 Gossypium hirsutum HOM05D001070 ORTHO05D010233 9.0e-06 54.3 48 56.2
Sabra10G0056200 Salix brachista HOM05D000533 ORTHO05D001069 9.0e-06 54.3 38 63.2


User provided reference genes

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